KEGG   Embiotoca jacksoni (black perch): 138200157
Entry
138200157         CDS       T10523                                 
Symbol
hltf
Name
(RefSeq) helicase-like transcription factor isoform X1
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
eja  Embiotoca jacksoni (black perch)
Brite
KEGG Orthology (KO) [BR:eja00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:eja04121]
    138200157 (hltf)
   03400 DNA repair and recombination proteins [BR:eja03400]
    138200157 (hltf)
Enzymes [BR:eja01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     138200157 (hltf)
Ubiquitin system [BR:eja04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    138200157 (hltf)
DNA repair and recombination proteins [BR:eja03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    138200157 (hltf)
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4_3 zf-RING_UBOX zf-C3HC4_2 zf-C3HC4 zf-RING_2 DEAD ResIII zf-RING_5 RING_XB3-XBAT31 zf-ANAPC11 zf-C3HC4_4 DUF5817 zf-Nse Prok-RING_4 zf-rbx1 zf-RING_4 HDA2-3 HypA
Other DBs
NCBI-GeneID: 138200157
NCBI-ProteinID: XP_069008745
LinkDB
Position
Unknown
AA seq 966 aa
MFSRRWRFGLERDNEVDLFSDRHETNAETLSQAIRAAASEEPDADGSVLFGHLQGTVVGL
RYYTGVVNQGEMVGLVRQPQNPYDRNAVMVANIYGNQVGHIKKELAAAMAYVMDNNLAKV
EGVVHSRTRNSFTMPLMLSFWGKEESKNAVIENMSRRGYKLNTGAGIKLTGGYQNSYSQG
ASASQSKKGLTIPLTAEELKNAFDNLFEGLMESKDGEKEAAESVGTPLLLHQKQALSWMC
ARENKSALPPFWEKRGELYYNSLTCFSAKEIPDRVRGGILADDMGLGKTLTTIALILTNF
HKGKPLPVEKCEEWSSPTKAKTKPQMASKLDGGSGAGDRDAAGGSLRSDRSQVEVICVDT
PDVVEIADQPEKSTSKGKMKPTKRKPSKDAPVFLEDLDFAAALCGSTSDTDSKKKIAKKA
DLTHSVESSITENTGDSSARTTLIICPLSVISNWLDQFEQHVHANVKLNVYLYYGAERNR
SKKFLSSQDVVITTYNVLSTDFGNKSPLHGIDWLRVVLDEGHIIRNPNAQMSKAVLDLKA
QRRWILSGTPIQNSVKDMWMLLAFLRLKPFDVKEWWNRVIQRPVTQGDRTGLQNLQTLVK
CITLRRTKSSEVNGRPVVSLPEKTVSVEQVELSQPEREEYELARAEGRNIIGRYVSEGTV
LRNYADVLVILMRLRQHCCHPDLMAKMSSDLGAAATPAELRERLIEKLRLVLASGSDEEC
SVCLESVQLPVITHCAHVYCRPCIAQVISTEQTRARCPQCRSEIKTSELVEFPQEEMEEE
KSENSERWRTSSKVQALMGNLLRLRYEDRSIKCLVVSQFTRFLTILETPLREHGFSFVRL
DGTINQKKRTQVIQEFQSSAAGGPAIMLLSLKAGGVGLNLSAASHVFLMDPAWNPATEEQ
CIDRCHRLGQKRKVVVTKFIVKDSVEENMVKIQRQKRDLVEKAFGSKTAERKTSHVDDVR
ALMELF
NT seq 2901 nt   +upstreamnt  +downstreamnt
atgttttcccgcaggtggaggttcggtttggagagggacaacgaggtggacctcttctca
gaccgccatgagactaatgcagagactctttcccaggccatccgagccgcagcgtccgag
gagccggacgcggacggcagcgtgttgtttggccatctgcagggaactgtggtcggcctc
agatattataccggggtggtgaaccaaggggagatggtcggattagtgcggcagccccag
aatccatacgaccgcaacgcagtgatggttgccaacatttatggcaaccaggtaggacac
atcaagaaggagctggcagcagctatggcctacgtcatggacaacaacttggctaaagta
gagggggtggtgcactcacggacgagaaactcattcaccatgccactgatgctctccttc
tgggggaaagaagagagcaaaaatgctgtgattgaaaacatgtcacgtcgcggatacaaa
ctcaacacaggtgctggaatcaaactaacaggtggatatcaaaactcatatagtcaaggt
gcttctgcatctcaatccaaaaaaggtttgaccatcccactgactgcagaggagctaaag
aacgcttttgataacctgtttgaagggttgatggagagtaaagatggggagaaagaagca
gctgagtctgtcggtacacctctcctgctgcaccagaagcaggcgctgtcctggatgtgt
gctcgagaaaacaaatctgctctgccaccgttctgggagaagagaggcgagctgtactat
aacagcctcacttgtttctctgccaaagaaataccagacagggttcgtgggggaatcctg
gcagatgacatgggactgggtaaaacccttacaacaatcgctctgatcctcaccaacttt
cacaaaggaaagccgctgcctgtggagaaatgtgaggagtggtcttcacctaccaaagct
aaaactaaaccacagatggcctccaaacttgacggaggcagcggtgcaggtgatagagat
gcagcaggtggatctctacggtcagaccgttcccaggtggaggtgatctgtgttgatacc
ccagatgtagtggagatagcagatcagccagaaaaaagtacgagcaaagggaagatgaaa
cccaccaagcgaaagcccagtaaagacgccccggtgtttctggaggatctggactttgct
gcagcgctgtgtggctcaacatcagacacagactcgaagaagaaaatcgccaagaaggcc
gatctcacacatagtgtggaatcctccatcactgaaaacacaggcgactcatcagctaga
acaactctcatcatctgcccgctgtccgtgatcagcaactggctggaccagtttgagcag
catgtgcatgctaatgtgaagctaaacgtgtatctgtattacggtgcagagcgcaacagg
agcaagaagtttctgtcctctcaagatgtggtgatcaccacatacaacgtcctctctacc
gacttcgggaataagagtccccttcatgggatcgactggctgagggtcgtgctggatgaa
ggacacatcataagaaaccccaacgcacagatgagtaaggccgtgctcgacctgaaagct
cagaggcgttggattctttcaggcactcccatccagaacagtgtgaaggacatgtggatg
ctgctggcctttctgcgtctgaagcccttcgatgtgaaagagtggtggaacagagtgatc
cagagacctgttacacaaggagacagaacaggcctgcaaaacctgcaaaccctggtgaag
tgcatcaccctgaggaggaccaagagcagcgaggtgaatggacgtcccgtggtgtccctg
cctgagaagaccgtgtccgtggagcaggtcgagctcagccagccagagagggaggagtat
gagctggcacgagcagaaggaagaaacatcatcggcagatacgtgtctgaaggaacagtc
ttgaggaattatgccgacgtgctggtcatcctgatgaggctccgacagcactgctgccac
cccgacctgatggcaaagatgtcctcagatttaggtgccgcggcaacgccggcggagctg
cgggagcgcctgatcgagaagctgcggttggttctggccagcggctctgacgaggaatgt
tctgtgtgtctggagtcggtccagctgcccgtcatcacgcactgcgcccacgtttactgc
cggccctgcatcgcccaagtcatcagcactgagcagaccagggcacgctgtccgcagtgt
cgaagcgagatcaagaccagtgaactggtggagtttccgcaggaggaaatggaagaagag
aaaagtgaaaactcggagaggtggaggacgagctcgaaggtgcaggcgctgatgggaaac
ctgctgaggctgcgatatgaagacagaagcattaaatgtttggtggtctctcagtttact
cgcttcctcaccatcctggagactccactcagagaacacggtttcagttttgtgcggctg
gacggcaccataaaccaaaagaagaggacccaagtcatccaggagtttcagagctcggca
gccggcggccccgccatcatgcttctgtcactcaaagctggaggggtggggcttaacttg
agcgccgcttctcacgtttttctcatggaccctgcgtggaacccagcgactgaggagcag
tgtattgaccgctgccaccgtttgggccagaagagaaaagttgttgtcaccaagttcatc
gtgaaggactcggtggaggagaacatggtgaagatccagaggcagaagcgggacctggtg
gagaaagcgttcggttccaaaaccgccgagaggaaaacatctcacgttgatgacgtccga
gccctgatggagctgttttag

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