Embiotoca jacksoni (black perch): 138197420
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Entry
138197420 CDS
T10523
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138197420 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eja03019
]
138197420 (dhx36)
03012 Translation factors [BR:
eja03012
]
138197420 (dhx36)
Enzymes [BR:
eja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
138197420 (dhx36)
Messenger RNA biogenesis [BR:
eja03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
138197420 (dhx36)
Translation factors [BR:
eja03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
138197420 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
HA2_C
DEAD
OB_NTP_bind
HA2_N
AAA_22
nSTAND3
ATPase
AAA_19
HerA_C
NB-ARC
PhoH
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
138197420
NCBI-ProteinID:
XP_069004355
LinkDB
All DBs
Position
Unknown
AA seq
1137 aa
AA seq
DB search
MSSGYGGGGGRRGRRGGGRGHRDGSRERWDRGGGGGSRGRGSDYDCDQDRGGGGGGGGGG
GSPKDRPPPHLKGREIGLWYARYGAVRRKQADRRSRAVVQMDEAREQHITKLLNSVQNEH
PGPGRDSRGPGASSSGNWQTAASTRGHCYFDGDEPEEDKQKIDVKSEEEEDEIGPGHKSQ
RCFSTTAAKDEPPDTWEEDEPEEKEKLIRKDKDLEFLFQEVVRDGPLDDTLKRDLQNKIS
DPKYKEMLKFREKLPSYKKKEELVELINSNRVLVVSGETGCGKTTQVTQFILDDYINRGV
GSMCRVVCTQPRRISAISVAERVAAERAESVGNGNSCGYQIRLQSRLPRKQGSVLYCTTG
IILQWLRSDPFLSSISHLVLDEIHERNLQSDVLLVIVKDLLNLRDDLKVILMSATLNAEK
FSKYFDNCPMIHIPGLTFPVEEFLLEDIVEMTRYGPQNKDRRPSWKKSFWQGRNSRPEKE
EKEAEYKESWPCYARTLQDRYSDRTVEALEMLDSDDKIDLELILALIRHIVLNDEEGAIL
VFLPGWDNISSLNDLLMAQQMFRSDRFVIIPLHSLMPTVNQTQVFKRPPPGVRKIVIATN
IAETSITIDDVVYVIDGGKIKETNFDTNNNISTMTAEWVSLANAKQRKGRAGRVRPGKCY
HLYNGLRASLLDAYQLPEIMRTPLEELCLQIKILNLGSIGRFLEKALDPPTEKAVSLAIK
NLTDLNALDCAENLTALGFHLARLPVEPHIGKLILFGALLGCLDPVLTIAASLSFKDPFF
IPLGKEKMADMRRKTLSRNSKSDHLTIVNAFQGWEEAKRRGARYEREYCWDNFLSANTLQ
MLHNMKGQFAEHLMRTGFVSSKDPKDPKSNVNSDNEKLIKAVIVAGLYPKVATIRPSHSK
KRPGVPKVYTQADGKVCIHPKSVNAEETEFNFTWLIYHLKMRTSSVSKREAPVPRFNAAA
RPVARFSCARPAVEGCRRCRGGFALAEYLIKMLSFQLPLKGSRASKPPDETVNCSFLTGA
LSPLSSSFVPPPFPLHTPISPSFPSTCLCSCSAVSICACFHSAEKTPFMSSLIAACAFAA
FVRRGHGTFFSIAVIAANLFFFFFFFLVLQHASGFVPNAVQFLYIKEKKNCQGHLFS
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgagttctgggtatggcggtggcggtggaaggagaggcaggcgaggtggtggtcgcggc
cacagagacggcagcagggagagatgggacagaggaggtggaggaggctcgagaggacgc
ggttccgactacgactgcgaccaggaccgaggaggaggaggaggaggagggggaggagga
ggatcaccgaaagaccgtcctcctccacatctgaagggccgggagattgggctgtggtac
gcaagatacggagccgtgaggaggaaacaagctgaccggagatcgagggcggtggtgcag
atggatgaggccagagagcagcacatcaccaagctgctcaactccgtccagaacgagcat
cccggcccagggagggacagcaggggtccaggagcctcttcatccggcaactggcagacg
gctgccagcactcgtggtcactgttactttgatggggacgagcctgaggaggataaacag
aagatcgatgtcaaatcggaggaagaggaagatgaaattggtccaggccacaaatcacaa
cgttgcttctctacaacagcagctaaagacgagcccccggacacctgggaggaagacgag
ccggaggagaaagagaaactgatcaggaaagacaaggatctggagttcctgtttcaggaa
gtagtcagagacggaccactggatgacaccttgaagagagatctgcagaacaaaatatct
gatccaaagtacaaagaaatgctgaaattcagggaaaaactaccatcctataagaaaaaa
gaggagctggtggagctgatcaactcaaaccgtgtcctggtggtgagcggggagaccggg
tgtggaaagaccactcaggtcactcagttcatcctcgatgactacatcaacagaggcgtg
ggctcgatgtgccgcgtggtctgcacgcagcctcgtcgcatcagcgcaatctcggtagca
gagcgtgtagcggcagaaagggcagaaagtgtggggaatggaaattcttgtggttatcaa
atccgccttcagagccggttaccacggaaacaagggtcggtcctgtactgtaccacaggc
attattcttcagtggcttcgctcagacccgtttttgtccagtatcagtcatctggtgttg
gacgagatccacgagaggaacctgcaatcagacgttttgctcgtcattgtgaaggactta
ctcaacctccgggacgacctcaaggtcatcctcatgagtgccacgctcaacgcggagaag
ttttcaaagtattttgacaactgtccaatgatccacatccctggtttgacgttcccagtg
gaggagttcctacttgaggacattgtagaaatgaccaggtatggcccccagaataaggac
cgtcgcccctcatggaagaaaagcttttggcaggggcgcaactccagacctgagaaggag
gagaaagaggctgaatacaaggagagctggccttgttatgcacgcacactgcaagaccga
tactctgacaggaccgttgaggcactggagatgttagacagcgatgacaagattgatctg
gagctgattctggcgctgatccgtcacattgttcttaatgatgaggaaggagcaatcttg
gtcttcctgcccggttgggacaacatcagcagtctcaatgacctgctcatggctcagcag
atgttccgatcagaccggtttgttatcatccctctgcactccctcatgcccaccgttaat
cagacgcaggtgttcaaaagacctcctcctggagttagaaagattgtgattgctaccaat
attgcagagaccagcatcaccatcgatgacgtggtttatgtgatagatggaggcaagatt
aaggagaccaactttgacaccaacaacaacatcagcacaatgacggccgagtgggtcagc
ttagccaatgccaaacagaggaaaggacgtgctggcagagtgcgtccagggaagtgctat
catctgtacaacggtctcagagccagcctgctggatgcctatcaattacctgaaattatg
aggacgccgctggaggagctctgcctgcagattaagatattgaatctggggtccatcggt
cggttcctggagaaagccctggaccctcccactgaaaaggccgtcagcctcgccatcaag
aacctcacagacctgaacgccctggactgcgctgagaacctgacagcgttgggtttccac
ctggctcgtctgcccgtggagcctcacatcggtaaactcatcctgttcggagcgctgctg
ggctgcctggaccccgtactcaccatcgcggcttcactcagcttcaaagaccctttcttc
atacccctgggtaaagagaagatggcagacatgaggagaaagaccctgtccagaaactcc
aagagtgaccacctcactattgtaaatgccttccagggctgggaggaggcaaaacggcgt
ggtgccagatatgaaagggagtactgctgggacaacttcctgtctgccaatacactgcag
atgctgcacaacatgaagggtcagtttgctgaacatctcatgcgtacaggttttgtcagc
agcaaggaccccaaagaccccaaatctaacgtcaactcagacaatgagaagttaatcaag
gcggtgattgtagccggtctgtacccgaaggttgccacgatcagaccatctcacagcaaa
aagagaccaggtgttcccaaggtgtacacccaggctgatggaaaggtgtgcatccacccg
aaatctgtcaacgctgaagagacggagttcaacttcacgtggctcatttaccatctgaag
atgagaacgagcagcgtgagtaagcgcgaggccccggtgccacgtttcaacgccgccgcg
cgacccgtcgcgcgtttctcctgcgctcgaccggcggtcgaaggttgtcggcggtgccgc
ggcggctttgcacttgctgaatatttgattaaaatgctttcctttcaactccctctcaaa
ggctcacgcgcttcaaagcctccggacgaaacggtcaattgcagtttcctgactggcgcc
ctctctcctctttctagctcttttgtccccccccccttccctctccacactcccatttcc
ccttcctttccatctacctgtctttgttcttgctctgctgtctctatttgcgcgtgtttc
cattctgcagaaaaaacacctttcatgtcgtccctgattgctgcctgcgccttcgccgct
tttgtccgtaggggacatgggacattcttttcgattgccgttattgccgctaaccttttt
ttttttttttttttttttttagttttgcagcatgcgagcggttttgtgccaaacgctgtg
caatttctatatataaaagaaaaaaaaaattgtcaaggtcatttgttttcttga
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integrated database retrieval system
