Embiotoca jacksoni (black perch): 138200556
Help
Entry
138200556 CDS
T10523
Symbol
abca7
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja02010
ABC transporters
eja04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
138200556 (abca7)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
138200556 (abca7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
eja02000
]
138200556 (abca7)
Transporters [BR:
eja02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
138200556 (abca7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DrrA1-3_C
AAA_23
Motif
Other DBs
NCBI-GeneID:
138200556
NCBI-ProteinID:
XP_069009438
LinkDB
All DBs
Position
Unknown
AA seq
2386 aa
AA seq
DB search
MGFFRQLYLLLWKNITYRRRNKIQLIIELLWPLFLFVILISVRHSHPPYKQSQCHFPNKA
LPSAGTLPWIQGIICNINNPCFHSPTPGETPGQAGNFDNSILSRFFVDAQTVLSYSGNQS
FSGFQDLMGSVRKLGERQGAWPNLPVSECLRANETFSTFLLTNGSLSPASMDQLLKARLN
LQPLVTGLQMQPKDLVCNASLLGQLLIVDGGEAAMTDLQTELCDAPADVLQEVERLFLTQ
LDLTKFLTRDSLMANAGVLRLISQAVTSLARELAGLMDDLSSLSSFAEMSAALRLLSPEN
STAVPRESFRAFSRVMCGHPEIGGERIPSLNWYEDNDIKSFLGKNGTEDVDLDRDNNTTP
FCKSLIHGLESNPLSRIVWRGIKPLFIGKLLYTPDTPAVQQVMKEVNKTFEDLQILQELN
EAWMEVGPRIKNYMESSVEIQLLQDLLRRPEIAVLVNLQLGNTPWTASRIARFLSTPSPN
TPRNPGAPHTWLDVYNDFSHTITTLAEITECFSLNKLEGLESEGQLIDRALELLEDRQFW
AGVVFLLPNTSSPELPPHVTYKIRMDIDDVTRTNKMKDRFWDPGPAADPFSDMRYIWGGF
VYVQDLVERAVSRVLTGVQQTTGIYIQQMPYPCYVDDVFLRVLNRSLPLFMTLAWIYSVA
MIIKGVVYEKEARLKETMRIMGLGTGTLWLSWFISSLVPFLFSAVLLIALLKWGDILPYS
NPAVVFFFLVAFATSTIMQCFLISTFFSKANLAAACGGLIYFGLYLPYVLCVAWRDRLNT
TIRVFASFLSPVAFGFGCEYFSQYEEQGVGIQWTNLQSSPVEGDSYSFSTSIIMLYVDAF
IYAIAAWYIEAVFPGEYGIPRPWHFIFQSNYWGGVPLEVGMPIPPAPREEAEDHIEPEPT
NVPLGVSIRNLVKIYKKGAKLAVNHLNMKFYEGQITSFLGHNGAGKTTTISVLTGLFPPT
SGTVYIKGMDIRNDMDIIRRTLGVCPQHNVLFDILTVEEHVWFYGSLKGLSGEEVRAELD
TLLEDVGLLHKRHEQTKNLSGGMQRKLSVAIAFVGGSKVVVLDEPTAGVDPYSRRGIWDL
LLKYRKDRTIILSTHYMDEAELLGDRIAIISQGRLCCCGSPLFLKSRLGSGYYLTVVKRE
GLDIHTPSGYSICTSTSTSTNKLPPFPKDSESSLSEDTGLGSEESNSYLAALLSLVQHHI
PGARLVEESRREAVINLPQTAAKDSSLGVFLNALDQRLAELGISSYGLSDSTLEEIFLRV
AEETGVDAEPELQAEPPNNQPQPSGQRAEGQPAEEPETGGKRLRKQEPQETDLLSGDGRG
GVPLTGWWLTWQQLRALFIKRWLYARRSRRGFFAQIVLPAVFVLVALLFSLIVPPFGKYP
NLQLQPWMYGEQYTFFSNDAPGSPAMENLLEALLDRPGFGTKCMEKEEEDNSKSPQCEAE
RSGLFTRPQLSYATWQMFNRGNWSKDRPSPDCQCSTEKVRRMLPDCPQGAGGIPPPQMKR
VTGDILQNLTSYNISDYLVKTYSQILKKSLKTKKWVNEFRYGGFSLGGSATQTVSQVHHL
QDSVMAIRTRYRVPQNSSLDHLLNRLPEFVGGLNSQNNVKVWYNNKGWHAMVSFVNVMNN
GLLRASLPPGPERRRHGITAYNHPINLTKEQLTEMAMMTTSVDVLVSICVIFAMSFVPAS
FILFLIEERVSKAKHLQFVSGVKPILYWLANFLWDMLNYTVPATMVVLIFISFQQQSYVS
ETNLPALVLLLLLYGWSITPLMYPASFLFSVPSTAYVVLTSINLFIGINGSVATFVLELF
VDEHLNEVNRILKKVFLIFPHFCLGRGLIDMAKNQAMADAFQRLGTKQTLDPLQWDFVGK
NLFAMAAEGVIFFIFTILLQYKFFIRFRPWWTNPVMPPLGPEDEDVARERERVKRGRAQF
DILTMFDLSKVYKSGRKPAVDRLCLGIPRGECFGLLGVNGAGKTSTFRMLTGDTPITHGK
AFLSNHSVLTDMEQVHQLMGYCPQFDAISDLLTGREHLELYARLRGVPEVSVTKVAQWGV
KRLGLTQYAEQEAGGYSGGNKRKLSTAISLIGAPPVIFLDEPTTGMDPKAKRFLWNCILS
VTKEGRAVVLTSHSMEECEALCTRMAIMVNGRFQCLGSVQHLKNRFGDGYTIILRLGDTK
SDPDSSLVSTYMQKSFPSIELKEQHQNVLQYQLPSHTCSLARVFDVLANNYEELDIVDFS
VSQTTLDQVFVSFAKEQTDDDHLTDVVVSNGTVQPNPPAQINPPETIIQPQPPVKPPQPS
KAPQPPGKSSDSNPKAGKPKKAKASKGRSTAEKSSGVAMSRLSQPEEKGLESTQTSRRGS
SASSSSSSGVQRGTTQPQMSKHRAESSSKDPSALFIVGSNLQDSAL
NT seq
7161 nt
NT seq
+upstream
nt +downstream
nt
atgggttttttcagacagctctacctcctgctctggaagaacatcacataccgcagaaga
aacaagatccagctgatcatcgaactcctctggccgctcttcctcttcgtcatcctcata
tctgttcgtcattcacaccctccttacaaacagagccaatgtcactttccaaacaaagcc
ttgccttcagcaggcaccttgccctggattcagggcatcatctgcaacatcaacaacccc
tgcttccacagcccgaccccaggggagacaccgggccaagctggcaactttgacaactcc
atactatctcgtttcttcgtggacgcccagactgttctctcctacagtggaaaccagagc
ttctctggctttcaggacctaatggggagcgttcgtaagctgggagaaagacaaggagcc
tggccaaacctcccagtaagcgaatgcctgagagccaatgagacattctccaccttcctc
ctgaccaatggcagcctgtcgcctgcaagtatggaccagctgctgaaggctcgtcttaat
ttgcagcctttagtgactggactgcagatgcagccgaaggacttggtgtgcaatgcgagc
ttgctgggacaactgctgatcgtggatggaggtgaagccgccatgactgatctgcagact
gagctgtgtgacgcaccggctgacgtcctgcaggaggtcgagcgcctcttcctcactcag
ctcgacttgaccaagttcttaacgagagacagtctgatggccaacgccggcgtcctgagg
ctcatcagtcaggccgtgacctcacttgcccgggagctggctggcctcatggatgatctc
tcctccctgtccagttttgcagagatgagtgcagctcttcgtcttctgtctccagaaaat
agcacggctgtgcccagagagagcttcagagctttttcgagggtcatgtgcggtcaccct
gagatcggtggcgagcgcatcccatcgctcaactggtacgaagacaatgacatcaagtct
ttcttgggcaaaaacggcaccgaagacgtggacctggaccgcgacaacaacacgactccg
ttctgtaaaagtttgattcacggtctggagtccaaccctctgtctcgcattgtgtggcga
ggaatcaaacctctgttcatcgggaaactgctgtacacaccagacactcctgcagtacag
caagtcatgaaagaggtgaacaagacttttgaagacctgcagatcctgcaggagctgaat
gaagcgtggatggaggtgggaccacgaatcaagaactacatggagagcagtgtggaaatt
cagctgctgcaggatttgttgaggcgtcctgagattgcagtactggtcaatctgcaattg
ggaaacacaccctggaccgcctcacggatcgctcgtttcctgtccaccccgtcaccaaac
accccaagaaatcctggagcgccacatacctggctggacgtctacaacgacttcagccac
accatcactactcttgcagaaatcacagagtgtttctccctgaacaaactggaggggctg
gagtctgaaggtcagctgattgacagagctctggagctgctggaggacaggcagttctgg
gccggtgtggttttcctgctgcccaacacgtcctcacctgagctgcccccccacgtcacc
tacaagatccgaatggacattgatgatgtgacccgaaccaacaagatgaaggacaggttt
tgggatcctggtccagctgctgacccgttcagcgacatgcgctacatttggggcggcttt
gtctacgtgcaggacctggtggagagagctgtgagccgcgtgctcactggagtgcagcag
actaccggcatctacatccagcagatgccctacccctgttatgtggacgatgttttcctt
cgagtgctgaaccgctccctgccgctcttcatgactctggcctggatctactcggtggcc
atgatcatcaaaggtgtggtgtatgagaaggaggcgaggctcaaggaaaccatgaggatt
atgggtctcggaacgggaacactgtggctgagctggttcatcagcagcttggttcctttc
ctgttctccgcagtgcttctcattgccctgctcaagtggggtgacatcttgccgtacagc
aacccggctgttgtctttttctttctcgtggcatttgccaccagcacgatcatgcagtgt
ttcctcatcagcaccttcttctccaaagccaacctggctgctgcctgtggagggctcatc
tactttggcctctacctgccctacgttctatgtgtcgcctggagagaccgcctcaacact
acaatccgagtcttcgctagtttcctctctccggtggcctttggcttcggctgtgagtat
ttctctcagtatgaggagcagggtgtgggcatccagtggaccaacctgcagtccagccct
gtggagggagactcgtacagcttcagtacctccattattatgctttatgtggacgccttc
atctacgccatcgcagcttggtacatcgaagcagtgtttcctggtgagtatgggatcccc
aggccctggcacttcatctttcagagcaactactggggtggagttcctcttgaggtgggc
atgccgatcccacctgcaccgagagaggaagctgaagatcacattgaacctgaacccact
aatgtgccgctgggcgtgagcattagaaatctggtgaaaatctacaagaagggagcgaaa
ctcgccgtcaaccacctcaacatgaagttctacgagggacagatcacgtctttcctcggc
cacaacggagccggcaaaaccaccaccatatctgtcctgacgggcctgttcccacccacc
tctgggaccgtgtacatcaaggggatggacatccgcaatgacatggacatcatcagaagg
acgctgggagtttgtccgcagcacaatgtcctgtttgacatactaacagtggaggagcat
gtgtggttttatggaagtctgaagggtttgtctggagaagaggtgagggctgagctcgac
actttgctggaggacgtcggcctcctgcacaaacgacatgaacagaccaaaaacctctcc
ggtggcatgcagaggaagctttctgtggcgatagcgtttgttggaggctccaaggtggtc
gtcctggatgaacctacagctggcgttgacccctactcccgcagagggatctgggacctg
ctgctcaaataccgcaaagaccggaccatcatcttgtcaacacactacatggatgaggcg
gagttgctaggtgaccggatcgccatcatctcccaggggaggctgtgctgctgcggctca
ccactcttcctgaagtcccggctgggatccggatactacctcactgtggtgaagagggaa
ggtttggacatccacacccccagtggttatagtatctgcaccagtaccagcaccagcacc
aacaagctgcctccttttcccaaggacagtgagtcatcgctgagtgaagataccgggctg
ggaagtgaggagagcaactcatacctggcggctttgctctccctggtgcagcaccacatc
ccgggtgcaaggctggtggaggagtcgaggcgcgaggcggtgatcaacctgccgcagacg
gccgccaaggacagcagcctgggggttttcctgaatgcactggatcagagactggcggag
ctgggcatcagcagctatgggctgtcagacagcacactagaggagatctttctgcgggta
gcagaggaaactggtgtggacgctgaaccagagctgcaggctgaacctcctaacaaccag
ccgcagccttcagggcagagagctgaggggcaacctgctgaagaaccagagacaggaggg
aaaaggcttcgtaaacaagaacctcaggagacagacctgctgagtggagacggtcgaggt
ggggttcctctgaccggctggtggctgacgtggcagcagctgagagctctcttcatcaaa
cgctggctctacgctcggaggagccgcagggggttcttcgctcagattgttctgcctgct
gtgttcgtgctggtcgccctgctcttcagccttattgttcctccattcgggaagtacccc
aatctgcagttgcagccctggatgtacggagagcagtacaccttcttcagcaacgacgcc
cctgggagcccagccatggagaacctgctggaagctctgctggaccgcccaggctttggt
accaagtgcatggagaaagaggaggaggacaacagcaagagcccccagtgtgaagctgag
cggagtggcctgttcacgaggccacagttatcctacgccacctggcagatgtttaacaga
ggcaactggagcaaagacagaccttcacctgattgtcagtgcagcacagagaaggtccgc
cggatgctgcccgactgcccgcagggtgctggtgggattcctcctccgcagatgaagagg
gtgactggagacatccttcaaaatctgacaagttataacatctctgattacctggtgaag
acctactctcaaatcctcaagaaaagcctaaaaaccaagaagtgggtgaatgagttcaga
tatggaggcttctctctcggcggcagtgccacgcagactgtatcacaggttcatcatctc
caagactccgtcatggcaatcaggactcgttaccgagtcccacagaacagttcactggat
catctgctaaacagactgccagagtttgtgggaggactaaacagtcaaaacaatgtcaag
gtgtggtacaacaacaaaggttggcacgccatggtgtcttttgtcaacgtgatgaacaac
gggttgctgagagcgagcctcccgcctggtccagagaggagaagacacggcatcacggcc
tacaatcatccaatcaacctcaccaaggagcaactcactgaaatggccatgatgaccaca
tcagtagatgttctggtttccatctgtgtgatctttgccatgtccttcgtaccggccagt
ttcatcctttttctgattgaggagcgagtcagcaaagccaaacacctgcagtttgtcagc
ggggtcaaacccatcctctactggctggccaactttctctgggacatgttaaactacacc
gtcccggccaccatggtggtgctgatcttcatcagtttccagcagcagtcgtacgtctct
gagaccaacctgccggctctcgtccttctcctcctgctctacgggtggtccataacccct
ctgatgtacccagcatcctttttgttctccgtgccgagcacagcttatgtggtgctgacc
tccatcaacctcttcattggaatcaacggcagcgtcgccaccttcgtccttgagctgttt
gtagatgagcatctcaatgaagtcaacaggattctgaagaaggtgtttttaatcttccct
catttctgcttgggacgaggactcatcgacatggccaagaaccaggccatggcagacgcc
ttccagagactcggcaccaaacagactctggaccctcttcagtgggactttgtcgggaag
aacctgttcgccatggcagctgaaggtgttatcttcttcatcttcactattctcctgcag
tacaagttcttcattcgcttcaggccgtggtggacaaatcctgtgatgcctcctctcggt
ccggaggacgaggacgtcgccagggagagagagagggtcaaacgtggcagagcccagttc
gacattctcaccatgttcgacctgagcaaggtttataaatcaggcagaaagccggcggta
gatcgtctttgtcttgggattccccgcggtgagtgtttcggcctgctcggggtgaacgga
gcagggaagacttctacatttcgtatgctgactggtgatacacccatcacacacggaaag
gctttcctcagtaaccacagtgttctgacagacatggagcaagtccaccagctgatgggt
tactgtccgcagtttgacgccatcagtgacctgctgacgggtcgggaacatttggagctg
tacgcccgcctgcggggagtgccagaggtgtctgtcaccaaggtggcgcagtggggggtg
aagaggctggggctgacccagtatgcagagcaggaggccggaggctacagcggaggcaac
aagaggaaactctccacggccatctccctcatcggtgctccacctgttatattcctggat
gagcccaccactggtatggacccaaaagccaaaaggtttttgtggaactgcatcctcagc
gtcaccaaagagggaagagctgtagttctcacctcccacagtatggaggagtgtgaggct
ctctgcaccaggatggccatcatggtcaacggcaggtttcagtgtctcggatctgtacaa
cacctgaagaacaggttcggcgacggctacaccatcatcctccgtttgggggacaccaaa
tccgaccccgactcgtctctcgtcagcacctacatgcagaagtcttttcccagcatcgag
ctgaaggagcagcaccagaacgtgctgcagtaccagctgccctcgcacacctgctccctg
gctcgggtctttgacgtgctggccaacaactacgaggagctggacatcgtcgacttctcc
gtctcacagaccacgctggaccaggtgtttgtcagctttgctaaagagcagactgatgac
gaccatctcacagatgtggtcgtcagcaatgggacggtccaaccgaacccgcccgcccaa
ataaaccctcccgaaaccatcatccaaccacaaccaccggtcaaacctcctcagccgagc
aaagctccgcagccgccggggaagtcatcggacagcaatccaaaagcaggtaaaccaaaa
aaggcaaaagctagcaaggggagatctaccgcagagaagagcagcggtgtggcgatgagc
agattgtcccagccggaggaaaagggactggagtcaactcagacgagccgcaggggcagc
agcgcgtccagcagcagcagtagtggtgttcagagaggaaccactcaacctcaaatgtcc
aaacacagagcagagagctccagcaaagatccctctgctctctttatagtcggcagcaac
ttacaggacagcgcactctga
DBGET
integrated database retrieval system
