Embiotoca jacksoni (black perch): 138199273
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Entry
138199273 CDS
T10523
Symbol
trdmt1
Name
(RefSeq) tRNA (cytosine(38)-C(5))-methyltransferase isoform X1
KO
K15336
tRNA (cytosine38-C5)-methyltransferase [EC:
2.1.1.204
]
Organism
eja Embiotoca jacksoni (black perch)
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eja03016
]
138199273 (trdmt1)
Enzymes [BR:
eja01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.204 tRNA (cytosine38-C5)-methyltransferase
138199273 (trdmt1)
Transfer RNA biogenesis [BR:
eja03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
138199273 (trdmt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-GeneID:
138199273
NCBI-ProteinID:
XP_069007316
LinkDB
All DBs
Position
Unknown
AA seq
449 aa
AA seq
DB search
MLMRAARWSVPGSLPQFAGSLARFSSPSGGCRGRLYSGAHTEPITGLRSVAPPCDICLKT
PRASPRVLSSARREVRRRKGSSHLSHLSESGVPAQVVAAVDINTTANLVYRHNFPDTVLW
NKTIEGVSIDDFNALSFDMILMSPPCQPFTRIGLQGDLSDPRTKSFLYILHLLPRLSRRP
RFILLENVKGFESSSARERLVETLKECGYTFQEIMVSPISVGIPNSRLRYFLIAKISTEN
FTSSKILEAFPHPADGDSHEQPTVLSLTCSGAGQPEEQMQGGHVLYKLETTTDAQRKKNQ
NDDLSVGQIQDFLERPMEGNMECYLLPPKTLLRYGLLLDIVQPTCRRSVCFTKGYGRYVE
GTGSVLQCCMETKMESVFSGLDRCSEEEKLQRLLKLKLRYFTPREVANLMGFPQTFSFPE
QTSTIQRYRVLGNSVNVVVVARLLQLLVS
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgagagctgcccggtggtccgtccccggttccctgccccagttcgccggttct
ttggcccggttcagctcaccctccggcggctgtcggggaaggttgtattcaggagcacac
accgagcccatcaccggcctccggtctgtggcacctccatgtgatatctgtctgaaaact
cctcgtgcctctccgcgagtccttagctccgcccggcgggaggtgaggaggaggaaaggg
agttcacacctgtcacacctgtcagagagcggcgttcctgctcaggtggtggcggccgtc
gacatcaacaccaccgccaacctcgtctaccggcacaacttccccgacaccgtcctctgg
aacaagaccatcgagggcgtatcgatcgatgacttcaatgcgttatcttttgatatgatc
ttgatgagcccgccctgccagccgttcaccaggatcgggctgcagggcgacctgtctgac
cccagaaccaagagcttcctctacatcctccatcttctgcccaggctgagcaggcggccg
cgcttcatcctgctggagaacgtgaaaggcttcgagagctcctcggccagggaacgtctg
gtggaaacgctgaaggaatgtggatacacttttcaggagatcatggtctcacccataagt
gttgggatcccaaattcaagactgcgttatttcctgattgcgaagatttcaacagaaaac
ttcacaagttcaaagattttagaggccttcccacatcctgctgacggtgactcccacgag
cagcccacagtcttaagtcttacctgctcaggtgccggccagccagaagagcaaatgcag
ggcggccatgttctgtacaaactggagacgacaacagatgcccagaggaagaagaaccag
aacgacgatctgtccgtcgggcagattcaggacttcttggaacgaccgatggaaggaaac
atggagtgctacctccttcctcctaaaacgctgctgcgatacggcctcctgttggacatt
gttcagcccacatgcaggagatcggtctgcttcaccaaaggctatgggcggtatgtggaa
ggaactggatcagtactgcagtgctgcatggagactaagatggagagcgtgttctcgggt
ctggaccggtgctccgaggaggaaaagctccagcgactgttaaagttgaagctgcggtat
ttcactcccagagaagtcgccaacctcatgggcttcccccaaaccttctccttccctgaa
cagacgtcgaccattcagcggtacagagttttagggaacagtgtgaatgtggtggtggtg
gcccgactgctgcagctgctggtctcctag
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