Embiotoca jacksoni (black perch): 138196555
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Entry
138196555 CDS
T10523
Symbol
thoc2
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja03013
Nucleocytoplasmic transport
eja03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138196555 (thoc2)
09122 Translation
03013 Nucleocytoplasmic transport
138196555 (thoc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eja03019
]
138196555 (thoc2)
03041 Spliceosome [BR:
eja03041
]
138196555 (thoc2)
Messenger RNA biogenesis [BR:
eja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
138196555 (thoc2)
Spliceosome [BR:
eja03041
]
Complex C
Other components
EJC/TREX
138196555 (thoc2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
138196555 (thoc2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Mucin
Motif
Other DBs
NCBI-GeneID:
138196555
NCBI-ProteinID:
XP_069002801
LinkDB
All DBs
Position
Unknown
AA seq
1564 aa
AA seq
DB search
MATPIVPGEWIKNWEKSGKHEFIQLCKELTEKTDHGSEIKDIQAALYELCWQVVQGNLKL
DLVASVLGDMMELRDDMPSILADVFSILDLETGALEEKNKRDHYTQLVGACLFFVPEAIL
KERLDPETIESLGLIKQAHQFNQKIVKIKTKLFYKQQKFNLLREENEGYAKLITELGQDL
SGNITSHLVLESIKSLIGCFNLDPNRVLDIILEVYESRSDQDEFFLSLIKSYMCEPLTLC
HILGFKFKFYQEPNEETPKSLYHIAAALLHHNLIELEDLYVHLMPPDVTIVEEHKRDISE
AKQIARKLVMVVLPSEKSEDKEKDKEKEEEKNEKPPDNQKLGLLEALLRIGDWHHAQSIM
DQMPSFYATSHKSIALALCQFVHLTVEPLYRRAGVPKGARGCVMNPLRSKRAPRPAETFD
DLRRDTFSMLCYLGPHLSHDPILFAKIVRLGKGFMKEYQSDGRSEVKDKMETLLSCFLSI
ADQVLLPSLSLMECNACMSEELWGLFKLFPYQHRYRLYGQWKNETYSSHPLLVKVKAQTV
ERAKYIMKRLTKENVKQSGRQIGKLSHSNPTILFDYMLSQIQWYDNLIVPVVDSLKYLTS
LNYDVLAYCIIEALANPEKEKMKHDDTTISSWLQSLASLCGAVFRKYPIELAGLLQYVTN
QLKAGKSFDLLILKEVVQKMAGIEITDEMTSEQLEAMTGGEQLKAEGGYFGQIRNTKKSS
QRLKDALLDHELALPLCLLMAQQRNGVVFLEGGEKHLKLVGHLYDQCHDTLVQFGGFLAS
NLSTEDYIKRVPSIDILCNQFHTPHDAAFFLSRPMYAHQILSKYDELKKAEKGNRQQQKV
HKYVAACEQVMTPVHEAVVSLHPARVWDDLRPQFYATFWSLTMYDLAVPHSAYEREVNKL
KVQIKAIEENPETPLNKKKKEKERCTALQEKLQEEEKKQLEHVQRVLHRLKLEKDNWLLA
KSTKNETITKFLQLCLFPRCIFSSIDAVYCARFVELVHQQKTPNFCTLLCYDRVFSAIIY
TVASCTENESHRYGRFLCCMLETVTRWHSDRAVYEKECVNYPGFLTIFRATGFDGGNKAD
QLDYENFRHVVHKWHYMLTKASVHCLETGDYTHIRNILIVLTKILPCYPKVLNLGQALEC
RVHKICLEEKDKRPDLYALAMGYSGRLKSQKVHMVPENEFHHKEQPARSATPASQQNGPG
STGKPATSTTKTEEGTLEDGDRSKDKSQGTTKPVNKANSATAKVTTSNGNGALNSTKAVK
ERDDKEKSGKEKKEKKEKTPGSTPETKAENRREKQRDERAGKEERAAREGKEKTPKADRE
KVKPDEKSCKDDKAKAGNGEPMDPSRERDAMKESKSKDKGDRSAVAVSIKSPGPRSESAE
SERDHKRRKLDSHSSPSHSSSVKDNNNEPKESTSKHHISYNSVARSKSREREMEKKDSEN
TQGRSKEKKEEKDRKDRKRDHAVNDRETSQESKRRKDENGTNSSKNSKSTSPSCDSPLSA
EKEKSKRSKSSSKEKAESVKPERTSSGGKKESRHDKEKSEKKEKRDSSGGKEEKKHHKSS
DKHR
NT seq
4695 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacctatagtccccggtgaatggatcaaaaactgggaaaaatcaggaaaacac
gagttcattcaactctgcaaagaacttacagagaaaacagaccatggaagtgaaattaaa
gacatacaggccgccttatacgagctctgctggcaagttgtacaggggaacctgaagttg
gatcttgtcgccagcgtccttggggacatgatggaactccgagacgacatgccttcgatt
ttagcagatgtgttcagtatactagatttagagactggtgcactggaagaaaagaacaaa
cgtgaccattacacacaattggtgggagcatgtttgttttttgtaccggaggccattctg
aaggagcgtctagatccagaaacaatcgaatcactcggactcatcaagcaagcccatcag
tttaatcagaagattgtaaaaatcaagactaaactattttacaagcagcagaagtttaac
ttgctaagagaggagaatgagggctatgccaaactcatcacagagcttggacaagacctg
tctggcaacatcacgagccacctcgtcctggagagcatcaagtccctcataggatgtttc
aacttggaccctaatcgtgttttggacataatcttggaggtatacgagagtcggtctgac
caagatgagttcttcctgtccctcatcaagtcctacatgtgtgaacctctcacactctgc
cacattctgggctttaagtttaagttctaccaggagcccaatgaagaaacccccaagtca
ctttaccacattgctgctgctctgcttcaccataacctgatagagctggaagatctctac
gtacatctgatgccaccagatgtcaccatcgtagaggaacacaaacgagatatctccgag
gccaagcagattgcacgcaagttggttatggttgtgttgccctctgagaaaagtgaagac
aaagaaaaggacaaagagaaggaagaggagaagaacgagaagccacctgataatcagaag
ctcggtttgttggaagcgctacttaggattggagactggcaccacgcccagagtattatg
gaccagatgccttccttctatgctacttctcacaagtccattgcgctggcactctgccag
tttgtgcacctgactgtggagcctctttacagaagggctggcgtcccaaaaggggcaaga
ggatgtgtaatgaatccactgaggagcaagcgggcccctcgccctgcagagacctttgac
gacctccgcagggacacattcagcatgctctgctacttgggccctcacctctcccatgac
cccatcctctttgctaagattgtgcgtctgggcaagggcttcatgaaagagtatcaaagt
gatggtagatctgaggtcaaagacaagatggaaacattattgagttgtttcctgagcatt
gcagaccaggtgctgctcccgtcgctctctctgatggagtgtaatgcttgcatgtccgag
gaactgtggggtctcttcaaactctttccctaccagcacaggtaccggttgtatgggcag
tggaaaaatgagacatattccagccatccgctgttggttaaagtcaaagctcagactgtg
gagagggccaaatacattatgaagcggttgaccaaagagaatgtgaaacaatctggaagg
cagattggcaagctgagccacagcaatcccaccatcctctttgattatatgctgtctcag
atccaatggtacgacaacctcatcgttccggtggtggactccttgaaatacctcacatcg
ctcaactatgatgtcttggcttattgcatcattgaggctctggccaacccggagaaggag
aagatgaagcatgatgacaccaccatctcctcgtggctgcagagcttggcaagtctgtgc
ggagccgtgttcagaaaatacccaattgagttggcaggcctccttcagtatgtcaccaat
cagctaaaggcagggaagagttttgacctgctgatcctgaaagaggtggtgcagaaaatg
gctggcattgagatcacagatgagatgacctcagagcagctagaggccatgacaggaggg
gagcaactcaaagcagagggcggctactttggtcagatcaggaacactaaaaagtcctca
cagcgtctgaaggatgcgctgctggaccacgaactcgccctgccattgtgtctactcatg
gctcagcaacgaaatggtgtggttttcttagagggtggagagaaacacctcaaacttgtc
ggccacctctatgaccagtgtcatgacacattggtgcagtttgggggctttctggcctcc
aacctcagcacagaggactacatcaagcgggttccctccatcgacatcctttgtaaccag
tttcacactccacacgatgctgcgttcttcctgtctcggccgatgtacgcccatcagatt
ttgtcgaagtacgatgagctgaagaaggcagaaaaaggcaaccggcagcagcagaaggtc
cacaagtacgtggcggcctgtgaacaggttatgacgccggtacatgaagctgtggtatct
ctccacccggcccgggtctgggatgatctccgccctcagttctacgccaccttctggtcc
ctcaccatgtacgacttggccgtgccgcattccgcctacgagcgtgaggtcaacaagctc
aaggtccagatcaaggccatcgaggagaaccctgagacgcctctgaataagaaaaagaag
gagaaggaacgctgcaccgctctgcaggaaaaactccaggaggaggagaagaagcagctg
gagcacgtccaaagagtactacaccgcctgaaactggagaaagacaactggttgttggcc
aaatcgacaaagaacgagaccatcacaaagttcctgcagctctgtctgttccctcgctgc
atcttctcctccattgatgccgtctactgtgcccgcttcgtcgaactggtccatcagcag
aagacacccaacttctgcaccctcctgtgctatgacagggttttctctgcgatcatctac
actgtggccagctgtacggagaatgagtctcaccgctacggacgcttcctctgctgcatg
ctggagacggtgacacgttggcatagcgaccgtgcagtctatgagaaggagtgtgtcaat
taccccggcttcctgaccatcttcagagccacaggctttgatggagggaacaaagctgac
caacttgactacgaaaacttcaggcatgtggtgcataaatggcactacatgttgactaaa
gcttcagtccactgcctggaaacgggagattacacccacatccggaacattctcatcgtg
cttaccaagatcctgccctgctacccaaaggtcctgaacttgggccaagcgctggagtgc
cgcgtccacaagatctgcctcgaggagaaggataagaggcctgacctctatgccttagca
atgggttattcaggtcggttgaaaagccagaaggtgcacatggtccctgagaatgagttt
caccacaaggagcagccggcacgcagcgcgacccccgccagtcaacagaatggccccggc
agcacaggcaagcccgccaccagcacaaccaagacagaggaggggacgttggaggatggc
gatcggagcaaggataaatctcagggcaccacaaagccagtgaacaaagccaacagtgca
acagccaaagtaaccaccagcaacgggaacggtgctctcaacagcaccaaagctgtcaaa
gagcgggacgacaaagagaagagcgggaaggagaaaaaagagaaaaaggaaaagacacca
ggcagcactcccgagacaaaggcggagaaccgtcgggagaagcagagagacgagagagcg
gggaaggaggagcgagcggctcgcgagggtaaggagaagacccccaaggccgacagggag
aaagtgaagccagacgagaagagctgcaaagacgacaaggccaaagccggaaacggagag
cctatggatccgtccagggagcgtgacgccatgaaggagtccaagagcaaggacaaagga
gacaggagtgctgtggctgtgtccatcaagtcaccaggtcccagatcagagtcggctgaa
tccgagagggatcacaaaagacgaaagctcgacagtcactcttccccgtcccactcctcg
tctgttaaggacaataacaacgaacccaaggaatccacatccaagcaccacatcagctac
aattcagttgcccggtccaagagccgagagagggagatggagaagaaagattcagagaac
acacaaggccggtccaaagagaagaaggaagaaaaggatcgcaaagacaggaagagagac
cacgctgtcaacgaccgtgagacgagtcaagaatccaaacgcagaaaggatgagaatgga
accaactcttcgaaaaacagcaagagcacaagtccttcctgcgactccccactgtccgct
gaaaaggagaagagcaaaaggtccaaatcatccagtaaagagaaggccgagtctgtgaaa
cctgagcgaacgtcctccggaggcaaaaaggagtccagacacgacaaagagaagtctgaa
aagaaagagaagagggacagcagcggaggaaaagaagagaaaaagcatcataaatcttct
gacaagcacagataa
DBGET
integrated database retrieval system
