Embiotoca jacksoni (black perch): 138203028
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Entry
138203028 CDS
T10523
Name
(RefSeq) ATP-dependent RNA helicase DDX19A isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja03013
Nucleocytoplasmic transport
eja03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
138203028
03015 mRNA surveillance pathway
138203028
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eja03019
]
138203028
Enzymes [BR:
eja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
138203028
Messenger RNA biogenesis [BR:
eja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
138203028
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Toprim_2
DUF1028
PP-binding
Motif
Other DBs
NCBI-GeneID:
138203028
NCBI-ProteinID:
XP_069013628
LinkDB
All DBs
Position
Unknown
AA seq
493 aa
AA seq
DB search
MATDSWAQAVDEQEAAAESIGSLQIKEKPEENVLCIAGTAANATESISSAPKSETEGEVK
TTDDDDKDDKAAQSLLNKLIRNNLVNTTNQVEVLQKDPNSPLYSVKSFEELRLKPQLLQG
VYGMGFNRPSKIQETALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVDPNNRYPQCL
CVSPTYELALQTGKVIEQMGKHYPEVRLVYAIRGNKLQRGMKLQEQIVIGTPGTMLDWCS
KFKFIDPKKVMVFVLDEADVMIATQGHQDQSIRIQRMLPKNCQMLLFSATFEETVWNFAQ
RIVPDPNIIKLKREEETLDTIKQYYVLCNSKEEKFQALCNIYGAITIAQAMIFCHTRKTA
GWLAGELSREGHQVALLSGEMQVEQRAAVIDRFRDGKEKVLVTTNVCARGIDVEQVSVVI
NFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAINMVDSRMSMNILNRIQEHFNKKIEKL
DTDDLDEIEKIAS
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggctacagactcgtgggcccaggcagtggacgagcaggaagccgcggcggaatcgatc
ggtagccttcaaataaaagagaaaccagaggaaaatgttttatgtattgcaggcacagct
gcaaatgcaacggaatccatcagttcagctccaaagtctgaaaccgaaggagaagtcaag
acgacagacgatgacgacaaagatgacaaagcggcacagtctttgttgaacaaactgatc
cggaataatctcgtcaatacaactaatcaagtggaagtccttcagaaagatcccaactct
ccgctctactccgtcaagtcctttgaagaattacggctcaaaccgcagctgcttcaggga
gtgtacggtatgggctttaatcggccatccaaaatccaggaaactgccttacctatgatg
ctggctgaacctccacagaatttgattgctcagtcgcagtcaggaacagggaaaacggct
gcttttgtcctggccatgctcagccatgtagaccccaacaacaggtatccccagtgcctg
tgtgtgtcacccacctatgaactggctcttcagactggtaaagtaatcgagcagatgggc
aaacattatcctgaggtcagactagtctacgccatcagaggaaataaattgcagcggggc
atgaaactgcaggaacagatagttattggcacacctggtacgatgctggactggtgcagt
aaattcaagtttatagaccccaagaaggtcatggtgtttgtgctggacgaggccgacgtc
atgatcgccacacagggtcaccaggaccagagcatccgcatccagaggatgttgcctaaa
aactgccagatgttgctgttctccgccacgtttgaggagacggtgtggaactttgctcaa
cgcatcgtgcccgatcccaacatcatcaagctgaagagagaggaggaaacactggacacc
atcaaacagtactacgtgttgtgcaacagcaaagaggagaagttccaggccctctgtaac
atctacggagccatcaccatcgcccaggccatgatcttctgccatacaaggaagactgca
ggctggctggcaggggagctgtcccgggaaggccaccaggtggcgctgctgagcggagaa
atgcaggtggagcagagggctgccgtcattgatcgctttagagatggaaaggagaaggtc
ctggtcaccacaaatgtttgtgctagaggcatcgatgtagagcaggtttctgtggtcatc
aactttgacctgccagtcgacaaggacggtaacccagacaacgagacctacctgcacagg
attggacgcacgggtcgattcgggaaaaggggactggccatcaacatggtggacagcagg
atgagcatgaacatcctcaacaggatccaggagcatttcaataaaaaaattgaaaaacta
gacacagatgatctggatgaaattgagaaaattgccagctaa
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