Embiotoca jacksoni (black perch): 138198736
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Entry
138198736 CDS
T10523
Symbol
rxrgb
Name
(RefSeq) retinoic acid receptor RXR-gamma-B isoform X1
KO
K08526
retinoid X receptor gamma
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja03320
PPAR signaling pathway
eja04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
138198736 (rxrgb)
03320 PPAR signaling pathway
138198736 (rxrgb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eja03000
]
138198736 (rxrgb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
eja03310
]
138198736 (rxrgb)
Transcription factors [BR:
eja03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
138198736 (rxrgb)
Nuclear receptors [BR:
eja03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
138198736 (rxrgb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nuc_recep-AF1
Hormone_recep
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
138198736
NCBI-ProteinID:
XP_069006431
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MWHPMASPATGGSPGREIGHYSTGPMSTAHTHPSMGGMVGHPSVISTSRPLQSPMSTLGS
PMNGLASPYPVITSSLGSPSVSLQSTPNMNFGPISSPQMNSMNNVSSSEDIKPPPGLQNL
GNINYQCTSPGGMSKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDSKEC
LIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKERGENEVESTSSFNEDMPVDKILD
AELAVEPKTETYSDGSPSNSTNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVIL
LRAGWNELLIASFSHRSVTVKDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKDM
QMDKTELGCLRAIVLFNPDAKGLSNPPEVEGLREKVYASLESYTKQKYPDQPGRFAKLLL
RLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQIT
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtggcaccccatggcatcacctgcaactggaggcagccctgggagggagataggtcac
tactctacagggccgatgagtacagcccacacccatccttcaatgggtggcatggtgggt
cacccgtccgtcatcagcacctccaggcccctacagtcccccatgtccaccttgggctcg
ccgatgaacggcctggcctcgccctaccccgtcattacatcgtctctaggctctccctct
gtatcgctgcagtctactcccaacatgaactttggacctatcagcagtccacagatgaac
tctatgaacaatgttagcagctcggaggacatcaagcctccgccaggcctgcagaacctg
gggaacatcaactaccaatgtacgagcccgggggggatgtcaaagcacatctgcgccatt
tgtggggaccgctcctcaggaaagcactatggcgtgtacagctgtgaaggatgcaaaggc
ttcttcaagaggaccgtccgtaaagatctcacctacacatgtcgagacagcaaggagtgc
ctgattgacaagcgccagcgaaaccgctgccagtactgtcgctaccagaagtgcctggcc
atgggcatgaagagggaagcggtgcaggaagagaggcagcgtgggaaggagcggggggag
aacgaagtagagtctaccagcagtttcaatgaggacatgcctgtggacaagatcctggat
gctgagttggcggtggagcccaaaacagagacgtacagcgacggcagccccagcaactca
accaacgaccctgtcaccaatatttgccaagcagcagacaagcagctcttcactctggtg
gagtgggccaaaaggatcccgcacttttcggaacttcccctggatgaccaggtcatccta
ctacgagcaggctggaatgagctgctcatcgcctctttctcacatcgctcagtcacggta
aaagacggcatcctgttggcaacaggtcttcacgtccacagaagcagcgcccacagtgct
ggagtgggctccatctttgacagagtcctcacagagttggtatctaaaatgaaagatatg
caaatggataaaacagagctcggctgcctgcgagccatcgtcctcttcaacccagatgca
aaaggtttgtcaaacccaccagaggttgagggactgagggaaaaggtctacgcttcactg
gagtcgtatacaaaacagaagtacccagaccagcccggcaggtttgccaaactgttgctc
cgcctgcccgccctgcgctccatcggcctcaagtgtctggagcatctgttcttcttcaag
ctaatcggcgacacgcctatcgacaccttcctgatggagatgctggaggctccgcatcag
atcacatga
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