Embiotoca jacksoni (black perch): 138199244
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Entry
138199244 CDS
T10523
Symbol
trpa1b
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1b
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
eja Embiotoca jacksoni (black perch)
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
eja04040
]
138199244 (trpa1b)
Ion channels [BR:
eja04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
138199244 (trpa1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
Ank_KRIT1
Motif
Other DBs
NCBI-GeneID:
138199244
NCBI-ProteinID:
XP_069007279
LinkDB
All DBs
Position
Unknown
AA seq
1118 aa
AA seq
DB search
MNFSRDVARQTSCYTYVIEDEDSALASLNVFELTGKGDLALLENVVQKSPEVLTEKDECG
AGPLHHAAAGGHVNLIQFITTVIDSQELNSGDEQGNTPLHWAVERNRAESCRALLDLNVD
PNILNKALLSPLHLAVSHGHNNLVELLLSYGTTDCNLQGDLGNTPVMLACSINNCEALNI
LMKRGAKLCQQNKLGHFPMHAAAFAGATKAMEVILKAGEEFGHTPVGHINYLDKSMSSPL
HLAVRGGNIETICLCIDTGARVDQQQNDKSTPLHLACTQGATEVVKLMLSSVDQVEDIIN
LPDGACQTPLHRATIFDHAELAEYLISLGADLNSIDCKGNSPLLLATSCGAWKTVALMLS
KGANVNMTDGCGCNFLHLAILQPKGLKNLSEEVLQQNSVKALLSCEDNEGCTPLHYACRL
GIHDSVKNMLGLSGQLGLACKSKDKKSALHFAAQYGRVNTCHRLLETITDSRLLNEGDER
GLTPLHLASREGHTKVVQVLLRKGALFHSDYKGWTCLHHAASQGYTQTMDILLSANLKLL
DKSDEDGNTALHIAAREGHVAAVRLMLSRGAEITLNKNDTSFLHEALQNGKKDVVNAVVD
SDSCSKALKTFIPGSSQRCPILDMIEVLPETYKHLLDRSVRESDDDPNSPEYHIEYNFKW
LQPPVAVKKLTDEAMKFQPLIALNAMVRYNRMELLNHPVCKKYLAMKWVAYGSTAHMLNM
FLYMLGLLPLTHLIVTLRPSMNMTETGEHNITMVPISFMEQSLFLSICIVMVLTINIYSI
GKELVQISQQRWMYFTDFSNQFDWVSAICSLLFIIPIMLNAEGSLHWQAGALAVINSWFG
FLLYLQRFEGVGIYVVMFGEIMKTLFRVIMLFVYMMLAFSLAFHALMLNQKEFDTVPLSV
VQTFVMMVGELNYQNNFLEAYLKNELPFSALTYFIFVQFVLLMPILLVNLMIGLAVGDIA
EVQRNAALKRIAMQIDLHTALEDKLPYWFMKRVDKPSITVYPNRKCSQFLLRTLIVGEEE
TNEMRSHLQARSQSSSWIENELKKQKYRMKEMSSMLEKQHGLLKLIIQKMEITSEADEYD
GPVNVRGSVWPNLSQTKPRGHSRSRWVPLMKAIESKKK
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcagcagggatgtggctcggcagaccagctgttatacatatgtgatcgaggac
gaggattcagccctggcgagtttaaatgtatttgagttgaccgggaagggtgacctggct
ctcctggagaacgtagtgcaaaagagcccagaggtcctgactgagaaagatgaatgtgga
gccggtccccttcatcacgctgccgcagggggccacgtcaacctcattcaattcatcacc
actgtcatagactcacaggagctgaacagcggtgatgagcagggcaacacgcccttacac
tgggcagtggagaggaacagggcagagagctgcagggctctgttggacctgaatgttgac
cccaacatcctcaacaaggccctgctgtccccgctgcacctggctgtcagccacggacac
aacaacctggtggagctgctgttgtcctacggcactacagactgcaatctacagggagac
ctcgggaacaccccggtgatgctggcctgttccatcaataactgcgaagcactcaacata
ttgatgaagcgcggagcgaagctctgccagcagaacaagctcggccatttccccatgcac
gctgctgccttcgcaggtgctacgaaagccatggaagtgattctgaaggccggagaggag
tttggccacacacctgtgggccacatcaactatttggacaagtccatgagcagtcccctc
catctcgctgtacgaggtgggaatatcgagaccatctgtctctgcattgataccggagcc
agagttgaccagcaacagaatgacaagtctacaccgcttcatttggcctgcacccaggga
gctactgaggtagtcaaattgatgctctcctctgttgaccaagttgaagacatcatcaac
ctgcctgatggggcgtgtcagactcctctacacagggctacaatatttgaccacgcggag
ctggcagagtacctcatttctttgggtgcagacctgaacagcattgattgtaagggaaac
tctcccttgctgctggctacgagctgtggagcatggaaaactgtggctctgatgctgtct
aaaggggcaaatgtaaatatgacagacggatgcggctgtaacttccttcacctggccatt
ctgcagcccaagggtctgaaaaatctctccgaggaagtgctgcagcaaaacagtgtgaag
gcattactgagctgcgaggataatgagggctgcacgcccctccactacgcttgcagactg
ggcatccatgactcagtgaagaacatgctgggcctgtcggggcagctcggcctcgcatgc
aagtccaaggacaagaagtctgccctgcactttgccgctcagtacgggcgcgtcaataca
tgtcatcgattattagagaccatcacagactctcgtctgctaaatgaaggggatgaacgg
ggcctgacaccacttcatttggcctcaagagaggggcacactaaggtggtgcaggtgctg
ctgcgcaaaggagctctctttcacagcgattacaagggctggacttgtctgcaccacgct
gcatcccaaggatacacacaaacgatggacatcctactgtcagccaatctcaagttactg
gataaatcagatgaggatgggaacacggcattacacatcgcagcaagagagggacatgtg
gctgcggtccggctcatgctgagcaggggggcagagatcaccttaaacaagaacgacact
tccttcctccatgaagctttgcaaaatgggaaaaaagatgtggtcaatgccgtcgttgac
agtgacagctgttctaaggctctgaaaacgttcattcccggctctagccagcgatgtccc
atactagacatgattgaggttctgcctgagacttacaagcatctcctggaccgaagtgtg
agggagtcagatgacgaccccaacagtcctgaataccatattgagtataatttcaaatgg
ctccagcctcccgtagcagtgaagaagttaactgacgaggccatgaagtttcaaccactg
attgcactcaatgcgatggtgcggtacaaccgcatggagctcctcaaccatcctgtttgc
aaaaagtatctggccatgaagtgggttgcttatgggagcacagctcacatgctcaacatg
tttttgtacatgctggggctgctgcccttaactcacctgatagtgactctaagaccatct
atgaacatgactgaaacgggcgagcacaatatcaccatggtacccatatctttcatggag
caaagtctcttcttgtccatctgcatcgtgatggttttgaccatcaacatctactcaata
ggaaaggaattggtgcagatatcacagcagcgctggatgtacttcacggatttttccaac
cagtttgactgggtctcagccatctgctctctactgttcatcatccccatcatgctcaat
gcagagggctctttacactggcaagctggggcactggcagttataaactcctggtttgga
tttctcctttatctccagaggtttgagggtgtgggcatctatgttgtgatgtttggggag
atcatgaagacactgtttcgggttataatgctgttcgtatacatgatgttggctttcagt
ttggcgttccatgccctgatgctcaaccagaaagagtttgacaccgtgccgctctcagtg
gtacaaacctttgtgatgatggttggggaactgaactaccagaacaacttcctggaggct
tatctgaagaatgagctccctttcagtgccctgacatacttcatctttgtgcagtttgtt
cttcttatgccaatcctgctggtgaacctgatgattggtttggcagttggagatattgct
gaagttcaaagaaatgctgccctaaaacggatagccatgcagattgacctccacaccgct
ctggaagacaagctcccctactggtttatgaaacgagtcgacaaaccctccatcaccgtc
taccccaatcgcaagtgctcgcagttcctcctaaggacattaatagtaggtgaggaggaa
acaaatgaaatgcggagtcatctgcaggccagatcacagagctcctcttggatagagaat
gagctgaaaaagcagaagtacagaatgaaggagatgtcaagcatgctggagaagcagcac
ggtctcttgaagctcatcatccagaagatggagatcacctctgaggccgacgagtacgac
ggccctgtgaatgtcagaggcagcgtgtggcccaacctgagtcagactaaaccaagagga
cacagtaggtcccgatgggtcccgctgatgaaggccatcgagtccaagaaaaaatga
DBGET
integrated database retrieval system
