Embiotoca jacksoni (black perch): 138196610
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Entry
138196610 CDS
T10523
Symbol
pcdh1a
Name
(RefSeq) protocadherin-1
KO
K16498
protocadherin delta 1
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
138196610 (pcdh1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
eja01009
]
138196610 (pcdh1a)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
eja04515
]
138196610 (pcdh1a)
Protein phosphatases and associated proteins [BR:
eja01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
138196610 (pcdh1a)
Cell adhesion molecules [BR:
eja04515
]
Cadherins
Protocadherins
138196610 (pcdh1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Ig_CLSTN
Cadherin_FAT4_N
Cadherin_2
Cadherin_CELSR2_9th
Ig_Cad99C_N
Motif
Other DBs
NCBI-GeneID:
138196610
NCBI-ProteinID:
XP_069002941
LinkDB
All DBs
Position
Unknown
AA seq
1190 aa
AA seq
DB search
MELNLRVILFWVVVVHCGSAEGSILYRVQEEQPPNTLIGSLAADQGLPDSGHLYKLEVGA
PYLRVDGKTGDIFTTEIPIDRETLRDCRSLVKGKPCYLEFEVSVTDLIQNPSPRLIEGRI
EVQDINDNTPQFPSSVLTISVPENTIMGALFSIPLATDRDSDRNGVADYALTAGPDAATL
FGLQVADDRGGRLPQLIVLGNLDRELKDSYDLTIKAVDGGNPQRYSSALLRVVVTDANDN
SPKFEKSTYEAEVSENSPVGHSVLQVKANDSDMGPNGEIEYTLHQAVDPVPKLLRIDRST
GVIYVKGPLDREEISSLSFYVVARDKGPQPKSSKTFVTIDVTDQNDNAPAVEIRGIGLVT
HSEGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPASDSSSDNKRKY
FLQTTTPLDYERVRDYRVEIVAVDSGNPALSSTNSLKVQVTDVNDNSPIFSPTLFEVDFA
EENQPGERVLDVTASDADSGTNAELLYNIVADSTIKGLFEIDPNTGEVRARSPLDREHKE
RYEFRVTAADKGSPVHKGTATVVIKVLDRNDNDPKFMLSGYSFSVLENMPPLSPVGMVTV
LDMDKGENAHVHLSVEPDGGKFVVQNGTGTILSSISFDREKESSYTFRLKAVDGGEPPRS
SYVGVTINVLDENDNDPVITKPSNSSFRRLSPLASPDSHVEIVEAEDLDSGPNAELVFSI
AGGNPYQLFRISPSSGEITLAKEMTRKHGGLHRLVVRVSDRGKPARHATALVHIYVNETI
SNVSLVEALVGHSLYTPLDRDIAGDPDNGFAAQRSNILFGSLAGVAGVVMLILVVVFIRH
RIQRETKSGYQAGKKETKDLYAPKQAPKNAKGKRGRKGKPQKSPKPLGEEEEVSLQKSLK
FNLDGVNDSPRIHLPLTYSPGSPDIGRHYRSNSPLPSIQLQAQSPSASQKHQAVQDLPAA
NTFVGTGGDDNSTGSDQYSDYSYKTSQSKYNNKQHPHRRVTFSTANPVQDLQDASQHSYY
DSGLEESETPSSKSSSGPRIGPLTLPEDHYERTTPDGSIGETEHPENDIRSLPDVAMTGN
CTTECSELGHSDACWMPGHPSPVRKTRNPPKLSTFVPYQERGSLGRLANGSARLVGEEHR
SRLPPSRSAYSNSGHDANQDCPLEEMPLSVTSEFPPTSPSAHTPKREIYL
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atggaactgaatttacgagtaatactgttttgggtcgtggtggtgcactgtggctctgct
gaaggcagtatcctgtaccgggtccaggaggagcagcctcccaacactcttattggtagc
ctggcagcagaccagggactgccagactcgggtcacctctacaagctagaggtgggtgcc
ccttaccttcgtgtcgatggaaagacaggagacattttcaccacagagattcccatagac
agagagactctgagggactgtcggtccctggtaaagggtaagccctgctacctggaattt
gaagtgtccgtgacagatctgatccaaaacccgagcccacgacttattgaaggacgcatt
gaagtacaggatatcaatgacaacacaccacaatttccctcttctgtgctcaccatctct
gtccctgagaacacaatcatgggggctctattctccatacctctcgctacagacagggac
tcagacaggaatggggtggctgactatgcgctgacggcagggccagatgcagcaacccta
ttcggtttacaagtggctgatgacagaggagggaggctaccacagcttattgtcctgggc
aacctagatcgagagttaaaggattcatatgacctcaccatcaaggcagtggatggagga
aaccctcagcgctacagcagcgctctgctcagagtggtggtgaccgatgctaatgacaac
tcccccaagtttgaaaagtcgacctatgaagcagaagtttccgaaaacagtccagtgggg
cactctgtgctgcaggtcaaagcaaatgactctgacatgggacctaatggagaaattgag
tacacccttcatcaagctgtagacccagtcccgaagctcttgcgaattgatcgttctact
ggcgtcatctatgtcaaaggaccactggacagggaggaaatcagcagcttgtccttctat
gtggtggcgagggataagggtcctcaacctaaaagttctaagacatttgtaaccattgac
gtgactgaccaaaacgacaatgctccagctgtggagatccgtgggattgggcttgtgact
cacagtgaaggagtggctaacatttcagaggacatgccagtgggaacagctgttgctttg
gtgcaagtttccgacaaagatgaaggagagaacgcagtggtcacttgtgtggtagcggga
gatgttccattccagcttcgccctgccagcgactcgtccagcgacaacaagaggaaatat
ttcctccagaccaccactcctcttgactacgaaagagtcagggattaccgagtagagatt
gtggctgtagattctggaaacccagcactctctagtacaaactccttaaaggtgcaggtg
actgatgtgaacgataactctccgatattctccccaacgttgtttgaggttgattttgcc
gaagaaaaccaaccaggggagagggttttggatgttacagcctcggatgctgatagtggc
actaatgccgaactcctctataatatcgtggcggactcgaccatcaaaggtttgtttgag
atcgacccaaatacaggcgaagtaagagcccgaagcccacttgatcgtgaacataaagaa
cgatatgaatttcgggtcactgcagcagataaagggtcacctgttcataaaggaacagca
actgttgtaattaaagtccttgaccgcaatgacaatgaccccaagtttatgcttagtggc
tacagcttttcagttctggaaaacatgcctcctctcagcccagttggtatggtgacagtc
ctagatatggacaaaggtgagaatgctcatgttcacctctctgtagagcctgatggaggg
aagtttgtggttcaaaacggaacaggcaccattctctcaagcatctcatttgacagggag
aaggaaagcagctacacattccgtctaaaagcagtggatggaggagagccacccaggtcc
tcatatgtgggcgttaccattaatgtactggatgaaaatgacaatgaccctgtgatcacc
aagccctccaactcctccttcaggcgcttgtcacctctagcttccccagacagccacgtt
gagatcgtggaagctgaagacctggacagtgggcctaacgcagagctggttttcagtatt
gccggtgggaatccttaccagttattccgcatctccccctccagtggagagatcacactg
gcaaaggaaatgacccgcaaacacggaggactacatcgtctggtggtacgagtgagtgac
agggggaagcctgcacgccatgccactgccctagtccacatctatgtcaatgaaaccatt
tcaaatgtcagcctcgtggaagccttggttggacacagtctttacactccactggacagg
gacattgctggtgatcctgacaatggttttgctgcacagcgtagtaacattttgtttgga
agccttgctggagtggcaggcgttgtaatgttgatcttggtggtggtatttattcgacac
cgcatccaaagagaaactaagagtgggtatcaggcaggcaaaaaggaaacgaaagactta
tatgcacccaagcaggcaccaaagaatgccaaaggcaaacgagggaggaaaggaaaaccc
cagaagtccccaaagccacttggggaagaggaagaggtcagccttcaaaaaagtctcaag
ttcaaccttgatggagtcaacgatagccccaggatacatctgccactaacatattcgcct
ggaagcccagatataggcaggcactaccgctccaactcccccttaccctccatccagctg
caagcccaatccccctccgcctcccagaagcaccaggccgtacaggaccttcctgccgcc
aacacctttgtaggaacaggaggagacgacaactctaccggctcagaccagtactcagac
tacagctacaagactagccaatccaagtataacaacaaacagcatccccatcggcgagtg
accttttctactgccaacccagtgcaggacctgcaggatgcctctcagcacagctactat
gacagcggcttggaggagtcagagactcccagcagtaagtcatcgtctggtcctcgcatc
ggacctctgaccctgcctgaagaccactatgagagaaccactccagatggcagcattgga
gagaccgaacacccggaaaacgatatccgctccctccctgacgtggcgatgaccgggaac
tgcacgaccgagtgcagcgagttgggccactcagacgcctgctggatgcccgggcatccc
tcccccgtacgcaagaccaggaaccccccgaaactctccacctttgtgccttaccaggag
agagggagcctgggacgcctggcgaacgggagcgccaggctcgttggagaggagcaccgc
tcgcgcctcccgccctcccgcagtgcctattccaacagcggtcatgacgccaatcaggac
tgccccttggaggagatgcccctgagcgtcacctccgagttcccacccacctccccctct
gcccacaccccaaaacgagaaatttacctgtga
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