Embiotoca jacksoni (black perch): 138199088
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Entry
138199088 CDS
T10523
Symbol
rad54l
Name
(RefSeq) DNA repair and recombination protein RAD54-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
138199088 (rad54l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eja03400
]
138199088 (rad54l)
DNA repair and recombination proteins [BR:
eja03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
138199088 (rad54l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
Rad54_N
Motif
Other DBs
NCBI-GeneID:
138199088
NCBI-ProteinID:
XP_069007121
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MRRSLAPSQVAKRKQGGDSCEDEDWTCRSEKRRKSDHEMRSSYISPFRKPFTQVNNQPAV
TDGDRHEAFIRSILSKPFKVPIQNYTGSLGIRALGLKRAGVRKALHDPFAEDALVLYEPP
TLTPHDLIKADKEKLPVHVVVDPVLGKVLRPHQREGVKFLWECVTGRRIAGSYGCIMADE
MGLGKTLQCITLMWTLLRQSPDATPEIDKAIVVSPSSLVRNWSAEVGKWLGGRVTPVAID
GGSKEEIDRKLVNFMSQRGLRVPTPILIISYETFRLHAAVLHKGKVGLVICDEGHRLKNS
DNQTYQALNAMSAQSRVLISGTPIQNDLLEYFSLVHFVNAGILGTAQEFKKHFELPILKG
RDAMASDKERQSGEEKLKELIGIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELY
KRFLRQAKPIETLQHGKISVSSLSSITSLKKLCNHPALVYEKCVQGEEGFEGALDLFPPG
FCNKAVEPQLSGKMLVLDYILAMTRTTTSDKVVLVSNYTQTLDLFEKLCRSRRYLYVRLD
GTMSIKKRAKIVERFNSPSNPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAM
ARVWRDGQKKTCYIYRLLSTGTIEEKILQRQAHKKALSSCVVDEEQDVERHFSLGELREL
FTLNEETASDTHDKFRCRRCVNSREVRPPADDSDCTGDLSQWNHCFDRKGLRDPVLRASW
EAAVSFVFHQRSHEDQKGIV
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgagaaggagtctcgcccccagtcaggtcgctaaacggaaacaaggaggggattcctgt
gaagatgaggactggacgtgtagatctgagaaaagaagaaaaagtgatcatgagatgaga
agcagctacatctctcccttcagaaaacctttcacgcaggtgaacaaccagcctgcggtc
acggacggcgaccgacacgaggcgtttatacggagcatcctctccaagccttttaaagtt
cccatccaaaattacacaggctcgctgggaatcagggctcttggtctgaagcgtgccggc
gtgaggaaagcgcttcatgatccctttgcagaagatgccttggttctttacgagcccccg
actctgaccccccatgacctgatcaaagctgacaaagaaaaactccccgtccatgttgtt
gtggatccagttttaggaaaagtgctgagaccccatcagagagagggggtgaagttcctg
tgggagtgtgtgacggggaggcgcatcgcaggatcctacggctgcatcatggcagatgag
atgggtctggggaagactttgcagtgcatcaccctcatgtggaccctgctacgccaaagc
cccgacgccacgccggagatagacaaggccatcgtggtctcgccctccagtctggttcgc
aactggtccgccgaagtaggaaagtggctgggaggacgcgtcacaccggtcgccatcgac
ggaggttcaaaggaggagatcgacaggaaactagtgaacttcatgtctcagcgcggttta
agagtgccgacccccatcctgatcatttcatacgagacctttcggctgcacgctgccgtt
ctgcacaagggcaaagtcggacttgtcatctgcgacgagggccaccggctgaagaactct
gacaaccagacgtaccaggctctcaacgccatgagcgcccagagcagagtgctgatatcg
ggcacgccgatccagaacgacctgctggagtacttcagtctggtccactttgtaaatgcc
ggcatcctcggtacagcccaggagtttaaaaagcattttgagcttcccatcctgaagggt
cgcgatgcgatggccagcgataaagagcgacagagtggagaagagaaactcaaagagctg
atcggcatcgtcaacaggtgcttgataaggagaacgtctgatatattgtcgaagtatctt
cctgtgaaaatcgagcaggttgtgtgttgcaggctgactcctctgcagactgaactgtac
aagcgcttcctgaggcaggccaaacccatcgagaccttacaacacggcaaaatcagtgtc
tcgtctctgtcttccatcacatcactcaagaaactctgcaatcacccagctcttgtgtat
gagaagtgtgttcagggcgaggagggcttcgagggggcgctggatctgtttcctcccggc
ttctgcaataaagctgtggaacctcagctctctgggaagatgctggttcttgactacatc
ctagcgatgaccaggacgacgacgagtgacaaggtggtgctcgtctccaactacactcag
acactggacctgtttgagaagctgtgcagatctagaagatacctttatgttcgactggac
ggcaccatgtccatcaagaaaagggccaagattgtggagagattcaacagtccatcgaac
ccagagtttatcttcatgctgagcagcaaggctggtgggtgtggcctcaatctgattggc
gctaatcgcctggtgatgtttgatcccgactggaacccggccaatgacgagcaggcgatg
gctcgggtgtggagggacggccagaagaagacctgctacatctacagacttctctctacg
gggaccatcgaggagaagatcctgcagagacaggcccacaagaaggcgctgagcagctgc
gtggtggacgaggagcaggacgtggagcgccacttctctctcggggaactccgagaactc
ttcaccctcaacgaggagaccgccagcgacacgcatgacaagtttcgctgccgtcgctgt
gtgaactccagagaggtgcggcctcctgccgacgactccgactgcaccggcgacctctcc
cagtggaaccactgcttcgacaggaagggcctgagggacccggtgctgagggcctcctgg
gaggctgccgtctccttcgtcttccaccagcgctcacacgaggaccagaagggcatcgta
tag
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