Embiotoca jacksoni (black perch): 138202166
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Entry
138202166 CDS
T10523
Symbol
pms2
Name
(RefSeq) mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja03430
Mismatch repair
eja03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
138202166 (pms2)
03460 Fanconi anemia pathway
138202166 (pms2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eja03400
]
138202166 (pms2)
DNA repair and recombination proteins [BR:
eja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
138202166 (pms2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
138202166
NCBI-ProteinID:
XP_069012052
LinkDB
All DBs
Position
Unknown
AA seq
864 aa
AA seq
DB search
MSDACSEPAGAIKAIDKHSVHQICSGQVVLTLATAVKELVENSIDAGATNIDVKLKECGV
EQVEVSDNGKGVEEDNFEGLTLKHHTSKLRDFSDLIHVETFGFRGEALSSLCALSDLSVL
TCHESSQVGTKLVFDHKGHLVQRSPHPRQQGTTISLQQLFSTLPVRHKEFQRNIKKEYAK
MIHILQSYCIVSTGVRITCSNQNGQGKRSTVLSTSGSQNMRDNIGAIFGPKQPQSLLPFQ
QVSPTENIIEEYGLKEEELPKQLFSITGFVSRGDHGVGRSATDRQFFFINNRPCDPLKVT
KLVNEVYHMYNRHQYPFVALNIAVASECVDVNVTPDKRQIFLQEEKLLLAILKTSLITMY
EAGVNKISLNYTPIPSTNATSKLCQLALSKKNEAEPGEDIRTVIPSPKSSMNLAGLKAAF
SNHYSSNSGNKSSAEKASTSGPMQKTLQSFFKDSVTPSAVNQSVKSPVKPTREAAKCSPV
GKSVLDGFRYGRTPCCDTDSEKDSMTVSSCDSTMAAPDIHCSDLEFSSPKPMIDSDSVKN
ETLKETLDSSHTVPEDLKLQTEACTSTEDSTMSPESKRARKENPHFPTEQKSSTVLNGCE
DSSSVVDAPVCLQRRTVPLHFSLQELAGKMRRLQDQQKQMNEVKLRYRRFRAKINPGENQ
SAEEELKKEISKEMFKEMEIIGQFNLGFIITKLNSDIFMIDQHATDEKYNFEMLQQHNVL
QGQKLIVPQKLHLTAVSENVLMENIEIFRKNGFEFLVDEDAQVMERVKLVSLPTSKNWTF
GPADIEELIFMLSDSPGVMCRPSRVRQMFASRSCRKSVMIGTALSVSEMKKLVVHMGEIE
HPWNCPHGRPTMRHLANLDIISQD
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgcttgctctgaacctgctggagcaatcaaggctattgacaaacactcagtg
catcagatctgctctggacaagtggtgctgactttggccaccgctgtcaaagagctggtg
gagaacagcattgatgcaggagccaccaacatcgatgtcaagctgaaggagtgcggagtt
gaacaagtggaagtgtcagacaatggtaaaggtgttgaggaggacaactttgaaggacta
acactgaagcatcacacatcaaagctacgagatttctcagacctcatccatgtggaaaca
tttggcttcagaggtgaagccctcagctctttatgtgctctgagtgacctcagtgtgctt
acctgccacgagtccagccaggtgggcaccaagctggtgtttgaccacaaaggccaccta
gtgcagcggtcacctcatccccggcagcaaggcaccacgatcagcctgcagcagctcttc
tccaccctacccgttcgacacaaggagttccagcgcaacattaagaaggagtacgccaaa
atgatacatatcctgcagtcctactgcattgtttctacaggagtgcgtattacctgctcc
aatcaaaatgggcagggaaagcgcagcactgtcctcagcaccagtggcagccaaaatatg
agagacaacatcggagccatatttggaccaaaacagccacagagtcttctaccttttcaa
caagtatctcctacagaaaatattatagaagaatatggactcaaagaggaagaactaccc
aaacagcttttttccatcacagggtttgtgtctcgaggtgaccatggtgtcgggagaagt
gccacagacaggcagttctttttcattaacaaccggccatgtgacccccttaaggtgacc
aaacttgtgaatgaagtgtatcatatgtacaacagacatcagtatccatttgttgcgttg
aacatagctgtcgcctcagagtgtgtggatgtgaatgtgacgccagacaaacgacagatt
tttcttcaagaggagaaactcttgctggctattttaaagacctctctcatcactatgtac
gaggctggagtcaataagatcagcctgaactatacaccaatacccagcaccaatgcaacc
tctaaactgtgtcaactcgccctgtctaaaaagaacgaggcagaacctggagaggacatc
cgaacagtgattccaagcccaaagtcctccatgaacctggccggcctaaaagctgccttt
tctaatcattacagctccaattctgggaacaagtcaagtgcggaaaaagcctccaccagc
ggcccaatgcagaaaacgctccagtctttttttaaggattctgtaacaccttctgctgtc
aaccaaagtgtaaaatctcctgtgaaacctacaagagaggcagctaaatgctccccagtg
gggaagtcggtgctagatgggtttaggtatggcagaacgccgtgctgtgatacagactct
gaaaaagacagcatgactgtgtccagttgtgactctacgatggcagcacctgatattcat
tgttctgatctggagttcagctctcctaaaccgatgattgacagcgacagtgtaaaaaac
gaaacattgaaagaaacattggacagtagtcacactgttcctgaagacctgaagttacag
actgaagcgtgcacttctactgaggactctactatgagtccagagtctaagagagccaga
aaagagaatccacatttccccacagagcaaaagtccagcactgttttgaatggttgtgag
gactcttcttcggtggtggacgccccagtctgcctacagaggaggacggtgcctctacac
ttctctttacaagagctggcagggaagatgaggaggttacaggaccagcagaaacagatg
aacgaagtgaagctacgctaccgtcgcttcagggccaagatcaaccccggagaaaaccaa
agtgcagaagaagagctcaagaaagagatcagtaaagaaatgtttaaggaaatggagatc
atcggtcagtttaatctgggcttcattatcaccaaactcaactcggacatcttcatgatc
gaccagcatgccaccgatgagaagtacaactttgagatgctccagcagcacaatgtgctc
caaggacagaaacttattgtcccacagaaacttcacctcaccgcggtcagtgagaacgta
ctcatggagaacattgagattttcaggaagaatggttttgaattcctggttgatgaggat
gctcaggtcatggagagagtgaagctggtgtcgttgcccaccagtaaaaactggacattc
ggcccagcggacattgaagagctgattttcatgttgagtgacagcccaggcgtcatgtgc
cgaccgtccagagtcagacagatgtttgcctccagatcttgtcggaaatctgtgatgatt
ggcaccgctctgagtgtcagtgagatgaagaaactggtggttcacatgggggagattgag
catccgtggaactgtcctcacggcaggccaaccatgagacacctcgccaacctggacatc
atctcacaagactga
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