Embiotoca jacksoni (black perch): 138199117
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Entry
138199117 CDS
T10523
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja03030
DNA replication
eja03410
Base excision repair
eja03420
Nucleotide excision repair
eja03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
138199117 (rfc4)
03410 Base excision repair
138199117 (rfc4)
03420 Nucleotide excision repair
138199117 (rfc4)
03430 Mismatch repair
138199117 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eja03032
]
138199117 (rfc4)
03036 Chromosome and associated proteins [BR:
eja03036
]
138199117 (rfc4)
03400 DNA repair and recombination proteins [BR:
eja03400
]
138199117 (rfc4)
DNA replication proteins [BR:
eja03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
138199117 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
138199117 (rfc4)
Chromosome and associated proteins [BR:
eja03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
138199117 (rfc4)
DNA repair and recombination proteins [BR:
eja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
138199117 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
138199117 (rfc4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
RCF1-5-like_lid
DNA_pol3_delta2
AAA_lid_RFC1
Rad17
AAA_assoc_2
AAA_16
AAA_22
AAA_30
AAA_11
Mg_chelatase
DUF815
SLFN-g3_helicase
AAA_19
Gp44_lid
AAA_28
AAA_14
RuvB_N
Cdc6_lid
AAA_24
AAA_5
ResIII
wHTH-PRTase_assc
AAA_7
AAA_3
DNAX_ATPase_lid
Motif
Other DBs
NCBI-GeneID:
138199117
NCBI-ProteinID:
XP_069007163
LinkDB
All DBs
Position
Unknown
AA seq
357 aa
AA seq
DB search
MQAFLKGPTGHSTRPHKDKAAAGPGSERRVKAVPWVEKYRPKCVDEVAFQEEVVAVLKKS
LEGADLPNLLFYGPPGTGKTSTILAAARELYGPELYRQRVLELNASDERGIQVVREKVKN
FAQLTVAGTRSDGKPCPPFKIIILDEADSMTAPAQAALRRTMEKQSRTTRFCLICNYISR
IIEPLTSRCSKFRFKPLDNRIQEERLLEICDKENLKYTKESIAALVQVSEGDLRKAITFL
QSAARLNADQEMTEHAVTEIAGVVPSNMIDSLLHICFKGTFEKLEVSVRDMVDDGYAATQ
ILSQLHESIIERDLSDKQKSAITEKMAVVGKCLSDGADEYLQVLSLCSLIMQQASHN
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcctttctgaagggaccgaccggtcactccaccagacctcacaaagacaaggca
gcagctgggcccggctcggagaggagagtcaaggccgttccctgggtagagaaatacagg
ccgaagtgtgtcgatgaggtggcctttcaggaggaggtggtggcagtgctcaagaagtct
ctggaaggagcagatcttcccaacctgctcttctacggccctcctggaacaggaaagacg
tcgaccatcctcgctgctgccagagagctttatggtccggagctgtacagacagagagtc
ctggagctcaacgcctccgacgaacgaggcatccaggtcgtcagagagaaggtcaagaac
tttgctcagctcaccgtggcagggactcgctccgatgggaagccgtgtcctccattcaag
atcatcatcctcgatgaggcggactccatgacggcaccggctcaggccgctctcagacgg
accatggagaagcagtctcgcaccacccgcttctgtctcatctgtaactacatcagcagg
atcatcgaacctctgacctccaggtgctccaagtttcgctttaaacctttagacaatcgg
atccaagaggagcgtctgctggagatctgtgacaaggagaacctcaagtacaccaaagag
agtatagcagcgttggtgcaggtatccgagggagacctacggaaagccatcacatttctc
cagagcgccgcacgcctcaacgccgaccaggaaatgactgagcacgctgtcactgaaata
gctggagtcgttccctccaacatgattgacagcttgctccacatctgcttcaaaggaaca
tttgagaagttggaggtatcagtgagggacatggtggatgacggctacgcagccacacag
atcctgagtcagctccacgagtccatcatagagcgggacctgagcgacaagcagaagtca
gccatcacagagaagatggcggttgtggggaagtgcctgtcagacggtgcagacgagtac
ctgcaggtgttgagtctgtgttcgctcatcatgcagcaggcctcccacaactaa
DBGET
integrated database retrieval system
