Embiotoca jacksoni (black perch): 138197446
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Entry
138197446 CDS
T10523
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
eja Embiotoca jacksoni (black perch)
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eja03021
]
138197446
Transcription machinery [BR:
eja03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
138197446
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
138197446
NCBI-ProteinID:
XP_069004387
LinkDB
All DBs
Position
Unknown
AA seq
2124 aa
AA seq
DB search
MSASFVPNGASLEDCHSNLFCLADLTGIKWRRFVWQGPTSSPILFPVTEEDPILCSFSRC
LAADVLSVWRRHPTPGRRELWLFWWGDDPSFAELIHNELSSEEDGEWESGLSYECRTLLF
KAIHNLLERCLMNRGFVRIGKWFVKPYQKEEKTINKSEHLSCAFTFFVHGDSNVCTSVEI
AQHQPLQRLSEEHLSLAQQSSSPLQVILSPYGLNGTLTGQAFKMSDHPTQKLIEEWRQFY
PISPNPKEVQEDKMEDTDWEDDSLAAVEVLVAGVRMVYPSCLVLLPLSDLPAVVPQGSAN
TSGSLCGAQQGQAAHRDPAMSSVTLTPPTSPEEAQTDYQPAQRWLKLSSASDGYSSNNTL
HGGKIPRRLASQMVESVWQEYNINRTGNKRKFTTLTNGTCEEESDKTGLWDFMEPTHRPH
CNCSRHKNQKQRSSSTSGHPPSSCQPAQPAPKHKLGEKLEKGEKQQKRPQMPFHHRNSVS
EDQSLEPQTQRLCLRSQDEGSYPSLHHVDTVPSKAPTLHAHGPPADLVGSPPPPPLSPHP
CDHVESDMTPGGMKSSSTPIHQPFYPPSVEPCLMPQKGSSEEPQLENMAMPLPFPPTYNE
TLEPNVFVGSAVSPSEHSTHNPWKYFNLPRKKASNFLTPQLPVDKIRDDSGGGGGTENVV
SVTELMSGSSQPLKVSQELVRTYAQRRNSHLTSTTGDGEHGEEPDPYAFVEGDEEFSFTE
KKDKPGAEKDGNKKHKGDDGSGASADDGQGPSGSKPSASTSLIHENDLAVSYSDLDKIFN
SDEDELAPGSKRAGAGAEDKFGCKDNKPATLDPLSCISSADLHQMFPTPPSLEQQGYSPM
NSGSKDSLETGAGLTLLDGSQLNSHFKMEVEEGFCSPKPSEIKDFSFVYKPEACQSVLGC
SMYAPLKMLPSQCLLPIKLPEDCVYTPSWTLGKMELIPPVSSVNLLTKDSNVPSVEPDYS
QSYTPQTHTPFMSSSAPPSNSGTGILPSPATPRFSVPTPRTPRTPRTPRGPSSVQGSLKY
DNSDLYSPASTPSTCRPLSSVEPATVPSIPEAHSLYVTLILSESVMNLFKDCNFDSCCVC
VCNMNIRGADVGVYLKDNGEAQYPCTCGFSAVANRRFGQSAGLFLEDELDVVVRGSDASR
DTERCFEELRASTTHKAGSLKEKPPDELILLLQDQCTNPFAPMAGVEYAKPSSAPCSFLR
IEERDCYNDCYMALEHGRQFMDNMSGGKVDETLVKSTCLHQWPKCKSADMSKLFSQDVLR
VLLSLQPVLQDTIQKKRSVRSWGIQGPLTWQQFHKMAGRGSYGTDESPEPLPIPTFLVGY
EYDFVVLSPFGLPYWEKLLLDPFGSQRDVGYVVICPENEALLRGTRTFFKDLSAMYEACQ
LGQHRPICKSHPEGVLKVGTTEGRSTTEQPLSDWFLKMAAREGNNEAFNKLKLFAQVCRY
DLAPYLSEQSLDSSLLSQRSPTPPASPQTSSTSSTSSGLQGTNTTSSSTSSAQPPQVNST
PPSSSSSSSGPQSIGGLASGKPSSYSPFGTTGLQGSTSQNGPQSNPQGAGGLAENGPSAN
QPQVPTEAPESTMERDKVGKPTDGESHAISYPPAIVVYIVDPFSYEDADREVHSSTYTLG
LLRCYIEMLHLLPARIRNAVSVQIVPCQYLLQPVHSGERHVYSQHLKSLAFSVFTQCRRP
LPNSTNFKALTGFGPGLAIDMALKNPERPECLRLYTPPFILAPVKDKQTELGETFGEASQ
KYNVLFVGYCLSHDQRWLLASCTDQHGELLETCIISVDVPNRARRKKGSARRVGLQKLWE
WCLGLVQVTSLPWRVVIGRLGRMGHGELRDWSILLSRRNLQSLSKRLKETCRMCGISAAD
TPSILSACLVAMEPQGSFVIMPDSVSTGSVFGRSTTLNMQTSQLSTPQDTSCTHILVFPT
SAMVQVNINTSEPIDINFNPINPDGSDGMGLFDLFDNDMVDPDLINILPNSPTTSPVHSP
GSHYHQGGDGSKGQSADRMESHEEALNILQQPMALGYFVSTAKAGPLPDWFWSACPQAQN
QCPLFLKASLHLHVSSVQSDELLHSKHSHPLDSNHTSDVLRFVLEQYNALSWLTCDPATQ
DRRSCLPVHFVVLTQMYNFIKNML
NT seq
6375 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgagctttgtaccaaacggggccagcctggaggactgccactccaacctcttc
tgcctggctgatttgactggaataaaatggcgacgttttgtgtggcaaggacccacctct
tcgcccatccttttcccagtgaccgaggaggaccccatcttgtgtagtttcagccgctgc
ctggcggcagatgtgctgagtgtgtggagaaggcaccccaccccgggtcgaagggagctc
tggcttttctggtggggggatgaccccagtttcgcagaactcatccacaatgagctgtcg
agtgaggaggacggcgagtgggagagcggcctgtcctacgagtgtcggacgctcctgttc
aaagccattcacaacctgctggagcgctgtctcatgaaccgcggcttcgttcgcatcggc
aagtggtttgttaagccataccaaaaggaggagaagaccatcaacaaaagcgagcacctc
tcttgcgcgttcactttcttcgtgcacggcgacagcaacgtgtgcacaagtgtggagatc
gcacagcatcagcctcttcagcgactgagcgaggagcacctcagcctcgcgcagcagagc
tccagccccttgcaagtcatcctgagcccatatggcttgaatggcaccctcaccggacag
gcgtttaagatgtcagaccacccgactcagaagctcatagaagagtggcggcagttttat
cccatcagccccaatcccaaggaggtccaggaagataagatggaagatacagactgggag
gacgattccctggcagctgtggaggtccttgtcgcgggagtgaggatggtctacccttcc
tgcctggtgcttctccccctgtcggacctccctgctgtggtccctcagggctcagccaac
acctcaggaagcctgtgtggtgctcagcagggccaggctgctcacagagaccccgccatg
tcgtctgtcacgctgactcctccgacgtcaccagaggaggctcagactgattatcaacct
gcccagaggtggctcaagttgtcctctgcatccgatggctacagctcgaacaacactctt
catgggggtaaaatccctcgcaggctggccagccagatggtggagtctgtgtggcaggag
tacaacataaaccgtacagggaacaagaggaagtttactaccttgacaaatgggacctgt
gaggaggagtctgacaaaactggactctgggattttatggagccaactcacaggcctcat
tgcaattgctcaaggcataagaatcagaagcagcgatccagcagcacctcaggacacccg
ccttcatcgtgccagcctgcccagccggcccccaagcacaagctgggcgagaagctggag
aagggggagaagcagcagaagaggccgcagatgccttttcaccaccgcaactctgtgagc
gaggaccagtccctggagccgcaaacccagaggctttgcctacgatcgcaggatgagggc
tcgtatcccagcctgcaccatgtggacacggtgccatccaaagcgcccacgctgcacgcg
cacggccctcccgccgacctcgtcggctccccgcctccccctcctctcagcccgcatccg
tgcgatcacgtcgaaagcgacatgactccgggtggcatgaagagctcgtccacgcccatc
caccaacccttctacccgccgtcagtggagccctgtctgatgccacaaaagggctcgtcg
gaggagcctcagctggagaacatggctatgcctttgcccttccccccaacctacaatgaa
accttggagcccaacgtctttgtgggttcagccgtcagcccgagtgaacactccacccac
aacccctggaagtatttcaacctgcccaggaagaaggcctccaacttcctgacaccccag
ctacctgtggataaaatacgagatgattctgggggaggaggaggaacagaaaatgtagtc
tctgtcacagagttgatgtcgggctcctcgcagcctctgaaggtgtcccaagagctggtc
aggacttacgcccaacggagaaacagccatctgacctccaccacaggagacggagaacac
ggtgaggagccggacccttacgcctttgtagagggagacgaggagttcagctttactgag
aagaaggacaagcctggagctgagaaggatggcaacaagaaacacaagggggatgatgga
agtggagcttctgcagacgatggtcagggtccatcaggcagtaaaccttcagcctccacc
agcctcatccacgaaaacgacttggctgtgtcctacagtgacctggataaaatcttcaac
tcggatgaggatgaactcgctcctggatctaaaagagctggagctggtgcagaagacaag
tttggctgtaaagacaacaaaccagccacgttggatcccctgtcttgcataagctctgca
gacctgcaccagatgtttcccaccccgccctccctggagcagcagggttactctcccatg
aactcggggagcaaggacagcctggaaacgggggcgggcctcaccctgttagacggcagt
cagcttaacagccacttcaagatggaggtggaggagggtttctgcagccccaaaccatct
gaaataaaggatttctccttcgtgtacaagccggaggcgtgtcagtcggtcctcggctgc
tctatgtacgcccccctgaagatgctgcccagccagtgtctgctgcctatcaaactgcca
gaagactgtgtgtacacgccgagctggactctgggcaaaatggaactgatacctccggtg
tcgagcgtcaatctcctcaccaaagacagtaacgtccccagtgtggagccagactacagc
cagagctacacccctcagacccacacccccttcatgtccagcagtgctcctcccagcaac
agcggcactggcatcctgccttcgccagctacgccacgcttctccgtgcccacgcctcgc
acgccgcgcactccccggaccccccgcggcccatccagcgtccagggctccctcaagtac
gacaattctgatctttactctcctgcctccacgccctccacctgccggccgctcagctcc
gtagagccggccaccgtaccctccatccccgaggcacacagcctctacgtcaccctcata
ttgtctgagtcggtcatgaacctcttcaaggactgcaacttcgacagctgctgcgtgtgc
gtctgcaacatgaacatccgaggggcggatgtcggcgtgtacctcaaggacaacggcgag
gcccagtacccctgcacctgcggcttcagcgccgtcgccaatcggcgcttcggccagtcg
gccgggctctttctggaggatgaactggatgtggtggtacggggctcggacgccagtcga
gacacagagcgatgttttgaagagctgcgagcttccacgacacacaaggccggcagcctg
aaggagaaacctccagatgagctcatactgctgctgcaggaccagtgcaccaacccgttt
gccccgatggcaggtgtggagtacgccaagccgagctcggccccctgttccttcctgagg
atcgaagagagagactgttataatgactgctacatggctctggagcatggcaggcagttc
atggacaatatgtcaggaggcaaagtagatgaaacactagtgaaaagcacctgtcttcat
cagtggccaaaatgcaaatcagcagacatgagcaagctgttctctcaggacgtcctgcgg
gtgctgttgtccctccagcctgtgctgcaggacaccatccagaagaagaggagtgtgcgc
tcctggggcattcagggaccactcacttggcaacagttccacaaaatggctgggagggga
tcatacggtacagatgagtctcccgagcctctgcccatcccgacctttttggtcgggtac
gagtatgatttcgtggtactgtctccttttgggttgccctactgggagaagcttctcttg
gatccttttggttcccagagagatgtgggatatgtcgtcatctgcccagaaaatgaggct
ctgctgcgtgggactagaaccttcttcaaagatctgagcgctatgtatgaggcatgccag
ctggggcaacacaggcccatctgcaagagtcacccagagggtgtattgaaggtcggcacc
acagaaggcaggagcacgacagagcagcccctcagtgactggttcctaaagatggctgcc
agagagggaaacaatgaagcctttaacaagctcaaactctttgctcaagtgtgccgctat
gatctcgctccgtacctgtcagagcagtctttggatagctctctgttatcccagcgcagc
cctaccccgcccgcctccccccagacctccagcacttccagcacctcctcaggactccag
ggcaccaacactaccagctccagcaccagctctgcccagcccccccaggtcaacagcacc
cctccctcctcctcctcctcctcctcaggcccccagagtatcgggggattggcctcaggc
aagccaagctcctactcgccatttggaacgacaggcttgcaaggcagcacgtctcagaac
gggccccagtcaaacccacagggtgcgggggggctggcagagaacggaccctctgccaac
cagcctcaagtgcccactgaggcaccagagagcacaatggagagagacaaagtgggtaag
ccaacggacggagagtcccacgctatttcttacccgcccgccatagtggtgtacatcgtg
gacccgttcagctacgaagatgcagacagagaggtccactccagcacctacacattgggc
ctgctgcgctgctacatcgagatgctccacctgctgcctgctcgcatcagaaacgccgtc
tcagtacagattgttccctgccagtatctgctgcagccggtgcacagcggggagcgccac
gtctacagccagcacctcaagtcgctggctttctccgtgttcacgcagtgtcgtcggccg
ctgcccaactccaccaacttcaaggctctgacgggcttcggccccggtctggccatcgac
atggctctcaagaacccggagaggcccgagtgtctgcgtctttatacgccgcctttcatt
ttggcgccggtcaaagacaagcaaacggagctcggggagacgttcggtgaggcgtcgcag
aagtacaacgtgctgtttgtcggctactgcttgtcccatgaccagcgctggctgctggcc
tcctgcaccgaccaacacggagagctgctggagacctgcatcattagtgttgacgtaccc
aacagggcgcgcaggaaaaagggctcggccagacgagtgggtttgcagaagttgtgggag
tggtgtctcggcctggtgcaggtgacctcactgccatggagggtcgtcattggtcggctc
ggcaggatgggccacggcgagctgagagactggagtattctgctgagcagaaggaactta
cagtccctcagtaagcgcctgaaggagacatgtaggatgtgtggcatctctgctgcggac
actcccagcatccttagcgcctgtctggttgccatggagccccagggttcctttgtcatc
atgccagactcggtgtcgacaggttcggtgttcggtcgcagcaccacactcaacatgcaa
acatcgcagctgagcacccctcaggacacatcctgcacgcacatcctggtgttccctacc
tcagccatggtgcaggtcaacatcaacacttcggagcccatcgacatcaacttcaacccc
ataaatcccgacggatccgatggaatgggcctctttgacttgtttgacaacgacatggtg
gatccagacctcatcaacatcctgcccaactctcccacaacctcccccgttcactcgccc
ggctcccactaccaccaggggggagatggaagcaagggccagagtgccgatcggatggag
tcccacgaggaggctctgaacatcctgcagcagccgatggctttgggttactttgtctct
actgcaaaggccggtccgctgcccgactggttctggtctgcctgccctcaagcccagaac
cagtgccccctcttcctcaaggcctctctgcacctgcacgtgtcttctgtccaatcagac
gagcttctgcacagtaaacactcccaccccctcgactccaaccacacctctgatgtgctc
agatttgttctcgagcaatacaacgccctctcctggctgacctgcgaccctgcgactcag
gaccgccgctcctgtctgcctgttcacttcgtggtgctcacacagatgtacaactttatc
aagaacatgctctga
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