Embiotoca jacksoni (black perch): 138198171
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Entry
138198171 CDS
T10523
Symbol
smarca4a
Name
(RefSeq) SWI/SNF related BAF chromatin remodeling complex subunit ATPase 4a isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
138198171 (smarca4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eja03021
]
138198171 (smarca4a)
03036 Chromosome and associated proteins [BR:
eja03036
]
138198171 (smarca4a)
Transcription machinery [BR:
eja03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
138198171 (smarca4a)
Chromosome and associated proteins [BR:
eja03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
138198171 (smarca4a)
Chromatin remodeling factors
BAF complex
138198171 (smarca4a)
PBAF complex
138198171 (smarca4a)
GBAF(ncBAF) complex
138198171 (smarca4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
138198171
NCBI-ProteinID:
XP_069005516
LinkDB
All DBs
Position
Unknown
AA seq
1641 aa
AA seq
DB search
MSTPDPPMGGTPRPGPSPGPGPSPGSMMGPSPGPSPGSAHSMMGPSPGPPGSGHPHPPQG
PSGYPQDNMHQMHKPMEAMHEKGMPDDPRYAQMKGMSMRPGGLSGMGPPPSPMDQHSQGY
PSPLGGSDHAPSPVPANGPPSGPMMPGGPSGPGAVPMEGSGDPNHVMGQQNRGGPQGPGG
PPVAGGGPGGAGGPTPFNQNQLHQLRAQIMAYKMLARSQPLPEHLQMAVQGKRPMPGMQQ
QPMPNMPPTTGPGGGPGAGPGPAQANYNRPHGMVGPNMVPPGPAGVPPGMQGQPTNGPPK
PWPEGPMVNAAAPSNPPQKLIPPQPTGRPSPAPPSVPPAASPVMPPQTQSPGQPAQPPPM
MLHQKQNRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKANIE
LKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIE
QERKRRQKHQEYLNSILQHAKDFKEYHRSITAKIQKATKAVATYHANTEREQKKENERIE
KERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRAHKAAQALKEKKKK
KKKKKPETTDAGGALGPDGEPLDETSQMSDLPVKVIHVDSGKILTGVEAPKAGQLETWLE
MNPGYEVAPRSDSEESSSEEEEEEEEDDDQPQTSAAAAEDKKKIPDPDTEDVSEVDVQHI
IEHAKQDVDDEYSSASFNRGLQSYYAVAHAVTEKVDKQSSLLINGQLKQYQVKGLEWLVS
LYNNNLNGILADEMGLGKTIQTIALITYLMELKRLNGPFLIIVPLSTLSNWVYEFDKWAP
SVVKVSYKGSPAARRAFVPLLRSGKFNVLLTTYEYIIKDKQVLAKLRWKYMIVDEGHRMK
NHHCKLTQVLNTHYLAPRRVLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPF
AMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVL
YRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGYSG
GIVSGPDLFRSSGKFELLDRILPKLRATNHKVLLFCQMTTLMTIMEDYFAYRSFKYLRLD
GTTKAEDRGMLLKTFNDPASEYFVFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQ
DRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSGFERRAFL
QAILEHEEQDEVGVRGGCRTRGAWEEDEVPDDETVNQMIARSEEEFEQFMRMDLDRRREE
ARNPKRKPRLMEEDDMPSWILKDDAEVERLTCEEEEEKMFGRGSRQRKEVDYSDSLTEKQ
WLKAIEEGNLEDIEEEVRHKKTTRKRKRDRDHDGGPATPSSSSGRGRDKDEEVKKAKKRG
RPPAEKLSPNPQSLTKKMKKIVDAVIKYKDGNGRQLSEVFIQLPSRKELPEYYELIRKPV
DFRKIKERIRSHKYRSLNDLEKDVMLLCQNAQIFNLEGSLIYEDSIVLQSVFTSVRQKIE
KDDESEGEESEEEEEEIDEGSESESRSVKVKIKLTRKEKGERGGKGQRRRGRGARAKPVV
SDDDSEDEQEEERSASGSDED
NT seq
4926 nt
NT seq
+upstream
nt +downstream
nt
atgtccacccctgacccccccatgggagggacacctcggccaggtccctccccaggccca
gggccatctccaggaagtatgatgggcccgagtcctggtccctcgccaggctcggcccac
agcatgatgggccccagcccaggacctccgggatctggacatccccaccctccacaggga
ccctcaggatatcctcaggacaatatgcaccagatgcacaaaccaatggaagccatgcat
gagaagggaatgcctgatgaccctcgctatgcccagatgaagggtatgagcatgagacca
gggggactcagtgggatgggaccccctccaagcccaatggaccaacattcccaaggttac
ccctctccattaggaggctctgatcacgcaccaagccctgtcccggccaacggccctccc
tctggtcccatgatgcctggagggccctccggtccgggggcggtccctatggagggcagt
ggggaccctaatcatgttatgggtcaacaaaaccgtgggggtccccagggtcccggtgga
cctcctgttgcaggaggtggaccaggcggtgcaggtggacccactcctttcaaccagaac
cagttgcaccaactcagggctcagatcatggcctacaagatgctggcacgcagtcagccc
ctaccagagcatctgcagatggctgtgcaggggaagaggcccatgccgggaatgcagcaa
cagccaatgcccaatatgccccctactacagggcctggaggtggaccaggtgctgggcca
ggaccagctcaggcaaattacaatagaccacacggtatggtaggtcccaatatggtccct
cctggacctgcaggagttcccccaggtatgcaaggccagcctaccaacggaccccccaaa
ccatggcctgaaggaccaatggtgaacgctgctgctccatccaaccctcctcagaagctg
attccacctcagcccaccggcagaccctctcccgctcctccctctgtgcctccagctgcc
tccccagtaatgcctcctcagactcagtccccagggcagcctgcacagccccctcccatg
atgctgcaccagaagcagaaccgaataacccccatccaaaaaccccgcgggctggaccca
gtggagatcctccaggagagagagtaccggctacaggctcgtatcgctcaccgtatacag
gagctggagaacctgccgggctccttggctggtgatctgcgcaccaaggccaacatcgag
ctcaaggccctgaggctgcttaacttccagagacagctgcgtcaggaggtggtggtttgc
atgcgtcgtgataccgctttggagaccgctcttaatgcaaaggcctacaagcgcagcaaa
cggcagtctctccgtgaggcccgtatcaccgagaagctggagaaacagcagaagatcgaa
caagagcggaaacgtcgccagaagcaccaggaatacctcaacagcatcctgcagcatgcc
aaggacttcaaggagtaccaccgctccatcactgcgaagatccagaaggccaccaaagct
gtcgccacctatcatgccaacactgagcgcgagcagaagaaagagaacgagcgcattgaa
aaggagagaatgcggaggctgatggctgaagatgaagaaggttaccgtaaactcattgac
cagaagaaagacaagcgtctggcctatctgctacagcagacggacgaatacgtggccaac
ctcaccgagttggtgcgcgcccacaaagccgcacaagctctcaaagagaagaagaagaag
aagaaaaagaagaagccagagactacagatgctggtggtgctctgggacctgatggagag
cctttagatgagaccagtcagatgagtgacctgccagtcaaagtcattcatgtggacagt
ggaaagatcctgacgggtgttgaagcaccgaaggctggccagctggagacctggctggaa
atgaatccaggatatgaagtagcgccacgttcagacagtgaagaaagtagctcagaagaa
gaggaggaggaggaggaagacgatgatcagcctcaaacctctgcagctgcagcagaggac
aagaagaagattcctgaccctgacaccgaagacgtatcagaagtggatgtccagcacatc
attgaacacgccaagcaggatgttgacgatgagtacagcagtgcaagtttcaaccgaggc
ctgcagtcctactacgctgtcgctcacgctgtcactgagaaagtggataaacagtcgtca
ctgctgatcaatgggcagctcaagcaataccaggtcaaaggtctggagtggctggtttca
ctttacaacaacaacttgaatgggattctggctgatgagatgggtctgggaaaaacaatc
cagaccatcgccctcatcacttacctcatggagttaaagcgcctcaacgggcccttcctc
atcattgtacctctctcaactttatcaaactgggtgtatgagtttgataagtgggccccg
tctgttgtgaaggtctcctacaagggatctccagctgctcgtcgtgcattcgttccactc
ttgcgtagtggcaagttcaacgtgctgctcaccacatacgagtacattattaaagataag
caagtgttagcaaagctccgttggaagtacatgatcgtggacgaaggacatcgtatgaag
aaccaccactgtaagctgacccaggtcttgaacacgcactacttggccccacggcgtgtg
ctgctcacaggcaccccgctgcagaacaaactgcccgagctctgggccctgctcaacttc
ctgctgcccaccatctttaagagctgcagcaccttcgagcagtggttcaacgctcccttc
gccatgaccggagagaaggtcgacctgaatgaagaagagaccatcctgatcattcgccgt
ttacacaaggtgctccgacctttcctgctgcgccgactcaagaaagaagtggaggcccag
ctgccagagaaggtggaatacgtgataaagtgcgacatgtcggccctacagagggttttg
tacagacacatgcaggctaagggagtcctgctcacagatgggtcagaaaaagacaagaag
ggtaaaggtggcacgaagaccctgatgaacactattatgcaactgaggaagatttgcaac
cacccctacatgttccagcacattgaggagtctttctcagagcatcttggttattctggt
ggaatcgtgtccggccctgacctgttccgctcctctggaaagttcgagctgctggatcgc
atcttgcccaagctgagggccaccaaccacaaagtgctgctcttctgtcaaatgaccact
ctcatgaccatcatggaggactactttgcgtaccgcagcttcaagtacctccgtctggat
ggaaccacaaaagcagaggatcgcggcatgctgcttaagacattcaatgacccagcctcg
gagtactttgtgttcctgctgagtaccagggctggaggtctgggcctgaacctgcagtct
gctgataccgtcatcatttttgacagcgactggaaccctcatcaggacttgcaggcccag
gacagagctcaccgcattggtcagcaaaacgaagtgcgcgtgctccgcctgtgcactgtc
aacagtgtggaggagaaaatcctggcagcggccaagtacaaactgaacgtggaccagaag
gtcatccaggctggcatgttcgaccagaagtcctcaggctttgaacgtcgggccttctta
caggccattctggagcacgaggaacaggacgaggtcggggttcgaggaggctgccgcact
agaggggcgtgggaggaagacgaagtgcccgatgacgagactgtcaatcagatgattgcc
agaagtgaagaggagtttgagcagtttatgcgcatggacctcgacagacgccgcgaagag
gcccgcaacccgaagaggaaacctcgtctgatggaggaggacgatatgccaagctggatt
ctgaaagacgacgcagaagtcgagaggctaacctgcgaagaggaagaggagaaaatgttt
ggcagaggatcacgccagcggaaggaggtggattacagcgactcgctcactgagaaacag
tggctcaaggccatagaagagggtaacctggaggacattgaagaggaggtacgtcacaaa
aaaacaaccagaaagcgcaagagagaccgcgaccatgacggcggcccggccacacccagc
tccagcagcggccgtgggcgagacaaagatgaggaagtgaagaaagcaaagaaacgcggt
cgtccacctgccgagaagctctcgcccaaccctcaatccctcaccaagaagatgaagaag
atcgttgacgccgtcatcaaatataaggacggtaatggtcgacagctgagtgaagtcttc
atccagctcccctcgcgcaaggagctgccggagtattacgagctcatccgcaaaccagtg
gacttcagaaagatcaaagagaggatccggagccacaagtaccgcagcctgaacgacctg
gagaaggacgtgatgctgctgtgtcagaatgcccagatcttcaacctggagggctccctg
atctacgaggactccattgtgctccagtccgtcttcaccagtgtcagacagaagatcgag
aaggacgacgaaagtgaaggggaggaaagcgaggaagaggaggaggagatagacgaaggc
tccgaatctgaatcgcgttcggtgaaggtgaagatcaaactgacccggaaagagaaaggg
gagcgaggaggaaaaggacaacgacgaagaggccgcggcgcccgggctaaacccgtggtg
agcgacgacgacagcgaggatgagcaggaagaggagcgttcggccagtggcagcgatgag
gactga
DBGET
integrated database retrieval system
