Embiotoca jacksoni (black perch): 138200533
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Entry
138200533 CDS
T10523
Symbol
lsm4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja03018
RNA degradation
eja03040
Spliceosome
Brite
Messenger RNA biogenesis [BR:
eja03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
138200533 (lsm4)
mRNA degradation factors
5'-3' decay
Lsm complex
138200533 (lsm4)
Spliceosome [BR:
eja03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
138200533 (lsm4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
138200533
NCBI-ProteinID:
XP_069009411
LinkDB
All DBs
Position
Unknown
AA seq
153 aa
AA seq
DB search
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVVSKGRGRGGAQQNKQQGKGRGGVGRGLFGGRGRGMTG
PGRGQQQQQQQQQQQQQQPDKKQGKPQGMKNQH
NT seq
462 nt
NT seq
+upstream
nt +downstream
nt
atgcttcccctgtctctgctgaagactgcccagaaccatcccatgctggtggagctgaag
aacggagagacctacaacggtcacctggtcagctgtgacaactggatgaacatcaacctg
agagaagtcatctgcacctccagggatggagataagttctggaggatgcctgagtgctac
atccgaggaagcaccatcaagtacctgcgaatccctgatgagatcatcgacatggtgaag
gaggaggtggtgtcgaagggccgcggccgtggaggcgcccagcagaacaaacagcagggc
aaaggaagaggaggagtcggccgaggtttgtttggcggccggggtcgagggatgaccggc
cctggtcggggtcagcagcagcagcagcagcaacagcagcaacagcagcagcagccagat
aagaaacaaggcaaaccacagggaatgaagaaccagcactga
DBGET
integrated database retrieval system
