Embiotoca jacksoni (black perch): 138201220
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Entry
138201220 CDS
T10523
Symbol
ccdc174
Name
(RefSeq) coiled-coil domain-containing protein 174
KO
K25178
coiled-coil domain-containing protein 174
Organism
eja Embiotoca jacksoni (black perch)
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eja03019
]
138201220 (ccdc174)
03041 Spliceosome [BR:
eja03041
]
138201220 (ccdc174)
Messenger RNA biogenesis [BR:
eja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
138201220 (ccdc174)
Spliceosome [BR:
eja03041
]
Complex C
Other components
EJC/TREX
138201220 (ccdc174)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4078
Motif
Other DBs
NCBI-GeneID:
138201220
NCBI-ProteinID:
XP_069010631
LinkDB
All DBs
Position
Unknown
AA seq
553 aa
AA seq
DB search
MDKKKKPFDVTASSLVDLKAELYRKQELFKQEKLGQDGSAAFRAKSKVKKPNVWNKQNVG
VSERAEKDAEQLAEEQTSLDTSRHKLEEKARLYEQMTKGDFPDEETEGMFLVDFTQKIID
KKRETLAQKEREEEVEEGGSTTPVPPPQHPDEEWVDFVDALGRSRRCMKKDLPEFKKLDQ
DFKGKGSASSEKGLLSEDMRRELQRQEWEREEEEAMKRPVGPIHYEDIRGQEARDLGVGY
FAFSQDGEQRRKQRETLDMLRDQTTDQRTRRERLKDKRQAMLKARLAKVRQRKMKKAKLD
GAEEDEGEEEEEEEGEPTGPSPPPEEYPEVSMLKRVEVEIQERKDTKPGVPHVRDWDLGK
EFMFTEWKSRRRDERESEFAPPSAYFSDDKRPKPGKTKTRENKSNMSFKWTKFPTGIAEG
NTEPQAPPPTAPPAPPPTAPPAPPPSAPPAPPPSAPQPQQSPPTYSQPSESPSAPPFHPH
YPPPPPLFYPQLPPPHPMFSGSPISPFVPQYQNLYPPQYPPLTQFADPSWTQVPPQVPPP
SLDDMLSFYRNSS
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaaagaagaaacccttcgacgtgactgcttcatcgctggtggatcttaaagct
gaactgtacaggaagcaggagctgttcaaacaggagaaactcggacaagatggttctgct
gcattcagagctaaatccaaagtcaagaaaccaaatgtctggaataaacaaaacgttggt
gtttctgagagagctgagaaagatgcagagcagctggcggaggagcagaccagcctggac
acgtccaggcacaagctggaggagaaggccagactgtacgagcagatgacgaagggagac
tttccagatgaagagaccgaggggatgttcctggtcgacttcacccagaagatcatcgac
aaaaagagagaaacgctcgcacagaaggagcgagaggaggaggtggaggaaggaggcagc
acgacaccggttcctcctcctcagcacccagacgaggaatgggtggacttcgtagacgct
ttgggacgatctcggagatgcatgaagaaagacctgcccgagtttaagaaactggaccag
gactttaaaggaaaaggatcggcctcgtctgagaagggcttactctctgaggacatgcgt
cgagagctgcagaggcaggagtgggagagggaggaagaggaggcgatgaagaggcccgtt
ggaccgatccactacgaggatatcagaggacaagaggctcgggatctcggtgtcggatac
ttcgctttctctcaggatggagagcagcgcaggaagcagagagaaactctggacatgctc
cgagaccagacaacagatcagcgcacgaggagagagcggctgaaggacaagaggcaggcc
atgctgaaggctcgactcgccaaggtgaggcagaggaagatgaagaaggccaagctggac
ggcgctgaggaagatgaaggagaggaagaggaggaggaggaaggtgaaccgacaggaccc
tcccctccgcctgaggagtaccccgaggtcagcatgctgaagagggtggaggtggagatc
caggagaggaaggacaccaaaccaggagttcctcatgtcagagactgggacttgggaaaa
gagttcatgttcactgagtggaaatctcgccgtcgggacgagcgtgaatcagaatttgcg
cctccgtctgcgtacttttctgacgacaagagaccaaaaccgggaaagactaaaacccgg
gagaacaaatccaacatgtccttcaagtggacaaaattccccacaggaatcgctgagggc
aacacagaaccacaagctccgcctccaactgctccgccagctccgcctccaactgctccg
ccagctccgcctccgtctgctccgccagctccgcctccgtctgctccgcagcctcagcag
agtcctccaacatattcacagccctcagaaagcccttcagctcctccctttcatccccac
taccctcctcctcctcctctgttttatcctcagcttcctcctcctcatcctatgttttcc
ggttcacctatttctccgtttgtcccacaataccagaacctgtatcctccccagtatcca
cctctgacccagtttgcggaccccagctggactcaggtgcccccccaggtccctcctccg
agtctggacgacatgctgtccttctacaggaactcttcttga
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