Embiotoca jacksoni (black perch): 138198271
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Entry
138198271 CDS
T10523
Symbol
cpsf4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
138198271 (cpsf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eja03021
]
138198271 (cpsf4)
03019 Messenger RNA biogenesis [BR:
eja03019
]
138198271 (cpsf4)
Transcription machinery [BR:
eja03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
138198271 (cpsf4)
Messenger RNA biogenesis [BR:
eja03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
138198271 (cpsf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_3
zf-CCCH_2
zf-CCHC
zf-CCCH_4
zf-CCHC_3
Nab2-like_zf-CCCH_
zf-C3H1
Motif
Other DBs
NCBI-GeneID:
138198271
NCBI-ProteinID:
XP_069005701
LinkDB
All DBs
Position
Unknown
AA seq
265 aa
AA seq
DB search
MQDLLANVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGSAVCEFFMRAACQKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPDCRHRHTRRVICVNYLVGFCPEGKSCKFMHPRFELPMGASEQPP
LPQQNQNQTKPMPNIGRSSLSLIQLTNSSPGHRPQNNMMAASQQNHMTANRGPRPLDQVT
CYKCGEKGHYANKCTKGHLAFLSGQ
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacttgctggccaacgtggatcacatcaagttcgacctggagatcgccgtggag
cagcagctgggagcgcagcctctgcccttccccggcatggacaagtccgggtcggcggtg
tgcgagttcttcatgagagcagcttgtcagaaaggtgggatgtgtccgttccgtcacatc
agcggagagaagacggtggtgtgtaagcactggctcagaggactgtgcaagaagggagac
cagtgcgagtttctccacgaatatgacatgaccaagatgcctgaatgctacttctactcc
aagttcggcgagtgcagcaacaaggaatgtcccttcctgcacatcgatccagagtccaag
atcaaagactgtccctggtacgaccgaggcttctgcaaacacggtcccgactgcagacac
agacacacaagaagagtgatctgcgtgaactacctggtgggcttctgtccagaggggaag
tcctgtaaatttatgcacccccgctttgagctgccgatgggagcttctgaacagcctcct
ctgccacagcaaaaccagaaccagacaaagcctatgcctaatataggccgctcgtcgctc
tccttaatccagctgaccaactccagtccgggacaccggccgcagaacaacatgatggcc
gcctctcagcaaaatcacatgactgccaacagagggcctcgtccactggaccaggtcacc
tgctacaagtgcggtgagaagggccactatgccaacaaatgcaccaaaggccaccttgcc
ttcctgagtggacagtaa
DBGET
integrated database retrieval system
