Embiotoca jacksoni (black perch): 138202542
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Entry
138202542 CDS
T10523
Symbol
utp20
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
eja Embiotoca jacksoni (black perch)
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eja03009
]
138202542 (utp20)
Ribosome biogenesis [BR:
eja03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
138202542 (utp20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
Phage_portal_2
Motif
Other DBs
NCBI-GeneID:
138202542
NCBI-ProteinID:
XP_069012709
LinkDB
All DBs
Position
Unknown
AA seq
2820 aa
AA seq
DB search
MKIKSKSSFHKSENTYRFLTFAERLSHVNIDVIHRIDRTGSFAEEVETYFSEGLTKWRDL
NLTEHFTAFLKEVSNKSQSFNLLVFHQKFIVESLKTHLAVKNSLAYQPLLDLVVQLARDL
QADFYPHFPDFFTLITSLLDTKDTELLEWAFTCLSYLYKYLWRLMVKDMTNIYSLYSTLL
EHKKEHIRNFAAESFSFLMRKVPDLDALLTHVFSDLEEHPNKAEGAGQLLFEMCKGVRNM
FHSCAATALPVALKKLGPTTSRGVSLPWDSVRDALDHTVQAAADHVNREHFLVLWESLQV
SVVDVLGVAEVKGEDPDVATQQLERLLFILHTLVSHRGGAKITKPEAVCQTVLRLTRSSS
LSASCSRLLLQITSSLLLGENISLPKALIQETVQKVFSSTMGEDLILEFTKEMFTMKYFE
QLFLPSLLRFTAGLFGRGDALSRHCGLDVLVSLILAKAPPPTDGSMAFETYPLLFPEQTT
GESSGVEAGQASSPTSEQPAVSELVLSLIKCPEEQNQSITNLSLPWAALVLLPHLRPLAP
ARVVLAVQTFLNHLLCEIETERLGRAALFVARQALSCLLSLDSSPQVRFLVTVDKVNTIL
RMFPTDLSALLLGDLYYTRLSLSGVSEHLSHNALLELYQMLHANLSSNISKIRLLTLRIL
SQFEAELPPQTEGEENVEVQPVFAVCLQAELVPASVQDYREKLLHLRKLRHDLVPRSLPQ
GPSGSFQQVPLRYLIAMLFVNFRPLWDAVIELLVSHARGMDNKDFWRVYHEHLEMVAGLA
ENELQEDDEDDDDNDGEESGVQRGPGCDVIESGDLGVLFLEQLKSTSDPNERTDFPNFRS
LLWRAMAEFPDRVEPRSRELSPLLLRFIRNEFYPADLLVAPTQDLRKRSDAALEESGMAV
EVEEEREEEEVEEGSRQERKTLPRRAAAKQLITHLKVFAKFTNPRSLYQESSLRELYDQL
LCHQDQQIQRVALDCVLTYKDPNIVPYKENLERLLDDKHFKEEIVHFNISEETEVVDASH
RGTLIPLLMRILFGRLRTKAGSKFQGKASAATRSSIILRFLAGCKAEELGMFIDQLLEPV
IHHSQGSCLAAVQRAVAETDSGAVLPLGRQHSLLNVINVVIQKLGHLIHIYLPRVLQILL
CLTSSVSTILDNRDQLRAGCISPLKNLRRLGIMRIQDFFDGFDSYSFSPDELDAVFQGIV
WPQVCRLPTESPYSPTPLLKLIHVWCKNARFFPLLALQRPDHPECNVLLNVFALLSAKKA
SPATIAMVMDIAESLATTEDFAATEAETELSVNGCVFPRPEEGALTTDSLTQGSRLLLPH
ISTLLRYLSGVVRNTDRLKKKKFRAQVAKELNILSKVSRFVSDKEQSSVLISLLLPYLQK
GHNPQETEIDILATVQNLLRQCVQPSSFLRPLGKLFSVIHNKLPRQALTNVFQTLSDLEP
SLTYITELATKLNAFDSRHLDEIYFDVRLTAFQEAARRVRDMQTLDLDYISTIMYNCFHT
FEIGDMSLGDNANMCLSAVITQLAAVGAGEQIYKDVVQHTILDAVHKGLRSKTESVQHEY
TTVLACLVKTFPSKKEFRDLVQLTDYNDPESDFFEHMKHIQIHRRGRALRKLAKQLTEGT
VQLTPRSLQNYIMPYAMTALLDEKMLKHENMTSASVEVVGAVCRRLTWSKYLYYLKHFIH
ILQTAQAEQKLAVSLLVTVLDAFHFDHQTLSREMEAAKAREAASVAIDADDEDEPAADEA
GGSDDEETMAIDSKAASTDVPMEADTADTEKNGIPEKVVSTKATGEVAPKPVVVASGLPQ
SREELESLISAIQQTVNNSVLPRLHKCLTAKLKRDEEHKAVKSKDVKEEEVARIPIAFAM
VKLMQTLPPNIMDANLPGILIKVCVVLRNRFQEVRDVARGTLVKIIETLGCRYLHYLLKE
MQSVLVKGYQVHVLTFTVYQLLSVVSPTLKSGDLDPCMNMLIDIFNNELFGAVAEEKEVK
GIVSKLMEARHSKSMDSYELLARFCSKESITKLILPLKEILETSSRLKVCNRVAAVLRRL
VLGLLSNTGMTSQDILLLSHGLVSQSLPLLTKRDREKASVRPPPDPRLPPPSCLLLPPTP
KRGGQRAPVSSRTNMHILVDSGLKLLHLSLKKSKVTSSEASTLEMLDPFILLLLDCLDSM
HVKVITEALVAFTWLLKFPLPAVEQNADELTKQLFVLLKDYSKAGAARGENYHLVQNCFK
TITILVKNIKSNKISEIQLQVLLGYAEEDIYDQSRQATAFGLLKAILSRKLVVPEMEEVM
KKVAKLSVTGSNGMIRIHCRQIYLKYLLDYPLGKRLREHLDFVVAQLHYEHDTGRESVLE
MLAYIFQTFPQKLLLQHCSLFFAPLALVVVNDDSARCKKMAATAIKTLLGQLDSNQQNIL
FSFVNTWLNAEKASLRRLGAQICGLYVEVEEEKFARRMDDLLPLVEREINSDNYEDIEEE
QEERGADRLLFSYLTLITKLSKHCGLLELSKPHDTLRHIWGHIEAHLRYPHCWVWLTASQ
LFGQLFAAQQAEELVARWRGEGDASPPSAATDFITSNLDRKMRELALSFCHQLQSKFLDT
ASGEQVIKNLLFVGKVIYLVSPESQDTSPQEEVKDEEEVEEREREDGEGEEEKEQEEEEE
EDDKDDKDDRPPSLLWLMKKLSLMAKREAAYSPKVPLKRTCVFKFLGAIAMDLGKDRLGP
YLTTIITPLYRELDSTYADQDPTLKNLAQELIELMKKQVGLEKFSLAFSAVQKEFSQRRV
ARKRHRAMQAVANPDVAAKKKLKKHKNKIEAKKRKIEFLRPGYKAKKHRSHALKDLAMVQ
NT seq
8463 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcaaatccaagtcttcgttccacaaatccgagaacacctacaggtttctcact
ttcgctgaaagactttcccacgttaacatcgacgtcatccatcgtattgacaggactgga
tcttttgcggaggaagtagaaacatacttctctgaaggactgacaaaatggagagacctg
aacttaacagaacacttcacggcgtttttgaaagaggtatccaacaagagccagtcattc
aacctgctggttttccaccagaagttcatagtggaaagtctgaagacacacctggctgtc
aagaacagtctggcctaccagcccctgctagacctggtggtgcagctggccagagacctg
caggcggacttctatccgcacttccccgacttcttcactctgatcacctcactgctggac
acgaaggacactgagctgctggagtgggctttcacctgcctctcctacctctacaagtac
ctgtggaggctcatggtgaaggacatgaccaacatctacagtttgtacagcacgctgttg
gaacacaagaaggagcacatccgcaattttgcagcagagagcttctcttttctgatgaga
aaggttccagatctcgatgccctgctgactcacgtcttctccgacttggaggagcacccc
aacaaagcggagggagcgggtcagctgctgttcgagatgtgcaaaggagtccgaaacatg
tttcactcctgtgctgctactgcgctccctgtggctttgaaaaagctcggtcccacaacc
agccggggagtctctctaccgtgggactctgtccgggacgctctggatcacacggtccag
gctgcagccgatcatgttaacagagaacacttcctggttttgtgggagtccttacaggtc
agtgttgttgatgtcttgggtgtggcagaggtgaaaggagaagacccagacgtggcaacg
cagcagctggagaggctgctgttcatcctccacaccctggtgtcccacaggggcggagcc
aagatcaccaagccagaagccgtctgccagacggtgttgcggctgactcggagctcttct
ctgtcagcttcctgctcccgtctcctcctccagatcacctcttcgctgctcctcggggag
aacatcagcctgcccaaagcactcatccaggagactgtccaaaaggtgttcagcagcacg
atgggagaggatctgatactggagttcaccaaggagatgttcaccatgaagtactttgaa
cagctcttcctccccagcctgctgcgcttcaccgctgggctgtttggccgcggcgatgct
ctgtctcgccactgcggtctggacgtgctggtcagcctgatcctcgccaaagccccgcct
cccacagatggctccatggcctttgaaacctacccgctgctcttccccgaacagaccaca
ggagagtcgagcggtgtggaggcgggtcaggcgagcagtccgacgtcagagcagccggca
gtgtcggagctggttctgtctctgatcaaatgtcctgaggagcagaaccagtccatcact
aacctgtcgctgccatgggccgccctggtactgctgcctcacctcagacctctggctcca
gctcgtgttgttcttgctgtgcagactttcctcaaccacctcctgtgtgagatcgagaca
gagagactcgggagagctgctctgtttgtagccagacaggctctgagctgcctcctctct
ctggacagctctcctcaagttcgcttcctggtcactgtggacaaagtcaacaccatccta
cggatgttccccacagacctgtcggctctgctgctcggagacctgtactacacccgcctg
tcgctcagtggggtttcagagcacctctcccacaatgcactgctggagctctaccagatg
ctgcacgccaacctctcctccaacatttcaaagatccgcctgctgactctgaggatcctc
tctcagtttgaggcagagcttcctccacagactgagggtgaggagaacgtggaggtgcag
ccggtgtttgcggtttgcctgcaggccgagctggtgccggcttcagtgcaggactacaga
gagaagctgcttcacttgcggaagctgagacacgacctggtgccgcgcagcctgccgcag
gggccgtcgggctccttccagcaggtgcctctgcgatacctcattgcaatgctgtttgtg
aacttcaggcccctgtgggacgcagtcattgagcttcttgtgagccatgccagggggatg
gacaacaaggacttctggagggtgtatcacgaacatctggagatggtggcagggctggct
gaaaatgaactgcaagaggatgatgaagatgatgacgacaatgatggggaagagtctggt
gtgcagagggggccgggctgtgatgtcattgaaagtggggatctgggcgtgctgttcctc
gagcagctgaagtcgacctctgaccccaacgagaggacggacttccccaacttccgcagc
ctgttgtggcgtgccatggccgagttccccgatagggtggagccccgcagccgtgagctg
agccctctgctgctcaggttcatcaggaatgagttttatcccgccgacctgctggtggcg
ccgactcaggatctgaggaagagaagcgacgctgctctggaggagtcagggatggctgtg
gaggtggaagaggagagagaggaagaggaagtggaagagggaagcagacaggagaggaag
actcttccaaggagagctgctgccaagcagcttatcacccatctgaaggtgttcgccaaa
ttcaccaaccctcgctccctctatcaggagagcagcctcagggagctctatgaccagctg
ctctgccatcaggaccaacagattcagcgagtggcgctggactgtgtgctcacatacaaa
gaccccaacatagtaccgtacaaggagaatctcgagaggctcctggacgacaaacacttc
aaagaggagattgtccatttcaacatctctgaggagacagaagtggtggatgcgtcccac
agagggacactcatcccgctgcttatgaggatcctgttcggccgtctgcgcactaaagcc
ggcagcaagtttcaggggaaggcgagcgccgccacccggtcctccatcatcctgcgtttc
ctggcaggttgtaaggctgaggagctgggaatgttcatcgaccagctgctggagcccgtc
atccatcacagccaaggctcctgtctggctgcagtgcagcgggcggtagcggagacggac
tcgggtgccgtcctgccgctgggccgtcagcacagcctgctgaacgttatcaacgtggtg
atccagaaactgggccacctcatccacatctacctgcccagagtgctgcagatcctgctg
tgtctcacgtcctctgtgtccaccatcctggacaacagggaccagctgcgagcaggttgc
atcagtcctcttaagaacctgaggagacttggtatcatgaggatccaagacttttttgat
ggctttgactcgtacagcttcagcccagatgagctggatgctgtgtttcagggcatcgtc
tggcctcaggtgtgtcgcctccccacagagagcccctactcccccacccctctgctcaaa
ctcatccatgtgtggtgcaaaaatgccaggttcttccccctcctggccctccagaggccg
gaccacccagagtgcaacgtcctgttaaatgtcttcgccctcctctcggccaagaaagct
tccccagcgaccatcgccatggtaatggacatagccgagtctctggcaaccacagaagac
tttgcagccacagaggccgagactgagctcagcgtcaacggctgtgtgttcccgcggcct
gaagagggcgctctcaccacagactcattaactcaaggctccagactgctcctgcctcac
atctccaccctgctgcgctacctcagcggagtggtacgcaacacagaccgactgaagaag
aagaagttcagggcacaagtagccaaagagctcaacatcctctccaaggtcagccggttt
gtgagcgacaaggagcagagctcggtgctcatcagcctgctgcttccttatctccagaaa
ggccacaaccctcaagagacagagattgacatcctggccaccgtacagaacctgctgcga
cagtgcgtgcagccctcctccttcctgcggccgctcggcaaactcttctccgtcattcac
aacaagctgcccaggcaggccctcaccaacgtcttccagactctgtcggatctggaacct
tcgctcacatatatcacagaattagcaacaaagctgaacgcgttcgacagtcgacacttg
gacgagatctactttgacgtgcgtctcacggctttccaagaagctgccaggcgagtcaga
gacatgcagactctggacctggactacatcagcaccatcatgtacaactgtttccacaca
tttgagattggtgacatgtcgctgggagacaacgccaacatgtgtctgtctgcagtgatc
acccagctggcagcggtcggggccggagagcagatctacaaggacgtagtgcaacacacc
atcctggacgctgtacacaaggggctccgcagcaagacggagagtgtgcagcatgaatac
accaccgtcctcgcctgcctggtgaagacctttccctccaagaaagagttccgggacctg
gtgcagctcaccgactacaacgaccccgagtccgacttcttcgagcacatgaagcacatc
cagatccaccgtcggggtcgcgccctgaggaagttggccaagcagctgacggagggcacg
gtgcagctgacccctcgctccctgcagaattacatcatgccgtacgccatgacggccctg
ctggacgaaaagatgctgaagcatgagaacatgacatcagcgtcggtggaggtggtgggc
gcagtgtgtcgcaggctgacctggtccaagtacctctactacctgaaacacttcatccac
atcctgcagacggcgcaggctgagcagaagctggctgtcagtttactggtcacagtcctg
gacgcgttccacttcgaccatcagaccctcagtcgagaaatggaagctgccaaagccaga
gaagctgcgagcgtcgccatcgacgcagatgacgaagacgaacctgcagccgacgaagca
ggcggcagcgatgacgaggaaacaatggcgattgacagtaaggctgcttccaccgatgtc
cccatggaagcggacactgctgacacagaaaaaaatggcatcccagagaaagtggtcagc
actaaagccacgggggaggtggctcctaaaccagtcgtggtggccagcggactgccgcag
agccgagaggagctggagtctctgatcagtgcgatccagcaaactgtcaacaacagcgtg
ctgccccgcctgcacaagtgtctcaccgcaaagcttaagcgtgacgaggagcacaaggcc
gtgaagtcaaaggatgtgaaggaagaggaggtggcgcggataccgatagccttcgccatg
gtcaaactgatgcagactctgcctccaaacatcatggatgccaacctccccggcatcctg
atcaaggtctgtgttgtactgaggaaccgtttccaggaggtacgagacgtggcgagggga
actctggtgaagatcatcgagacgttaggctgcaggtatctgcactacctgctcaaagag
atgcagagcgtcctggtcaagggctaccaggtccatgttctaacattcacagtttaccaa
ctgctgtccgtcgtcagtccaaccctgaagagcggagacctggacccctgcatgaacatg
ctcattgatatcttcaacaacgagctgttcggggccgtggccgaggagaaggaggtgaag
gggatcgtttccaagctgatggaggcgcgtcacagcaagagcatggactcctacgagctg
ctggcccggttctgcagcaaggagagcatcaccaaactcatactgccgctgaaggagatc
ctggagacttcctccaggctgaaggtgtgtaaccgggtggctgcagtcctgcggcggctg
gtcctgggtctgctctccaacactggcatgacttcacaagacatcctgctgctgagccac
ggcctggtcagccagagcctgccactgctcaccaagagagaccgagagaaggcgtcagtt
cggcctccccccgaccccagactgcctcctcccagctgcctgctgctgcctcccactccg
aagagaggaggtcagagagctcccgtcagcagccgaaccaacatgcacatcctggtggac
tctggcctcaagctgctccacctgagtctgaagaaatccaaagtgacgtcgtctgaggct
tcaactctggagatgctggatccgtttatactgctgctgctcgactgcctcgactccatg
catgtcaaggtgatcacggaggctctggtggcgttcacttggctgctgaagttccctctt
ccagccgtggagcagaacgccgatgagctcaccaagcagctgttcgtcctgctgaaggat
tactccaaggcgggagcggcccgcggggagaactaccacctggtccagaactgcttcaag
accatcactatcctggtgaagaacatcaaaagcaacaagatctccgagatacagctgcag
gtgctgctgggatacgctgaggaggacatctatgaccagtcacgtcaggccaccgccttc
ggcctgctcaaggccattctgtccaggaagctcgttgtcccggagatggaggaggtgatg
aagaaagtggccaagttatccgttaccggcagtaacggcatgatcaggatccactgtcga
cagatctatctgaagtacctgctggactacccactgggcaagaggctgagagaacacctg
gactttgtggtggctcagctgcactacgagcacgacacaggcagggagtctgtgctggag
atgctggcctacatcttccagactttccctcagaaactgctgttgcagcactgcagtctg
ttcttcgccccgctggctctggtcgtggtcaacgatgactctgcacgatgtaagaaaatg
gctgccacggccatcaagacgctgctcggccagctggactcgaaccagcagaacatcctg
ttctccttcgtcaacacctggctgaatgcagagaaggccagcctgcggcgtctcggggct
cagatttgcggtctgtacgtggaggtggaggaggagaagtttgcccgtcgaatggacgac
ctgctgccactggtggagagagagatcaactctgacaactatgaagacattgaggaggag
caggaggagagaggagctgaccggctgctcttcagttatctgactctcatcaccaaactc
agcaaacactgcggcctgctggagctcagcaagcctcacgacacactccgccacatctgg
gggcacatcgaagcccacctgcggtaccctcactgctgggtgtggctgaccgcctcccag
ctgtttggccagctgtttgcagctcagcaggcggaggagctggtcgcccgttggagagga
gaaggtgacgcttcacctccgtcggcagccactgacttcatcaccagcaacctggacagg
aagatgagagagctggcgttatcgttctgccatcagctgcagtccaagttcctcgacaca
gcgtcaggagagcaggtgatcaagaacctgctgttcgtcggcaaggtgatctacctcgtt
tcccccgagtctcaggacacttcgcctcaggaggaagtgaaagacgaagaggaggtggag
gaaagggagcgtgaagatggagaaggagaagaagagaaagaacaggaagaggaggaagaa
gaggacgacaaggacgacaaggacgacaggcctccgtccctcctgtggctgatgaagaag
ctgtctctgatggcaaagagagaggcagcgtattctcccaaagttcccctcaagagaaca
tgtgtgtttaagttcctgggagcgatagccatggacctggggaaggaccggctcggaccc
tatctgaccaccatcatcacccctctgtacagagagctggacagcacgtacgcagatcaa
gatccaacactgaagaatctggctcaggagctgatcgagctgatgaagaaacaagtgggg
ctggagaagttctctctggccttctccgctgtccagaaggagttttcacagagacgagtg
gcacgcaaacgacacagagccatgcaggccgtggctaaccccgacgtcgccgccaagaag
aagctcaagaagcacaagaacaaaatcgaagccaaaaagaggaagatcgagttcctgcgg
cccggatataaagccaagaagcaccggagccacgcgctgaaggacctggccatggtgcag
tga
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integrated database retrieval system
