Embiotoca jacksoni (black perch): 138197120
Help
Entry
138197120 CDS
T10523
Name
(RefSeq) clathrin heavy chain 1-like isoform X1
KO
K04646
clathrin heavy chain
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja04142
Lysosome
eja04144
Endocytosis
eja05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
138197120
04142 Lysosome
138197120
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
138197120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
eja04131
]
138197120
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
eja04147
]
138197120
Membrane trafficking [BR:
eja04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
138197120
Exosome [BR:
eja04147
]
Exosomal proteins
Proteins found in most exosomes
138197120
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_PEP5_VPS11
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
138197120
NCBI-ProteinID:
XP_069003761
LinkDB
All DBs
Position
Unknown
AA seq
1684 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMADPNN
PIRRPISADSAIMNPASKVIALKAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGDSQPIKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAGFAQFKMEGNTEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISSKQDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEPTAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNTLFAAGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRNVMRISPEQGLQFSQMLVQDE
EPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPMEGPLQTRLLEMNLVHAPQVADAIL
GNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLTELFESFKSFEGLFYFLGSIVN
FSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNSLQKYIEIYVQKVNPSRLPVVIGGLLDVDCAEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPFY
DSRVVGKYCEKRDPHLACVAYERGQCDQELINVCNENSLFKSLSRYLVRRKNPELWASVL
LETNNYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPPVWSQLAKAQLQKGLVKEAIDSYIKADDPSAYMEV
GQAAAQSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDDKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWGELVFLYDKYEEYDNAIITMMN
HPADAWKEGQFKDIVTKVANVELYYKAVHFYLEFKPLLLNDLLIVLSPRLDHTRAVNFFS
KVKQLPLVKPYLRSVQNHNNKSVNEALNNLFIIEEDYAAVRTSIDAYDNFDNISLAQGLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDTELAEELLAWFLNE
DKKECFAACLFTCYDLLRPDVVLETAWRHNIMDFSMPYFIQVMREYLSKVDAIKEKVDKL
EASESLRKQEEQATESQPIVYGTPQLMLTAGPNVAVPPQQAYGYSYTAAPGYAPPPQPSF
GYGM
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatactacctatccgcttccaggagcacctgcagctccagaacctggggatc
aacccggccaacatcgggttcagcaccctgaccatggagtcggacaagttcatctgtatc
agggagaaagtgggcgagcaggcccaggtggtcatcatcgacatggctgaccccaacaac
cccatccgccgccccatctcggccgacagcgccatcatgaaccccgccagcaaagttatt
gccctcaaagcggcaaagaccctgcagatctttaacattgagatgaagagcaagatgaag
gctcacacgatgacagatgatgtgaccttctggaagtggatctccctcaacacggttgcc
ctggtcacagacaacgcagtctaccattggagcatggagggtgactctcaaccaatcaaa
gtctttgaccgtcactccagcctggcaggctgtcagatcatcaactaccgcactgatgcc
aaacagaagtggctgctgctcatcggcatctcggcacagcaaaaccgtgttgtcggagcc
atgcagttgtactcggtggacaggaaggtgtctcagcctattgaggggcatgccgctggc
tttgcacagttcaagatggagggcaacactgaagagtcaactctgttctgcttcgctgtg
cgaggacaagcaggaggaaaactgcatatcattgaagtggggactccaccaactggaaac
cagccatttccaaagaaagctgtggatgttttctttcctccagaagcccagaatgacttc
cctgttgccatgcagatcagttccaagcaagatgtagtatttctcatcaccaaatacggc
tacatccacctgtacgacctggagaccggaacttgtatctacatgaacaggatcagcggg
gagaccatttttgtgacggccccacatgaacctactgctggtattattggagtcaacagg
aaaggacaggtgttgtctgtgtgcgtggaggaggaaaacatcatcccctacatcaccaat
gtgctccagaacccagacctggctctccgcatggctgtacgcaacaacctcgcaggtgct
gaggagctgtttgctcgcaagttcaacaccctcttcgcagcaggaaattactcggaagct
gccaaggtggcggccaacgcgcccaagggcatcctgcggaccccagacaccattcggagg
ttccaaagtgttccagcccagccaggccagacatctcctttgctccagtactttggcatc
ttgctggaccaaggccagcttaataagtttgaatctctggagctgtgcaggcctgtcctt
cagcagggccgcaagcagctgcttgagaaatggctaaaagaggacaagctggaatgttct
gaggagctcggagacttggtgaagtccgtggacccgactcttgccctcagtgtctacctc
agagccaacgtccccaataaggtcattcagtgttttgcagagaccggccagttccagaag
attgtcctttatgccaagaaggtgggctacactccagactggatctttctgctaaggaac
gtaatgcggatcagtccagaacagggccttcagttctcccagatgctggttcaggatgaa
gagccacttgctgacattacacagattgttgatgtgttcatggagtacaacctgatccag
cagtgcacatccttcctactagatgccctgaagaacaacagacccatggaaggaccgctg
cagacacgcctgctggaaatgaatttggttcatgcaccacaggttgcagatgccatcctg
ggcaatcagatgttcacccactatgatcgcgctcatgtggcgcagctgtgtgagaaggcc
ggtctcctgcagagggcgctggagcattatactgacctgtatgacattaaacgggctgtg
gtgcacacacatctcctcaacccagagtggttggtgaatttcttcggctccctctctgtg
gaggactctctggagtgtctgagggccatgttgtctgccaacatccgtcagaacctgcag
atctgtgtgcaggtcgcttccaagtaccatgaacagctcagtactcagtccctcaccgaa
ctgtttgagtcattcaagagcttcgagggtttgttctacttcttgggttccattgtgaac
ttcagccaggatccagaggtccacttcaaatacatccaggccgcctgcaaaacaggccaa
attaaagaggtggagagaatctgcagagaaagtaattgctacgaccccgaacgtgtgaag
aacttcctcaaggaagccaagctcactgaccagctgcctttaatcattgtgtgtgaccgc
tttgattttgtccacgatctggtcctctacctgtaccgcaacagtctgcagaaatacatt
gagatctacgtgcagaaggtgaaccccagccgtctgcccgtagtcattggaggattattg
gatgtggactgtgctgaggatgtgattaagaacctgatcttggtggtgagaggacagttc
tccacagatgaactggttgctgaagtggagaaaagaaatcgactgaagctgctgctgcct
tggttggaggctcgtattcatgagggatgtgaggaaccggcaacccacaacgctctggcc
aagatctacatcgacagcaacaacaaccccgagcgcttcttgagggagaacccgttctat
gacagccgtgtggtgggcaagtactgcgaaaagagagacccccatctggcctgtgtggcg
tatgaaagaggacaatgtgaccaggaactcatcaatgtgtgcaatgagaactccctgttc
aagagtctgtcccgttaccttgtacgtcgcaagaaccctgagctgtgggcgagtgtgctg
ctggagaccaacaactacaggcgacctctcattgaccaggttgtccagacagccttatca
gagacccaggatccagaggaggtgtctgttacagtcaaggcctttatgaccgccgacctt
cccaatgagctcattgagcttctggaaaaaattgtgctggataattctgtcttcagcgag
cacagaaacctccagaatctgctcattctgacagccattaaagctgatcggacacgtgtg
atggagtacattaaccgcctggacaactacgatgctccggacattgccaacatcgccatc
agcaatgagctgtttgaggaggcttttgctatttttagaaaatttgatgtcaacacctct
gctgtgcaggttctgattgaacacattggtaacctggacagagcttatgaatttgctgag
cgctgcaatgagcccccagtttggagtcagctggcaaaggcccagcttcagaaaggtctg
gtcaaagaagccattgactcttacatcaaagctgatgacccctctgcttacatggaggtg
ggacaagctgcagctcaaagcggaaattgggaggacctggtgaagttcctgcagatggcc
cgtaagaaggcccgcgagtcatacgttgaaacggagttgatctttgccctggccaagacc
aaccgcctggctgagctcgaggagttcatcaacggacccaacaatgctcacattcagcag
gtgggcgatcgttgctacgacgacaagatgtacgatgcagccaaactgctttacaacaac
gtgtccaactttggccgcttggcctccactctggtgcacctgggagaatatcaggctgct
gtggatggagcccgcaaggccaacagcacccgcacctggaaggaggtgtgttttgcttgt
gtcgatggaaaggagttccgtctggcccaaatgtgtggcctgcatattgtggtccacgct
gatgaactggaggaactcatcaactactaccaggaccgtggttacttcgaggagctgatc
actatgctggaggccgccctggggctggagcgcgctcacatgggtatgttcactgagctg
gccatcctctactccaaattcaaaccccagaagatgagggaacacctggagctcttctgg
tcccgcgtcaacattccaaaggttctgagggcagccgaacaggcccacctctggggcgag
ctcgtgttcctttatgacaagtacgaggaatacgacaacgccatcatcaccatgatgaac
caccctgctgacgcctggaaggagggccagttcaaagacattgttaccaaggtggccaat
gtggagctgtactacaaggccgtccacttttatctggagttcaaaccgttgttactgaac
gacctgctcattgtcctctctccaagactggaccacacacgtgctgtcaacttcttcagc
aaggtgaagcagctgcctctggttaaaccttatctgaggtctgtccagaatcacaacaac
aagtcagtgaacgaggcactgaacaacctcttcatcatcgaggaagactatgcggcggtg
cgtacatccatcgacgcttacgacaactttgacaacatctcactggcccagggcctggag
aagcatgagctgattgaatttaggaggattgccgcctaccttttcaagggcaacaaccgc
tggaaacagagtgtggagctctgcaagaaggacaagctctacaaggatgccatgcaatat
gcgtcagagtccaaagacacggagctggcggaggagctcctggcttggttcctgaacgaa
gacaagaaggagtgttttgccgcctgccttttcacctgctacgacctgctgcggcccgac
gtggtgctggagaccgcctggcgacacaacatcatggacttctccatgccgtacttcatc
caggtcatgagggagtatctctctaaggttgatgcgataaaggaaaaggtggacaaactc
gaggcctccgagtccctgaggaaacaggaggagcaggccacagagtcccaacccatcgtt
tacggcaccccccagctcatgctcacagcggggcccaacgtggccgtgcccccccagcag
gcctacggctacagctacacagcagcgcccggctacgccccgccgccgcagcccagcttc
ggttacggcatgtga
DBGET
integrated database retrieval system
