Embiotoca jacksoni (black perch): 138197146
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Entry
138197146 CDS
T10523
Symbol
tsku
Name
(RefSeq) tsukushi
KO
K08130
tsukushi
Organism
eja Embiotoca jacksoni (black perch)
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
eja00535
]
138197146 (tsku)
Proteoglycans [BR:
eja00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
138197146 (tsku)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_6
LRR_14
LRR_EndoS
LRR_NXF1-5
LRR_LRWD1
LRRNT
LRR_9
LRR_MHP1-HER1-GIP3
LRR_RPS2
LRR_SKP2
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
138197146
NCBI-ProteinID:
XP_069003818
LinkDB
All DBs
Position
Unknown
AA seq
348 aa
AA seq
DB search
MALVLWLGLSLLAAVRSSAVQNCHPGCHCEVESFGLFDSFSLTRVDCRGLGPSISMPIPI
PLDTSHLDLSSNTMGLLSDTMLAGPGYTTLVSLDLSSNGIAKVNPNALSKLRYLETLDLS
HNDLESLSSSCFSGLPLAEVDLSHNSFHEFDMDVFTTKVNGEPVSVDLSHNKLVSVSTTL
HGRVLHIQSLNLSANQLASVPSLAGLPLRYLNLDGNPITQIKEGAFAQLKDLVYLSISGL
HELQQIEPYTFKGLQSLQVLDLSNNPKLKSLSFAVFSGLDSLQELNLSGSGVASLPANML
THLPSIRSITLGRGIHCWRTQKQGQFHPQMGQMQHNEVLNCNVEGIVS
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggcactcgtcctgtggctcggcctgtcgctgctggcggctgtccggtccagcgcagtc
cagaactgccaccctggttgccactgtgaggtggaaagctttgggctgttcgacagcttc
agcctgaccagagtggactgccgagggctgggacccagcatctccatgcccatccccatc
ccgctggacacttcccacctggacctgtcctccaacaccatgggcctgctcagtgacacc
atgttagctggtccaggctacaccaccctcgttagcttggacctcagtagcaacggtatt
gcaaaggtgaatcccaatgcattgtccaagcttcgttacctggagactctcgatctgagc
cacaacgacctggagagcctctcgtcaagctgtttctctgggctcccgctggctgaggtg
gacctcagccacaacagcttccatgagttcgacatggacgtgtttactactaaagtgaac
ggggaacctgtcagcgtggatctgtctcataacaagcttgtgtcagtgtccaccactttg
catggacgagttttacatatccagagcttaaatctttcagcaaaccagctggcgagtgta
ccgagcctggccggacttccactgaggtacctcaatctggatgggaaccccatcacacaa
atcaaggagggagccttcgctcagctgaaagatctggtttatttatccatcagtggcctc
catgagcttcagcagatcgagccgtacaccttcaagggcctccagagcctgcaagtcctg
gatctttcaaacaaccctaagctcaagagcctcagcttcgcagtgttcagtggactagac
tccctgcaagagctgaatctgtctggttctggtgtggcatccttgccagccaacatgctg
acccacctgcccagcattaggagtatcacactgggacgaggcatccactgctggaggacc
cagaaacagggacagttccacccgcagatggggcagatgcaacataatgaggtgctcaac
tgtaacgtggagggcattgtgtcgtga
DBGET
integrated database retrieval system
