Embiotoca jacksoni (black perch): 138202100
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Entry
138202100 CDS
T10523
Symbol
rnf40
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1B isoform X1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
eja Embiotoca jacksoni (black perch)
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
eja04121
]
138202100 (rnf40)
Enzymes [BR:
eja01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138202100 (rnf40)
Ubiquitin system [BR:
eja04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
138202100 (rnf40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
BRE1
zf-C3HC4_2
zf-C3HC4_3
ADIP
Rab11-FIP3
ATG14
zf-RING_UBOX
zf-RING_2
zf-RING_5
OVT1
Motif
Other DBs
NCBI-GeneID:
138202100
NCBI-ProteinID:
XP_069011935
LinkDB
All DBs
Position
Unknown
AA seq
1000 aa
AA seq
DB search
MSGAGGGKRPSGGDSPPGPPEKKSKKEEKTTTTLIEPIRIAGVSSTEEMDMKVLQFKNKK
LCVRLEQRQAMEDELREKIEKLEKRQATDDTTLLIVNRYWSELEENVHVLRKRVEPEAPV
TSTPAPPLAPLPEPTPIEEDGVTLASPTAVVPPPPLPEAQNEGEQPEQPQEERPEERQDE
QQPPPPAGSEELMTPTEAPLDSKTDASLPPPPLSENARGFLATLEQSSEEELTLHLQDRM
QFSKEAIACLVCVFDRLHCRINDMCKLASACENDSQPDIINVNHTLLEENSRLRDLATLL
QGRHHKMSMEYNELVDKVTSSETKVSEMETTVEDLQWDIEKVRNRVQKLNKHLADSMEQL
KSGYSSSGSSGGLPGGQITLNIQKFESLNAELEHNQELANSRMAELEKLQVELQEAVRES
EKLKMDLRNIPEEVVKETLEYKCLQSQFSLLYNESLGVKTQLDEARALLLTAKNAHLRQI
EHMESDELSLQKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQNLAANEQAGPINREMRHLI
SSLQNHNLQLKGDVQRYKRKLRETQMEINKLRCQSGDTGVLILEETTNDSIDVKKEDDED
QEEEEERRKELERQRAREREREREAERERERERERERQRSDELKRKDSDTLKMLRVELKK
AQESQKEMKLLLDMYKSAPKEQRDKVQLMAAERKSKAEVDELRMRVRELEERERKESKKL
ADEDALRKIRVAEETIEHLQKKLAATKQEEEALLSEMDVTGQAFEDMQEQNSRLLQQLRE
KDDANFKLMSERIKSNQIYKLLKEEKEELADQVLTFKTQVDAQLLVVQKLEEKEGVLQST
LAALEKELSVRTQALELNKRKAVEAAQLAEDLKVQLEHTQAKLKEIQVSVAENRTARERE
SSNLKRAQEDLSRLRRKLEKQKKVEVYSDADEILQEEINQYKAKLRCPCCNTRDKETVLT
KCFHVFCYECLKMRYDTRQRKCPKCNCAFGANDFHRIYIT
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtgctgggggagggaagcggccctcgggaggggacagcccccctggcccacct
gagaagaaaagcaagaaggaggagaagaccaccaccacacttattgaaccaatacgcatc
gcgggagtctcctctacggaggagatggacatgaaggtgctgcagttcaagaacaagaag
ttgtgtgtgcgcttggagcagaggcaggcgatggaggatgagttacgtgagaaaattgaa
aagctggagaagaggcaagccaccgatgatacaacgctgctgattgtcaatcgctactgg
tcggagttggaagagaatgtgcacgtcctacgcaaacgtgttgagccagaggctccggta
acctctaccccagccccacccttggccccgctccccgagcccacccctatagaggaggat
ggtgtcactctggcgtcaccaaccgccgttgtgccgccacctcctctcccagaggcccag
aatgagggagagcagccagagcagccgcaggaggaacgtccagaagagcgccaggacgag
cagcagccccctcctcctgctgggtcagaagagttaatgacaccaactgaggcaccgctg
gattcaaaaacggatgcatcgctgcctcctcctcctctaagtgaaaatgccaggggtttt
ctggccacgctggagcagagcagtgaggaggaactgaccctgcacctccaggaccgaatg
cagttcagcaaagaagccattgcctgcttggtctgtgtctttgacaggctgcactgtcgc
atcaacgacatgtgcaagttggcttcagcatgtgagaacgatagccagcctgacatcatc
aatgtgaaccacactctgctggaggagaacagtcgacttcgagacctagccactctccta
cagggacgtcaccacaagatgtccatggagtacaatgagttggtggacaaggtgaccagc
tcggagaccaaagtgtctgagatggagacgacggtggaggacctgcagtgggacatcgag
aaagtccgcaacagagtgcaaaagctcaacaaacacctagcagattcaatggagcagcta
aagtctggatacagcagcagtggcagctcaggtgggctacctggaggtcagattactctg
aacatccaaaagtttgagagtctcaatgccgagttggagcacaaccaggagctggcaaac
agtcgcatggcagagttggagaaactgcaggtggagctccaggaggctgtgagggagagc
gagaagctcaagatggacttgcgcaatattccagaagaggttgtgaaagaaaccttagag
tacaaatgtctgcagtctcagttctctctgctgtacaacgagtctcttggggtcaaaacc
cagctggatgaggcccgggctctcctgctcaccgcgaagaacgctcacctccgacagatt
gagcacatggagagtgatgagctgtcccttcagaagaagctgcggacggaggtcatccag
ctagaggacactctggctcaggtgcgcaaagagtacgagatgctgcgcatcgagtttgag
cagaacctggcagccaacgagcaagcaggaccaatcaacagggagatgcggcatttgatc
agcagccttcaaaaccacaacctacagttgaaaggtgatgtgcagcgctacaagaggaag
ctgcgggaaacacagatggagatcaataagttacgctgtcagagtggcgacaccggggtt
ctgattctagaggagacgacgaatgacagcatcgatgtgaaaaaggaggacgacgaagac
caggaggaagaggaggagaggaggaaggagctggagaggcagcgagcccgggagagggag
agggagagggaggccgagcgagagcgagagagggaacgcgagagagagaggcagcgcagc
gacgagctgaagaggaaggactcggacacactgaagatgctcagagtagaactcaagaaa
gcgcaggagtcccagaaagagatgaagctcctgttggacatgtataagtcagcgccaaag
gagcaaagagacaaagtgcagctgatggcagctgagcgcaaatctaaagctgaggtggat
gagctgaggatgcgagtgcgagagctggaggagagggagaggaaggagagcaagaaactg
gccgatgaagatgccctcaggaagatccgagtggcagaggagaccattgagcacctgcag
aagaaactcgctgccactaagcaggaggaggaagccctgctgagtgagatggatgtaacg
gggcaggccttcgaagacatgcaggagcagaacagccggctgttgcagcagttgcgggag
aaggatgatgccaatttcaagctgatgagcgagcgaatcaaatccaaccagatctacaag
ctgctgaaagaggagaaggaggagctggccgaccaagttctgacattcaaaacccaggtg
gatgcccagctgctggtggtgcaaaagctggaagaaaaggagggagtcctacagagcaca
ttggctgctctggaaaaggagctgtctgtcagaacacaagcactagaactcaacaagagg
aaggcggtggaggctgcacagctggcagaggacctgaaggtgcagctggagcacacgcag
gccaagctgaaggagatccaggtctctgtggctgagaaccgcacggcccgggagagggag
agcagcaacctgaaacgcgcacaggaggatctgtccaggctgagacggaagctggagaaa
cagaagaaggtggaggtgtactccgatgcagatgagatcctacaggaggaaattaatcag
tacaaggccaagctgcgctgcccctgctgcaacacgcgagacaaggagacggtgctcaca
aagtgtttccacgttttctgctacgagtgtctgaagatgcgctacgacacgcggcagagg
aagtgccccaagtgcaactgtgccttcggcgccaacgactttcaccgcatctacatcacc
taa
DBGET
integrated database retrieval system
