Embiotoca jacksoni (black perch): 138198481
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Entry
138198481 CDS
T10523
Symbol
rbb4l
Name
(RefSeq) histone-binding protein RBBP7 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja03082
ATP-dependent chromatin remodeling
eja03083
Polycomb repressive complex
eja04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
138198481 (rbb4l)
03083 Polycomb repressive complex
138198481 (rbb4l)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
138198481 (rbb4l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
eja03036
]
138198481 (rbb4l)
Chromosome and associated proteins [BR:
eja03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
138198481 (rbb4l)
Histone modification proteins
HAT complexes
HATB complex
138198481 (rbb4l)
HDAC complexes
Sin3A-HDAC complex
138198481 (rbb4l)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
138198481 (rbb4l)
PRC2.2
138198481 (rbb4l)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
138198481 (rbb4l)
Heterochromatin formation proteins
Other heterochromatin formation proteins
138198481 (rbb4l)
Chromatin remodeling factors
NuRD complex
138198481 (rbb4l)
NuRF complex
138198481 (rbb4l)
NuRF complex (fruit fly)
138198481 (rbb4l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_DCAF12
WD40_RFWD3
ANAPC4_WD40
Beta-prop_RIG_1st
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_SPT8
MIOS_WD40
NBCH_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
138198481
NCBI-ProteinID:
XP_069006014
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MADKEVYDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVNRPEGKDY
AVHRLVLGTHTSDEQNHLVIASVQVPNDDAQFDASHYDSEKGAEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCILATKTPTSDVLVFDYTKHPSKPDPSGECSPDLRLKGHQKEG
YGLSWNPNLSGNLLSASDDHTICLWDIGAGPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKASHAVEAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE
DGPPELLFIHGGHTAKISDFTWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPDNTPAS
ELEAQGS
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggccgataaagaggtgtacgacgatgcggtggaggagcgggtgatcaacgaggagtac
aagatctggaagaagaacacgcccttcctgtacgacctggtgatgacccacgctctggag
tggcccagcctcacggtgcagtggctccccgacgtcaacaggccggaggggaaggactac
gccgtccaccggctggttctggggacacacacctcggatgagcagaaccacctggtgatc
gccagcgtccaggtaccgaacgacgacgcccagttcgacgcctcgcactacgacagcgag
aaaggagcagagtttggaggatttggttcagtgagcggaaagattgagatcgagatcaag
atcaaccacgagggcgaagtgaaccgagcgcgctacatgccccagaacccctgcatcctc
gccaccaagacccccacctccgacgtgctggtgttcgactacaccaagcacccgtccaag
ccagatcccagtggggagtgcagtcctgacctgaggctgaaaggtcaccagaaagaaggc
tacggtctctcctggaacccgaacctgagcgggaacctcctcagcgcctctgatgaccac
accatctgtctgtgggacatcggcgccggcccgaaggaggggaaggtggtggatgccaag
accatcttcacaggccacaccgccgtggtggaggacgtctcctggcatctgctgcacgag
tccctgttcggctctgttgccgacgaccagaaactcatgatatgggacactcggtccaac
aacacgtccaaagccagccacgcggtggaggctcacactgctgaggtcaactgtctgagc
ttcaacccctacagcgagttcatcctggccaccggttcagctgataagactgttgcatta
tgggatctcaggaatctcaaactgaagctgcactcctttgagtcccacaaagatgaaatt
ttccaggtgcagtggtcccctcacaacgagaccatcctggcctccagcggcaccgaccgc
cgtctcaacgtctgggacctcagtaaaatcggggaggagcagtcggcggaggacgctgag
gacggacctccggagctgctgttcatccacggcggccacacggccaagatctctgacttc
acctggaaccccaacgagccctgggtcatctgctccgtgtccgaggacaacatcatgcaa
gtgtggcagatggcagagaatatctacaacgacgaggagcccgacaacacgcctgcatca
gagctggaggctcagggatcataa
DBGET
integrated database retrieval system
