Embiotoca jacksoni (black perch): 138200306
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Entry
138200306 CDS
T10523
Symbol
nfasca
Name
(RefSeq) neurofascin homolog (chicken) a isoform X1
KO
K06757
neurofascin
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja04514
Cell adhesion molecule (CAM) interaction
eja04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
138200306 (nfasca)
04517 IgSF CAM signaling
138200306 (nfasca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
eja04515
]
138200306 (nfasca)
Cell adhesion molecules [BR:
eja04515
]
Immunoglobulin superfamily
L1 family
138200306 (nfasca)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
Bravo_FIGEY
V-set
Ig_VEGFR-1-like_5th
FN3_DSCAM-DSCAML_C
Ig_5
C2-set_2
Ig_4
Ig_PDGFR_d4
BiPBP_C
Fn3_ROS1
MUC7
Motif
Other DBs
NCBI-GeneID:
138200306
NCBI-ProteinID:
XP_069008976
LinkDB
All DBs
Position
Unknown
AA seq
1385 aa
AA seq
DB search
MLRQGGHAALTLTLLLLLWREATPIEVPQDPKILQDLKQPPTIIKQSVKDYIVDPRDNII
IECEAKGNPVPTFSWRRNGKFFNIGKDPRVTMRKRSGTLEIGFRSGGRPEDYEGEYQCYA
TNEFGIALSNWILLRVSKAPLWPKEVLEPVMVTEGSPLVLPCNPPPGLPPPFTFWMNSSM
SPIPLDKRVSMGLNGDLYFSNVLSQDAQTDYSCNARFTHTIQQKNPFTLRVQTKEQYNDT
SFNASDPLGGRKVAETTPTFLSPTGRESSKMVLRDEQLLLECIAAGLPTPTIKWFKKGGD
LPGRKVKFEKYNKTLKIINVSEEDAGEYVCMANNHLGSIRHSIFVQVKAAPYWLDRPTDL
VLAPDENGRLVCRANGNPKPNIQWLVNGQPIETAPPYPNRLILEDTIIFRLVQMGSSAVY
QCNASNQHGYLLANAFVSVLDMPPRMLGPKNQLIKVVENNRTFLECPFFGSPLPDLRWFK
NGQGSGLDGGHYRVYINGSLEIKRARAEDEGTYTCVASSILGKAENQVRLEVKEMMRIVR
APIDVSAIRGTTVQLDCKVKSDPSLPVTVTWTKDDKPLYLGWRLKKDGESLTINNVNEGD
EGTYTCSAKSEIDHDSASGRLTVLEEASLYPTVSSALPPDRPDPPMELDLSDPAARSIRL
TWIPGNDNRSPIKEFLVQFQEDRWEPGRWQDLSSYPGDLNSVILQLAPFVNYQFRVIAVN
SVGPSKPSQPSPWYKTSGAAPDAIPRGLRGWGSKKDNMEISWEPLLDLERNGPNLHYSVW
WRRKDLGEDWSNVTSVGSKHIIQNTETYVPYEIKIQARNDFGSGPESNVVTGFSGEDKPT
EAPKDLRVSKVDSTKANIHWKPVDLNSVLGEFKEYRLYFWRESSKVPGLVVSKEKKTKGF
FSTTADPSGLLSDLVPFSRYQMFMVAANSRYEGPPSNTVEFSTREGVPDAPKLFRINRRS
LDSLYLEWDKPLEPNGVLIGYQLKYRTVNGSRHGRLQLESFFPNVTEFSLRLPDRSTRYR
FYLAALTQVGSGEVVMEESPHSANEDNVTDATGLVDLTDASVSSALTPTAPPLAPLPPTT
VAPTTVSTSAPTTPPTTAPPTTPPPTTTPPPTTTTTTTEATTTSTPPPPASTRRSDQNVF
VAPRLEIWNLTVEPNSNYANVSWRHTFPPGSSEFVLEFTLDSDKTVKVVSVKQQPPITVA
DLIAGADYHLRVYSHELNSISSKTIPFQTKAAYMDQVDIATQGWFIGLMCAIALIILILL
IVCFIKRSRGGKYPGGGYLAAFTECLVRDKKDLPLDPVDQKDQDGSFDYHSDEDNKPLQG
SQTSLDGNVKESDDSLVDYGEGGDGQFNEDGSFIGQYTVKKDKDETEGNESSEATSPVNA
IYSLA
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atgttgaggcagggcgggcatgcggccctgactctcacattactgctgcttctgtggcgc
gaggcgacgcccatcgaagtcccacaagacccaaagatcctgcaggacctgaagcagccc
cccaccatcatcaaacagtcagtgaaagactacatcgtggacccccgagacaacatcatc
atcgagtgtgaggccaagggcaacccggtgccaacgttctcatggagacggaacgggaag
ttcttcaacatcgggaaggatcctcgcgtcaccatgaggaaacgctcaggaacgctggag
atcggcttccgcagcggaggacggcccgaagactacgagggagaataccagtgttacgca
accaacgagttcgggatcgctctgtccaactggatcctgctgagggtctccaaggcccct
ctgtggcctaaagaggttctggagccggtgatggtgactgaaggttccccactggttctc
ccctgcaaccccccaccgggcctccctccccccttcaccttctggatgaacagcagtatg
agtcccattcccctggataagagagtgtccatgggtttgaacggagacctgtacttctcc
aacgtcctctctcaggacgctcagacagactatagctgcaacgctcgcttcacacacacc
atccagcagaagaaccctttcacactccgagtgcagaccaaggagcagtataatgacaca
tcattcaatgcctctgacccgttgggtggtcggaaagtagccgagaccacgcctaccttc
ctctctccgacaggaagggagagctccaagatggtgctgcgagacgagcagctgctgctg
gagtgtatcgctgctggactgccgacgcccaccatcaagtggtttaagaagggcggcgac
ctgccgggacgcaaggtgaagtttgagaaatacaacaagaccctgaagatcatcaacgta
tcggaggaggacgccggagagtacgtctgcatggccaacaaccacctgggcagcatacgc
cactccatcttcgttcaggtcaaagcggctccctactggctggacagacctacggacctg
gtgctggccccagacgagaatggacgcctggtgtgtcgcgccaacggaaaccccaaaccc
aacattcagtggctggtcaacgggcagccaatagaaaccgcccccccctacccgaaccgt
ctgattctggaggacaccatcatcttccgcctggtgcagatggggagcagcgcggtgtac
cagtgcaacgcctccaaccagcacggctacctgctggccaacgccttcgtcagcgtcctg
gacatgcctccgaggatgctaggccctaaaaaccagctgatcaaagtggtggagaacaac
cggaccttcctggagtgtccgttcttcggttctcctctgccggacctgcgctggtttaag
aacggacagggcagtgggctggatggagggcactaccgggtctacatcaacggctccctg
gagataaaacgggcccgagctgaggacgagggaacctacacctgtgtggccagtagcatc
ctgggcaaggccgagaaccaggtccgcctggaggtcaaagagatgatgcgtatcgtccga
gcccccatagacgtgtcagccatcagaggaaccacggtccagttggactgcaaggtgaag
tctgatcccagcctccctgtcacggtgacctggaccaaggacgacaagcctctgtacctg
ggatggaggctgaagaaggacggggagtctctgaccatcaacaacgtcaacgagggcgac
gagggaacgtacacctgcagcgccaaatctgagatcgaccacgactcagcatcgggccgc
ctcactgtgttagaggaagcctccctctaccccacagtctctagtgccttgcctccagac
cgtcctgacccacccatggagctggatctgtcggaccctgcagcccgcagcattcgcctc
acctggatccctggaaacgacaacaggagccccatcaaagagtttctggtccagttccag
gaggaccgctgggagccgggccggtggcaggacctgtcctcctaccctggagacctgaac
tctgtgatcctgcagctcgcccccttcgtcaactaccagttcagagtcatcgccgtcaac
tcggtgggaccgagcaagccgagccagccatcgccctggtacaagaccagcggagctgct
ccagatgccatccccagaggacttcgagggtgggggtccaaaaaggacaacatggagatc
agctgggagcctcttctggacctggagagaaatggaccgaacctgcactacagcgtgtgg
tggagacggaaggacttgggggaggactggagcaacgtgacctcggtcgggtccaaacac
atcatccagaacacagaaacctacgtgccttatgagatcaaaatccaggccaggaacgat
tttggatcaggaccagagtccaacgtggtcaccgggttctccggagaggacaaacccacc
gaggctcccaaggacctgcgggtgtccaaggtggacagcaccaaggccaacatccactgg
aagcccgtggacctgaattctgttctgggagagttcaaggagtacagactgtacttctgg
cgtgagtccagtaaggttccaggtctggtggtcagtaaggagaagaagaccaaaggtttc
ttcagcaccacggccgacccgtcgggcctcctcagcgacctggttccattctccaggtac
cagatgttcatggtggcggccaacagccgctacgagggtccgcccagcaacacggtggag
ttcagcaccagggagggagttcctgatgcccccaaattgttcaggattaaccggaggagt
ctggactccctctacctggagtgggacaaacctctggagcctaacggcgttctgattgga
taccagctgaagtatcgcacagtcaatggttccaggcacggccgtctccagctggagtcg
ttctttcccaacgtgacggagttcagcctccgcctgccggaccggtccacccgctacagg
ttctacctggcggcgctgacccaggtgggatcgggggaggtggtcatggaggaatctcct
cactctgccaatgaggataacgttaccgatgctacaggtctagttgatcttaccgacgcc
tctgtgtcttcagctctcacccctactgctcctcctctcgctcctcttcctcccaccacc
gtcgccccgacaaccgttagtacctcagctccgaccactcctccaacgaccgctcctcca
accacgccccctccgactacgactcctcctcctacgaccaccaccacgaccacggaggcg
accacgacctctacccctcccccgccggcctccaccaggcgtagcgatcagaacgtgttt
gtggcccctcggctggagatctggaatctgacggtggagcctaacagtaactacgctaac
gtcagctggagacacaccttcccgcctggcagcagcgagtttgtgctagagttcacactg
gacagcgacaagacggtgaaagttgtgtcggtgaaacagcagcccccgatcactgtggcg
gatctgatcgccggggccgactaccacctgagagtttactcccacgagctcaacagcatc
agcagcaaaactatcccctttcagaccaaagcagcctacatggaccaggtagacatcgcc
actcagggctggttcatcggtttaatgtgtgccatcgcactcatcatcctcatcctcctc
atcgtgtgcttcatcaagaggagtcgggggggtaaatatccaggtggaggttacctggcc
gctttcacagaatgtctcgtccgggacaaaaaggatctgcccctggacccggtggaccag
aaagaccaggatggatcctttgattaccacagcgatgaggacaacaagcctctgcagggc
agccagacgtctctggacgggaacgtgaaggagagcgacgacagcctggtggactatggc
gagggcggcgacggccagttcaacgaggacggctccttcatcggccagtacacagtgaag
aaggacaaggacgagacggagggcaacgagagctccgaggccacctcacccgtcaacgcc
atctactcgctggcgtag
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