Embiotoca jacksoni (black perch): 138198339
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Entry
138198339 CDS
T10523
Symbol
ciita
Name
(RefSeq) MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
eja Embiotoca jacksoni (black perch)
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
eja01001
]
138198339 (ciita)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
eja04054
]
138198339 (ciita)
Enzymes [BR:
eja01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
138198339 (ciita)
Protein kinases [BR:
eja01001
]
Serine/threonine kinases: Other
TAF1 family
138198339 (ciita)
Pattern recognition receptors [BR:
eja04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
138198339 (ciita)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
LRR_14
NPHP3_N
AAA_16
nSTAND_NTPase5
nSTAND3
AAA_22
AAA
NB-ARC
TsaE
Motif
Other DBs
NCBI-GeneID:
138198339
NCBI-ProteinID:
XP_069005807
LinkDB
All DBs
Position
Unknown
AA seq
1250 aa
AA seq
DB search
MKFRAAWSLLRIGENTAGSSAVLSIIQGDPTDAKMLEVDQDPFISEFGDLPDDLLEYMMV
DYPDTNLLFDDSSLKNTDELGDVPIATEVPSPGDHQQEQNNKQTDKTKTRRKSKRVPQSQ
LWTNENPTAKRQRTTGQPKNNETQAEPAVVQGAHTGSWPSPTETVRGMSTPPPKILHVYH
SPSAHRIPIQFITIPDSPGYQVVHLSPPPPVIQLPLPNTAAAPTYILVPAASPPSRHRVP
PLSPTNGAVAPTHMSSSPSGSLTASKAMSPSCASPVSPSSEIMSLHKESPLPQSPAVIDI
PQVVKDYIQEAKVHMSQTCQDMEPGLSLTSHYVEVQVCQREILRSGKTTSKCLDKELIIM
GDTDRQKTLLGPSQIFESSNGDKPKRYILLLGNAGMGKTTLIKKLCLDWSRDCIPQFDFV
FLLDGKDLTLTEPTYSLQTLLLNLSCSAPSCMDPDTVYAQILAAPKRVLIIFDGFDELQN
YETLLQAPEKDSITSLQKDSKAQTFTVRQLYFAILQRVLLPGCTLLLSTRPRGAATQLLR
RVDSLLEVCGFTSANVETYLSQYFTPLALRASALDFLKSSRYLHFLCCNPALCQMVCLVL
EQSKSSEVLPRTLTELCHQVLCLKLEKDSGGTYSYVAAQTQISETQTQTSNSSQVKRCHK
NNRTTSRAQVRTSSHTQRARRTKQQKKEEDKVGEEMTVGREGTKTENRELLLQLSSLAWE
RVKDKSSTLSKGQAITAKLKAFGLRTGLFLSHHLRKRPLESSGEKEEGRAEDKCEMGGEQ
KGERKENRRRTDIEDVDAHDDHVLLWANPFLKSYLAAVHLSLSRTVSERTFLQTLSFQLG
PKGRPKPQREEMELTQRFVVGLLFHNRTTLQRLHSYTERVFRDVVVSKLAVVTKHLEGLS
FGDLSPAQVLETCHYVYEASLTHDESSRDSASTRLMNRLVANLPESLTFHRVPLSLPHVF
IVQNALERGATEGRTFCLDLEDSGIPICGLRALVGLKNIKTYRACIADVITLWEQLQQSG
DEELLKGAVSKFKIHPLKATQVCHIEHLAKLVNIHVHKSLSDSSSQSDSILAEGVPAVRE
LHKLELELSPEIGPRALPKLLDLLPVLQNLQHLDLENCKIGDKGAEKLANALVSLCSLEI
LNLSQNCIEDQGVKKLTTTLKHLPKLHCLSLYSNGISDEGAESLAAILPQMTSLTDLDVT
YNKLTDVGAQSLGASLRNCKKMKTLRMWNHFIPGGVFERLQQQDSRILCQ
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttcgcgcggcttggagtttgctgcgcatcggggaaaatacagcaggaagttca
gctgtcctgagcatcatccagggagacccgacagatgccaaaatgctggaagtggaccag
gaccccttcatctctgaatttggagatttgccagatgatttattagaatacatgatggtt
gattaccctgatacaaatttgctctttgatgattcatcgttgaagaacacggatgaactc
ggtgacgttcccatagcaacagaagtacccagccctggggaccaccagcaggaacagaac
aacaaacaaacagacaaaacaaaaacgaggaggaaaagtaagagagtcccccagtcacaa
ctatggactaatgagaaccccacagcaaaaaggcaaagaacaacaggtcaaccaaaaaac
aatgagacgcaggctgagccagctgttgttcaaggtgcccacacaggatcatggccaagt
ccaacagagactgtgagaggcatgtccaccccgccaccaaaaatccttcatgtctaccat
tccccttcagcacatcgcattcccattcagttcatcaccatcccggactctccagggtac
caggttgtccatctctctcctcctcctcctgttattcagctgccgctacccaacacagct
gctgcaccgacatacatactcgttcctgctgcctcaccaccctccagacaccgagtgcca
ccactctcaccaacgaacggtgcggtagcgccgacccacatgagttcatccccatcaggt
tctctcacagctagcaaagccatgtctccctcttgtgcctcacccgtctcccctagtagt
gagatcatgtctcttcacaaggagtcacctcttcctcagtctcctgctgttattgacatt
ccacaggttgtaaaggactacattcaggaagccaaagtccacatgagtcaaacctgccag
gatatggagccaggtctgagcttgacctctcattacgtggaagtacaagtgtgccagaga
gagattcttcgctctggaaaaaccacaagcaaatgcctggacaaggaactaatcatcatg
ggagatacagatcggcaaaaaaccttgctgggaccgagtcagatctttgaaagctcaaat
ggagacaagccgaaacgctacattttgctgcttggaaacgctggcatgggaaaaaccact
ctgatcaagaagctgtgccttgactggtccagagactgcatcccccagtttgactttgtc
ttcttattagacggcaaagacctcactttaacagagccgacctacagccttcagacgctg
cttctcaacctctcctgctctgccccgtcctgcatggacccggacacagtgtatgctcaa
atccttgcagcccccaaacgagtgctcatcatttttgatgggtttgacgagttgcagaac
tatgaaactctactccaggctccagaaaaagactccataacatcattgcagaaagacagt
aaggcacagaccttcacagtcaggcagttatactttgccatccttcagagagtccttctt
ccaggctgcactctgctactctccacccggcctagaggtgctgccacccagctactccgc
cgcgtggacagcctcctggaggtgtgtggctttacctcagcaaatgtagagacatatttg
tctcaatacttcactcctcttgctctcagagcatctgctttggactttttaaaaagtagc
agatatctacatttcctctgctgtaacccggcactgtgtcagatggtgtgcctggtttta
gaacagtccaaaagttcggaggtcctaccaagaactttgactgagctctgtcatcaagtg
ctttgtctaaaactggaaaaagacagtgggggcacatactcatatgttgcagctcaaaca
caaatatctgaaacccagacacaaacctcaaatagttctcaagtgaagcggtgtcacaaa
aataatcggacaacgtccagagcacaggtacgcacttcatctcacacccaaagagcaaga
agaacaaaacaacagaagaaagaggaagacaaagtgggtgaggaaatgactgttggcagg
gaaggaactaaaacagagaacagggagttgctgttgcagctgagctctttggcctgggag
agggtcaaagacaagtcctctaccctgtccaaaggacaggccataactgccaaactcaag
gcgttcggcctcaggactggtctctttctctctcatcacctgaggaagaggccgttggaa
tcaagtggtgagaaggaggaaggaagagcagaagacaaatgtgagatgggaggagaacag
aaaggagagaggaaggaaaacagacggaggacggacattgaagatgttgatgcccatgat
gaccacgtcctgttgtgggccaacccttttcttaagagttacctggcagcagtccatttg
tctttgtcaaggactgtatcggaacgaacttttctccagaccctctccttccagttaggt
ccaaagggtcgaccgaaacctcaaagggaggagatggagctcactcagcgatttgttgtc
ggcctgctcttccacaacaggacaacactgcagaggcttcattcatacacagagagagtc
ttcagagatgtggtcgtcagcaagctggctgtggtaacaaaacatttggaaggtctttcc
tttggtgacctgagccctgcccaggtgcttgagacatgccactatgtttatgaggcaagt
ttgacccatgatgagagtagcagagactctgccagcacacgactgatgaatcgtctggta
gcaaatcttcccgaatccctgacatttcacagagttcctctcagcctgccacatgtgttc
atcgtgcagaacgctctcgaacgaggtgcaaccgaagggagaactttttgtttggatctg
gaggactctgggataccaatctgtggactcagagctctggtgggcctcaagaacatcaag
acatacagggcatgcatcgctgatgtcatcaccctctgggagcagctacagcagagtggt
gatgaagagctcctgaaaggggcagtgtccaagttcaagatccaccctctgaaagcaaca
caagtgtgtcacatagagcacctggcaaagctggtcaacatacatgtgcacaagagtcta
tcagacagttccagccaatcagattccatcctggcagagggagtaccagcagtcagagag
ctacacaagctggagcttgagctcagtccagagatcggtccccgggctcttcctaagttg
ttggatctccttccagtgctgcagaacttgcagcacttggatctagagaattgtaagata
ggggacaaaggagcggagaaactggctaatgcattggtctcactgtgttccctggagata
cttaatctgtcacagaattgtatagaagaccagggagtaaagaaactgacgaccacactg
aagcacctgcccaaactgcactgtttaagtctctacagtaatgggatctctgacgaaggg
gcagagagtttagctgctatcctcccacagatgacatccctcactgacctggacgtgacg
tataacaagctgacagatgttggagcacagagcttgggagccagtctgagaaactgtaaa
aagatgaagactttaaggatgtggaaccattttatcccaggcggagtttttgagagactt
cagcagcaggacagtcggatcctttgccaatag
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