KEGG   Embiotoca jacksoni (black perch): 138196583
Entry
138196583         CDS       T10523                                 
Symbol
brwd3
Name
(RefSeq) LOW QUALITY PROTEIN: bromodomain and WD repeat-containing protein 3
  KO
K11798  bromodomain and WD repeat domain containing protein 1/3
Organism
eja  Embiotoca jacksoni (black perch)
Brite
KEGG Orthology (KO) [BR:eja00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:eja04121]
    138196583 (brwd3)
Ubiquitin system [BR:eja04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     138196583 (brwd3)
SSDB
Motif
Pfam: WD40 WD40_Prp19 Bromodomain WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_EML_2 WDR55 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_RIG_2nd NBCH_WD40 ANAPC4_WD40 Beta-prop_DCAF12 WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_DCAF4 Auxin_resp Beta-prop_VPS8
Other DBs
NCBI-GeneID: 138196583
NCBI-ProteinID: XP_069002858
LinkDB
Position
Unknown
AA seq 1825 aa
MARERCSQTESELYYLITRFLQSGPCKKAAQILTEELEEYELVPQRWSWDGKKYKRTFRD
WVILNEHIPADYLLRVCQRIGPLIEKEIPPSVPGVQTLLGLGKQSLLRTTKSCSHKVCRG
TAVAALHRGRPPEPPVSNGNAPNVVSIMGARQATATARFGQALPSSSYQHMKIHKRILGH
LSSVYCVAFDRTGRRIFTGSDDCLVKIWATDDGRLLATLRGHSAEICDMAVNHENSLIAS
ASCDKTIRVWCLRTCAPITVLQAHAASITSIQFCPAVKGTTRYLASTGADGMVCFWKWHS
LSMKFNDQPVKFVERSRPGVQVSTSSFSSGGMFMATGGTDHTIRVYYLGAETPMKVSEMD
AHTDKVVVVQFSNNSDSLRFVSGSRDGTARIWHYQQQEWKSVTLDMAARLPGSAAATGDD
KTKLVVTMVAWDRADTTIITAVSNYLLKVWSATSGQLLHILSGHDDEVFVMEAHPFDSRI
MLSAGHDGNINIWDLSKGAKIRNFFNMIEGQGHGAIYDCKFSADGQHFACTDSHGHLLIF
GFGCSRPYEKIPDQMFFHTDYRPLIRDANNYVLDEQTQQAPHLMPPPFLVDIDGNPHPPL
YQRLVPGRENCKEDQLIPQLGYMANSDGELVEQVLGQQTAENSESLLDNLIRQLQEEQDE
QQDVEPQAEGEEAGDAAEIMASSPAAETRRSGQVDGVWQMQHNALPSQVATERDLLAWSR
RVVVTEVPQGTSRVSEECRRAKGDMECSLYNVERRKKPVTCASKSDLMATRLRSLRPTKK
KKQQRHTYQTRSAQVRRPRNRSRNSSSRRNSDSQMESDSDGDAAEQVQQNEASSDGEARW
QSESSSSDSSSEYSDWTADAGINLQPPKRPTRRPVQSVGYSSSEEEEGGNEAKEAKKRET
EKRKKPKETKQKPTSSLAGLDAEEWLPPSWIMETIPRRSPFVPQMGDELIYFKQGHQAYV
RAVRKAKAYSINPQKQPWNRLNLRDQESVKVVGIKYEVGPPTLCCLKLALLDPVSGKMTN
ESFSLKYHDMPDVIDFLVLQQFYNEAKEHNWQPGMRFRSIIDNAWWFGSVEDQEPLQLEY
PDSLFQCYAVKWDNGEREKMSPWDMEPIPEEAALPEQVGDGVEVAEEEIMALLYSPQEGE
WGAHTRDEDCERVIHGIDQLQTLDVAKAFALPVNLRDYPLYCTVVAYPTDLSTVRKRVEN
RFHRRISALMWEVRYIEHNARTFNEPQSPIVAAAKVVTDVLLHYIGDQSCTDILDLYRRM
KSEVSSGGEAEIDLDVDSDTPGTSTGHRGSNSNSAKRGVVLDVKVWRGQCRELLRRMTVS
SDSEPFRQPVDLFEYPDYRDIIDTPMDLSTVSETLLVGNYENPMEFAKDIRLIFSNSKAY
TPNKKSQIYTMTLSLSAFFEKHIISIMSDYKSAIQNERRTRQRLNYRDRLHNGGSSPPNS
PSPSPKGKHKSGKPKKSQSSTKNRSQRLCQVQQSSSVAEEEDMQPSSPSSGTSVESSNQE
PQRVTRSQATPVKKSGRRRNVHLSNGSKQHHGRDESDNDEEASGSNSSSSDSSSSSSSSS
SSSSSDSENSSESEMEKFVEGGDHDYSKAPCLSVCVAAKGKMAASGKRRHKGGEDMTPGP
KRARVQLPVPEEEEEEEEEEEDEEEAQEEDEEEEEDEEEEEEEEEEEEEEEEGEQQQQQQ
QQQQQVDVRHEEGEEEEEDEEEEEEEPEEEEEPXEEEEEEEEEEEEDDDNNSDEVQRGAA
AAAAAAAAAAAAAAAAVSSPRGHQVKSRRVNTRNQGRRTVLYRDESEDDGHGSKEDPLNL
GRSRSGRVRRMTEKARVSHLMGWGH
NT seq 5478 nt   +upstreamnt  +downstreamnt
atggcgagagagcggtgttcacagaccgagtcggaactgtattacctcatcaccagattc
ctgcagtccggaccttgtaaaaaagcagcacagatcctgacggaggagctggaggagtac
gagttggttccgcaacgatggagttgggacgggaagaagtacaaacgcaccttccgagac
tgggtgattttgaacgagcacattcctgcggactatctgctccgtgtttgccagcggata
ggcccgctcatagagaaggagatcccacctagtgttcccggggtccaaacactccttggg
ctgggaaaacagtccctgctacgtacaaccaaaagttgtagccacaaagtatgcaggggc
acagctgtcgctgcactccatcgaggacgtcctccagaacctccagtcagcaatggaaat
gctccgaatgttgtgtccatcatgggtgctcgccaggccacagccactgctcgctttggc
caggccctaccgtcttcctcctaccaacacatgaagatacacaaacgtatcctaggtcac
ctttcttcagtgtactgtgtagcctttgaccgcaccggtcgtcggatatttacgggttct
gatgactgcctggtgaaaatctgggccacggatgacggccggctcctggcaacactccgc
ggccactcagcagagatctgcgacatggctgtcaaccacgagaacagtctcatcgcctcg
gccagctgtgacaaaaccatcagagtatggtgcctccgcacctgtgcgcccatcactgtt
ctgcaggcccatgctgcctccatcacatccatacagttttgtcctgcagtcaaagggaca
acgcgatacctggcctcaacaggtgcagacggcatggtgtgtttctggaagtggcactca
ctcagcatgaagttcaatgatcaaccagtgaagtttgttgagcgttcacgtccgggagta
caagtctccacttcctctttcagcagtggtggcatgttcatggctaccgggggcacagac
cacacgatcagggtctactatcttggtgctgaaactccaatgaaggtttcggagatggat
gctcacacggataaagttgtagtcgtccagtttagcaacaacagtgacagcctaaggttt
gtgagcggcagtcgtgacggcacagccaggatctggcattaccagcaacaagagtggaaa
agtgtcactttggacatggctgcaaggctgcccgggagcgctgctgccactggggatgat
aaaaccaagctggtggtgaccatggtggcctgggatcgagcggacaccaccatcatcaca
gcggtgtcaaactacctgctcaaagtttggagcgcaacgtcaggacagctgttgcacatt
ttgtctggtcatgatgacgaggtgtttgtgatggaggctcacccctttgactctcgcatc
atgttatctgccggccacgatggcaacattaacatctgggatctgagcaaaggagccaag
atccgcaatttcttcaacatgattgagggccagggccatggtgctatttatgactgcaag
ttctcagctgatgggcaacattttgcctgcactgactcacatggccatttgctcatcttt
ggcttcggttgcagcagaccatatgagaagattcctgaccagatgttcttccacacggac
taccgacctctcattcgcgacgctaataactacgtcctggacgagcagacgcaacaggcc
ccccatctcatgcctccacccttcctggtggatatcgatgggaaccctcatcctcctctc
taccagcgcttggtgccaggaagagagaactgcaaggaggaccagctaatacctcagcta
ggatacatggcaaacagtgatggagagttggttgagcaggtacttggccagcaaacggca
gaaaattccgaaagcctattggacaatctcatcagacagctgcaggaggagcaggacgag
cagcaggacgtagaaccgcaggccgaaggggaagaagctggtgacgcagcagagataatg
gcttcttccccagcggccgaaactcgcagaagtgggcaggtggatggggtgtggcagatg
cagcataatgcccttcctagtcaagtggccacggagagggacctgctggcctggagccgc
agagtggtggttactgaagtgccacaagggacatccagagtttctgaggagtgcagacga
gccaaaggcgacatggaatgttctctttacaatgtagagaggaggaagaaaccggtaacc
tgcgcatccaagagcgacctgatggctacccgtctgcgctccctgcggccgaccaaaaaa
aaaaagcagcagcgccacacctatcaaacccgctcagctcaagtccgccgtcccagaaac
aggagtcgaaactccagcagccgacgtaactctgacagccagatggaatcagacagcgat
ggagatgcagcagaacaggtgcagcaaaacgaagcctcctctgatggtgaagctcggtgg
cagagtgaaagcagctccagtgactcctccagtgaatattctgattggacagccgatgct
gggatcaacctccagccaccgaagcgaccaaccaggaggcctgtacagtccgtgggttac
agcagctctgaggaggaagaaggcggaaacgaggccaaggaggcaaagaaaagggaaact
gagaagaggaagaagcccaaggagaccaaacagaaacccacgtcctctctggctggactc
gatgcggaggagtggctgccaccatcgtggataatggagaccatcccacgccgctctcct
tttgttccacaaatgggagatgaactcatctacttcaagcagggccatcaggcctacgtc
cgggcggttcgcaaggccaaggcctacagcatcaaccctcagaaacagccgtggaacaga
ctcaacctcagggaccaggaatctgtgaaggtggttggaattaaatatgaagtgggacct
cccaccctctgctgcctaaagctggctctcttggatccagtctcagggaagatgaccaat
gagtctttctccttaaagtatcatgacatgccagatgtcattgattttctggtactgcag
cagttttacaacgaggctaaagagcacaactggcagccaggtatgaggttccgcagcatc
attgacaacgcctggtggttcggatctgtggaggatcaggagccgctgcagctggagtat
ccagacagcctgtttcagtgctatgcagtaaagtgggataatggtgagcgggagaaaatg
agtccctgggatatggagcctattcctgaggaagctgcgctgccagaacaggtcggtgat
ggggtggaggtggcagaagaggagatcatggctctgctctacagccctcaagaaggagaa
tggggggctcacactcgagatgaagactgtgagcgagtcatccatggcatcgatcagctc
cagacactagatgtagccaaagcattcgctttaccggtaaacctgcgggactaccctctg
tactgtactgtggtggcttaccccactgacctcagcaccgtccgcaaacgagtggagaat
cgctttcacaggcggatctctgcattaatgtgggaggtgcgttacattgaacacaatgcc
cgcactttcaatgaaccccaaagccccattgtagctgctgccaaggtggtgacggatgtt
ctcctccactacattggggaccagagctgcacagacatcttggatctgtatcgcagaatg
aagtcagaggtcagcagtggaggagaagctgagattgacctggatgtggactccgacact
ccagggacttctacaggacatcggggatccaactcaaattctgcaaagcgcggtgtggtt
ttggatgtgaaagtatggcgaggtcaatgtcgagagctgttgcgtcgaatgactgtctcc
tcggattcagaaccattcagacagcctgtggatctctttgagtatccggactatcgagac
atcatcgacactcccatggatctgtccacagtgtcagagacgctgctagtggggaactat
gaaaatcccatggagtttgccaaagacatccgcctcattttcagcaactctaaagcatac
acacccaacaagaagtcacagatctataccatgaccctcagtttgtcggccttcttcgaa
aaacacatcatctccatcatgtcggactacaaatctgccattcagaacgaacggcggacc
cgtcagagactcaattacagggatagattgcacaacggaggcagctcgccgcctaacagt
ccatcgcccagcccaaaagggaagcacaagtcagggaaaccaaaaaaatcccagagctca
acgaagaatcggtctcagagactatgtcaggttcagcaaagcagcagtgtagcagaggaa
gaagatatgcagccttcttctccaagttcagggacaagcgtcgagagcagtaatcaagag
ccccagcgggtgacccgcagccaggctactccagtgaagaagtcagggcgccggcgtaac
gtccatctaagcaacggctccaaacagcaccacggccgagacgagtccgacaacgacgag
gaggcatccgggtccaacagctcctcatcggactcgtcctcctcttcgtcgtcttcctct
tcgtcctcgtcgtccgacagcgagaacagctcagagtctgagatggagaagttcgtggag
ggaggagatcacgactacagcaaagccccctgcttgtcggtgtgcgtcgcagcgaagggc
aagatggcggcctcagggaaaaggagacacaaaggaggagaggacatgacgcctggaccg
aaaagagcacgagtccagctgccggtaccggaggaggaagaggaggaggaggaggaggag
gaagatgaggaggaggcacaagaggaggatgaagaagaagaagaagacgaagaagaagaa
gaagaagaagaggaggaggaggaggaggaggaagagggggagcagcagcagcagcagcaa
caacaacaacaacaggtggatgtaagacatgaagagggagaggaggaggaggaggacgaa
gaggaagaggaggaggagcctgaggaagaggaggagcccnncgaggaggaggaggaggag
gaggaggaggaggaggaggacgatgataacaactctgatgaggtgcagaggggggcagca
gcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagttagcagtccg
agaggccaccaggtcaagtctcggcgggtcaacacacgcaaccagggccgcaggacagtt
ctgtacagggacgaatcggaggacgatggccatgggtcgaaggaagaccccctcaacctg
ggcaggtcccgttcaggacgggtacgccgcatgactgagaaagcccgtgtcagccacctc
atgggctggggtcactga

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