Embiotoca jacksoni (black perch): 138202646
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Entry
138202646 CDS
T10523
Symbol
dhx57
Name
(RefSeq) putative ATP-dependent RNA helicase DHX57 isoform X1
KO
K13026
ATP-dependent RNA helicase DHX57 [EC:
5.6.2.6
]
Organism
eja Embiotoca jacksoni (black perch)
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
eja03012
]
138202646 (dhx57)
Enzymes [BR:
eja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
138202646 (dhx57)
Translation factors [BR:
eja03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
138202646 (dhx57)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
RWD
zf-CCCH_4
HA2_N
zf-CCCH
AAA_22
Torus
zf_CCCH_4
nSTAND3
NB-ARC
AAA_19
NPHP3_N
Viral_helicase1
Motif
Other DBs
NCBI-GeneID:
138202646
NCBI-ProteinID:
XP_069012969
LinkDB
All DBs
Position
Unknown
AA seq
1482 aa
AA seq
DB search
MCESVPLCGGYTIVCRCDGTLIEEMNARKRGGKPNRGGGRFNKPRGGGGRGGGGGRGGGG
GGSRKGGAGLWDDGDDFSVDFAPLPRSSRPGRGRGGGGGGGGGGHAGGRDSGRGRGGGRD
RDRDRDRDRDRDSGRNGKSSGKALPRSLASTRMCPKPGDGIRPEASNMPLQRIFMTNENQ
EQLKELLRDLQTQDFDEPYDVSGSDYSGGEEEEFDELDQRDEGQFWATNDEPVERAESPA
YDPESDDERPTPEPVISLFAIGKLCRYGFDRERSKQALESGGGELGATLEQLLHQVFSER
YGQKAVSPEGLGGVPMDECLSQRQEEALALTAIYGERFNERIANAVWTVTLDLSFLSDKA
AKNGREAGSRKGGGAVNMRDVCKFYMKGQGCRFGDKCKFKHEFPTKGRSVAGSSDLDGPS
QPGFSSYSPPEYELEVRFPKGNRYPFQAPVVAFSTNDESVGATGRLSVTERLFGEALAAA
KSSEPVVYTLTTLCEDESTMKELLAVSHHKYSTPPPVVTLPPPSLAVAKSKSVRSTASEE
STSNHTNSRRTRSNQRPMDLKEAADAEELDERDEDEEDQAVPVENESYVNLRKKMVHKHN
QKIGNLLQENGKLCREFQRKQSSRRFRSMLEQRKNLPAWQDKVKILDMLDQCQVLVVSGM
TGCGKTTQIPQFILDASLSGPADQVANIICTQPRRISAISVAQRVAEERAECLGNSVGYQ
IRLETVRTSATRLLYCTTGVLLRRLEGEAELRDVTHVIVDEVHERTEESDFLLLVLKDLI
IQRPDLKIILMSATLNANLFSEYFYNCPAVHIPGRTFPVDQFFLEDAISKSKYVIEDGSP
YMRSGKQSSFSTSGRGGKADLRDAVDDLSEDVWNFMSLSKKDFVKDSIPDQQLSLQDLTV
RYKDTKKSVLKTMSAMDLDKINMDLVENLLEWIVDGKHNYPLGAVLVFLPGLAEIKMLYE
QLQSNRMFNNRGASRCVVYPLHSTLSNEDQQAVFSRPPEGVTKIIISTNIAETSVTIDDV
VYVIDSGKMKEKRYDASKSMESLEDSWVSRANALQRKGRAGRVASGVCFHLFTSHCFQHQ
LAEQQLPEIQRVPLEQLCLRIKILDVFSERTLESVFSRLIEPPAAGSLDAAKQRLQDLGA
LTADEKLTPLGYHLACLPVDVRIGKLMLFGAIFRCLDPALTIAASLAFKSPFVSPWDKRD
EANEKKLAFAVANSDHLALLQAYKGWCCAAKNGNQAGFLYCRENFLSWRGLQEIASLKRQ
FAELLSDIGFIREGLRARTIERMCSKGTDGVLEATGPEANLNSDNIRLMSAMLCAALYPN
VVQVRAPQGNYKQTSKGAMKMQPKANELRFVTKGDGCVHVHPSSVNYTVRHYNSPYLVYH
EKVKTSRVFIRDCSMVSVYTLVLFGGGQINVELHKGEFVISLDDGWIRFAASSHQVAELV
KELRWELDQLLEDKIRNPSMDLCSCPRGSRIIHMIVHLITTQ
NT seq
4449 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgagtccgtgccgctctgcggtggatacacgattgtttgccgctgtgatgggacg
ctaattgaagagatgaatgcgaggaaaagaggagggaagccgaatagaggaggggggaga
tttaacaagccgagaggaggcggaggtcgaggcggaggcggaggtcgaggaggaggagga
ggtggaagtcggaaaggaggagctggtctctgggatgacggtgatgatttcagcgtggat
tttgcacccctccctcgttccagcagacctggtagaggacgaggtggtggtggtggtgga
ggaggaggtggccatgccggtggtagggatagtggtcggggaagggggggaggtagggat
cgagacagggatcgagaccgggatcgagacagagacagtggaaggaacgggaaaagcagc
ggtaaggctctcccacgatccctggcgagtaccaggatgtgccccaaaccaggggacggc
atcaggccggaagcgagcaacatgcccttgcagaggatcttcatgactaatgaaaaccaa
gaacagctgaaggagctgctgcgggatctccagacgcaggactttgatgagccctacgat
gtatctggttcagattattctgggggggaggaggaggagtttgatgaattggatcaacgt
gacgaaggccagttttgggccactaacgatgagcctgtagagagagcagagagcccagcg
tatgacccagagtctgacgatgagcggcccaccccagaacctgttatctccttattcgct
ataggaaaactctgcaggtatggttttgaccgggagcgcagcaaacaggcgctggagtct
gggggaggcgagttaggggcaactttagagcaactcctccaccaggtgttcagtgagcgc
tacggccagaaagctgtttcccccgaaggcctcggtggggtgccgatggatgagtgcttg
agccagaggcaggaggaagctctggccctcactgccatttacggcgagcgcttcaatgag
cgcatcgccaatgcagtctggacagtcaccctggacctgtcgttcctctcagacaaagct
gccaaaaatgggagagaggctggaagtcgaaagggagggggagctgtaaacatgcgtgac
gtctgcaaattctatatgaaaggtcagggctgccggtttggagacaaatgtaagttcaaa
cacgaattccccactaaagggaggtctgtggctggttcctcagacctggacggcccgagc
cagcccggcttcagcagctactctcctcctgagtatgaactagaggtgcgtttccccaaa
ggaaaccgctacccatttcaggcaccggtcgtcgccttcagcaccaatgacgagtccgtc
ggagccacggggaggctcagtgtcaccgagagactatttggagaagcgctggctgcggct
aagagcagcgaacctgttgtttacactctgacaaccttatgtgaggatgagagcaccatg
aaggaactgttggccgtcagtcatcacaaatacagcacaccgccacctgttgtgacgctt
cctccgccctctcttgccgtagcgaagagtaagagtgtgaggagcactgcctctgaggag
agcactagtaatcacacaaacagcaggaggaccaggagcaaccagagacccatggacttg
aaagaggcagcagacgcagaggagctggatgagagggacgaggacgaggaagaccaggct
gtcccagtcgagaacgagagttacgtcaatctgaggaagaagatggtccataagcacaat
cagaagatcggcaacctgctgcaagaaaacggcaagctgtgccgagagttccagaggaaa
cagtcgtccagacgcttcaggtccatgctggagcagaggaagaacctcccggcttggcaa
gataaagtgaagatcctcgacatgttggaccagtgtcaggtgctggtggtcagtgggatg
actgggtgtggtaagaccactcagattcctcagttcattctggatgcctctctgagtggc
cccgcggatcaggttgccaacatcatctgtacccagccgcgccgcatctccgccatctct
gtggctcagagagtggcggaggagcgtgccgagtgtttgggcaactcggtgggctaccag
atccgcctggagactgtcaggacgtccgccaccaggctgctgtactgcaccacgggcgtg
ttgctgcggcggctggagggcgaggcagaactccgagatgtcacgcacgtcatcgtggat
gaggtgcacgagcggacagaggagagtgacttcctgctgttggtgctcaaggacttaatc
atacaaaggccagacctgaagattattctgatgagtgccacccttaatgccaacctcttc
tccgagtatttctacaactgtcctgccgtgcacataccagggcgtaccttccccgttgac
cagttttttcttgaagatgctattagtaaatccaagtatgtcattgaggatggcagccct
tacatgcgctcagggaaacaaagttcattttctacaagtgggcgaggagggaaagcagac
ctgcgggacgcggtggatgacttgagtgaagacgtctggaacttcatgtctttatccaag
aaggactttgtcaaagactcgatcccggaccagcagctcagcctgcaggacctcacggtc
agatacaaagacactaagaagtccgtgcttaaaaccatgtctgcaatggacctggacaag
atcaacatggacctggtggagaacctgctggagtggatagtcgacggaaaacacaactac
ccactcggtgcagtgctggtgtttttgccgggcctcgctgagatcaagatgctttacgaa
cagctccagtctaacaggatgttcaacaataggggcgcatccaggtgtgtggtgtaccca
ctccactcgacgttatccaatgaggaccagcaagctgttttcagccggcctccggagggc
gtcacgaagatcatcatctccaccaacatcgccgagacctcggtaaccatcgacgacgta
gtttatgtcattgactccggcaagatgaaggagaaaaggtatgacgcatccaagagcatg
gagagcctggaggattcgtgggtttctcgggccaacgcgctgcagaggaagggtcgagcg
ggtcgtgtggcctcgggcgtctgcttccacctcttcaccagccactgcttccaacaccag
ctggctgagcaacagctgcccgagatccagagagtgcctctggagcagctctgcctccga
atcaagatcctggacgtgttctcggagcggacgctggagtcggtcttctctcggctcatc
gagcccccggccgcggggagcctggacgcagccaagcagcgcctgcaggacctgggagct
ctgaccgccgacgagaagctgaccccgctgggctaccacctggcctgcctgcccgtcgac
gtgcgcatcggaaagctcatgctgttcggcgccatcttccgctgcctcgacccggcgctc
accatcgccgccagcctggccttcaaatccccgtttgtgtctccatgggacaagcgagac
gaagccaatgagaagaaactggcctttgctgtggccaatagtgaccatctagctttgctg
caggcgtataagggatggtgctgcgctgcaaagaatggaaaccaggccggcttcctttac
tgcagagagaacttcctgtcttggcgtggtttacaggagatcgccagtctgaagagacag
tttgccgagctgctgtccgacatcggcttcatcagggagggactgcgggccaggactatc
gagcgcatgtgctccaagggcaccgatggagttctggaggccactgggcccgaggcaaac
ctgaactccgataacatccggctgatgtccgccatgctgtgcgccgccctctatcccaac
gtggtccaggtccgagcgcctcaggggaattacaagcagaccagcaaaggagcgatgaag
atgcaacccaaagccaacgagctccgcttcgtgaccaagggcgacggctgtgtccacgtg
cacccgtcgtctgtcaactacacggtccgccactacaacagcccgtacctggtttaccac
gagaaggtgaagacgagccgggtgttcatcagggactgcagcatggtgtcggtctacacg
ctggtgctgttcggaggcggtcagatcaacgtggagctgcacaaaggagagttcgtcatc
tccctggatgatgggtggatccggtttgccgcttcttcacatcaggtggctgagcttgtg
aaggagctgcgctgggagctcgaccagctgctggaggacaaaatcaggaacccaagcatg
gacctgtgcagctgcccgcgtggctcccgcatcatccacatgatcgtccacctcatcacc
acgcagtag
DBGET
integrated database retrieval system
