Embiotoca jacksoni (black perch): 138199478
Help
Entry
138199478 CDS
T10523
Symbol
shrprbck1r
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1
KO
K10630
RanBP-type and C3HC4-type zinc finger-containing protein 1 [EC:
2.3.2.31
]
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja04217
Necroptosis
eja04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
138199478 (shrprbck1r)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
138199478 (shrprbck1r)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
eja04121
]
138199478 (shrprbck1r)
Enzymes [BR:
eja01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
138199478 (shrprbck1r)
Ubiquitin system [BR:
eja04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
138199478 (shrprbck1r)
Multi subunit type E3
LUBAC complex
138199478 (shrprbck1r)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sharpin_PH
Zn_ribbon_RanBP
zf-RING_2
zf-RING_5
IBR_1
Motif
Other DBs
NCBI-GeneID:
138199478
NCBI-ProteinID:
XP_069007691
LinkDB
All DBs
Position
Unknown
AA seq
717 aa
AA seq
DB search
MSLSSGGSWTQTPGHSSDQSAAAAAALLLPSHYGASESLLSCQTVLMSVRVSVCHSGIRP
LCLPGAGDESLRLQLSMDQGKSGEFRLSLQDSSSGAGRSVTIAEFDLRNVNYEVKSPKCH
EISLVAPPHDRISFNFRCEQEAQEWATVLMSSLREAHRVAPQDNGAQHPLDGLPPQNTKA
LQQTEETCIELTRAIEAGDMQLASVLASTLARQHTVLKIQPSPRDFEDTEINLAVVVEDS
SSSCCVTVKVFPHMNTASLKQQMFLEYGFHPRVQRWVIGQCLCTDQRSLASYGVRQDGDT
AFLYLLSARHARLTLRVLQQDQESALLLTPSPLSFQNPPLSSTSANGSCEDRRPYTTLPP
RLHASSNVGGSERQNANEIRDLINLEMPQLNEALSPKTSSTQGWSCTSCTYINKPTRPGC
EICSTNRPENYVIPGGYRPDALELRRIQQEKDAIRQYQQAKEEERRENFARLVMMDGQDL
VPNPEPVECRICYVDLQPGEGVLLRECLHCFCKECLRSVIMLSEEPEVSCPYRDDAYSCA
RSLQEREIRALVPAEEYERWLQRGLSVAESRCEGSYHCATPDCLGWCVYEDTVNVFHCPV
CKKHNCLICKSIHEGMNCKQYQDDLAARAINDSAARRTTYLLKTLVQSGEAMHCPQCGII
VQKRDGCDWLRCTVCHTEICWVTRGPRWGPKGPGDTSGGCRCNVNNQKCHPKCQNCH
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgagttcaggcggcagttggactcaaacgcccggccactcatcggaccagtcc
gccgccgccgccgccgccctcctcctccccagccactatggggcctcggagtctctactt
agctgtcaaaccgtcctcatgtcggttcgggtgtccgtgtgccattctggtattcggccg
ctgtgtcttcctggagccggcgatgagtcactccgcctgcagctcagcatggaccagggg
aaatccggggaattccggctgtcgctccaggacagcagcagcggggccggcaggagtgtg
accatcgctgagtttgatttgaggaacgtaaactacgaggtgaagtcaccaaagtgccac
gagattagtctggtggctcccccacatgatcgcatcagcttcaactttcgctgtgagcag
gaggcccaggagtgggccactgtcctgatgtcgtcattgagagaagcacacagagtcgcc
cctcaggataacggcgctcagcacccgctcgacggtcttcctcctcagaacaccaaggct
ttgcaacaaacagaggaaacttgcatcgagctgaccagagccatcgaggcaggtgacatg
cagttggcttcggtccttgcttccacgctggcccgtcaacatacagtgctgaagatccag
ccctctcccagagactttgaagacactgaaatcaatttggctgttgttgtggaggattcg
tcctcctcctgttgtgtcactgtgaaagttttcccacacatgaacactgcatcactgaaa
cagcagatgttccttgaatacggctttcacccacgggtgcagcgctgggtgattggccag
tgcttgtgcaccgaccagcggtctctcgcctcgtacggtgttcgtcaggatggcgacacg
gccttcttgtacctgttgtcggcccgccacgctcgcttgaccctccgagtcctccagcag
gatcaggagagtgccctcctcctcactccttcacctctgtcttttcaaaaccctcctctc
tcttctacctctgcaaatggctcgtgtgaggaccggaggccgtacaccacccttcctccg
agactccatgccagcagcaacgttggtgggtcagagaggcaaaatgccaatgaaatcaga
gatctcatcaacttagagatgccccaactcaatgaagcactgagtcccaaaacaagctcc
acccagggttggtcgtgcacctcttgcacctacatcaataaaccgacccggccgggctgc
gagatctgcagcacaaaccgccccgagaactacgttatcccagggggataccgacctgat
gcactggagctcagacgaatccagcaggagaaggacgctatcagacagtaccagcaggca
aaggaagaagagcgaagggagaactttgcccggctggtgatgatggatggtcaggacctg
gtgccgaaccctgagcctgtggaatgtaggatctgctacgtggaccttcaaccaggagaa
ggtgtgctgctgagggagtgtctccactgtttctgcaaagagtgcttacgctcagtcatc
atgctgagcgaggagcccgaggtgtcctgtccctacagagatgacgcatactcatgtgcc
cgctccctgcaggagagggagatcagagctctggtgccagcggaggagtatgagcgctgg
ctacagagaggtctttcagtggcagagtctcgctgtgagggcagctatcactgtgcaact
ccagattgtctgggctggtgtgtgtatgaggacactgtcaatgtcttccactgtcctgtc
tgcaagaaacacaactgcctgatttgcaagtcaatccatgagggaatgaactgtaagcaa
taccaggatgatcttgcagcccgagctataaatgactctgccgccaggaggacaacatat
ctactaaagactcttgtgcagtcaggggaggccatgcactgtccccagtgtggtatcatt
gtgcagaagagggatggctgtgattggctgcgctgcactgtctgtcacactgagatctgc
tgggtaaccagagggccccgttgggggccaaagggtcctggagacaccagcggaggatgt
cgttgtaatgtcaacaatcagaaatgtcatcccaaatgccaaaactgccactga
DBGET
integrated database retrieval system
