Embiotoca jacksoni (black perch): 138203170
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Entry
138203170 CDS
T10523
Symbol
ndc1
Name
(RefSeq) nucleoporin NDC1 isoform X1
KO
K14315
nucleoporin NDC1
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja03013
Nucleocytoplasmic transport
Brite
Messenger RNA biogenesis [BR:
eja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
138203170 (ndc1)
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NCBI-GeneID:
138203170
NCBI-ProteinID:
XP_069013966
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Position
Unknown
AA seq
669 aa
AA seq
DB search
MFSTEQSCWFIRKVICWRAAASTAWAVMLLPPTTAVFVLLSRFSLLHPIQSISECLTLLA
SACAIFSFILLCGVILVVGFLNLEYYTVIPTVACSKIALLGQLLHPRQFVNSLAYSITGI
IVAWFCAVTIGFRYETLGHPCTQSDGFPQMCLNEYHLILLLAGAFVGFSHSLLGVMHNMN
YVSFHTAQQYKYLRFKGSLPLVMKCSATQALYSVRNFIVVYFFLGYVPRAWICKTLNLHL
NSSVHPLDSIAGLLDLSLLYHLWISATFLLFTWYITLLLFRIFVTEVYSFPVQSPFTDDD
VHSLSKVLTDKQPMILKFLALQDMALLSQHSPSRRCEVFSLSQPGGHPHNWNAISKECLS
LLADLTQRLVAYHDTVATNGRAKCLSTGSERKLSSETSVTSGTEDLMSPRPAFLMRTPAS
VFARPVVGGPRSPLTAPFTPDPDSPFSSPALRRLTAPVEQCSPWHGAAQSPHIMRRAPKL
WSTATDSQVNGSPPPSPASVPSPKQEPSKPSFLAQFLQNRKDQVKNFLAKRVLIMYLFNK
LPEASSQALFADSQAHIWALEGLSYLVQASFSEDQFGVVQTMLPSILSCMLVLQEAVDRH
FKLPHASSKPARSTSSMADSTYKTLRFAVRAALKTAIYRITTTFGDHLKAVQVSAEHRKR
LQQFLEYKE
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgttttctacagagcaaagttgctggttcatccgcaaggtgatctgctggagagctgca
gccagcactgcttgggctgtcatgttgttgccccccaccacggcagtttttgtcctcctc
agcaggttcagtctcctccaccccatccagtcgatatcggaatgtctcaccctgctggca
agcgcgtgcgccatcttctccttcatactgctgtgcggcgtgatcctcgtggtcggcttc
ctgaacttggagtattacaccgtcattccgaccgtcgcgtgctcgaaaatcgccctgttg
gggcagctgctccacccgcggcagttcgtcaactcgctggcctactccatcacgggaata
atcgtggcctggttttgcgccgtcaccatcggtttccgatacgagactctgggccacccg
tgcacacagagcgatggtttccctcagatgtgtctgaatgagtatcatctcatcctcctg
ctggcgggagccttcgtcggattctctcacagtctgctgggtgtgatgcacaacatgaac
tatgtctccttccacactgctcagcaatacaaataccttcgcttcaagggatcccttcct
ttggtgatgaagtgcagcgccactcaagctctgtactctgtcaggaacttcattgttgtg
tatttctttttgggatacgttccaagagcatggatctgcaaaacactgaatctccatctg
aacagctccgtccaccctctcgacagcatagccggactgctggacctctctctgctctac
cacctgtggatcagcgccaccttcctcctcttcacttggtacatcacactgctgctcttt
aggatctttgtcactgaggtgtacagttttcctgtgcagtcaccttttactgacgatgac
gtccacagtctttccaaagtgcttaccgacaagcagccaatgatattaaagtttctagct
ctgcaggacatggctctgttgtctcaacattctccatcgcgacgctgcgaagtcttcagt
ctgagtcagccaggaggccaccctcataactggaacgccatcagtaaagagtgcctgtcc
ctgctggctgatctgacccagagactcgtagcctatcacgacaccgtagcgaccaacggc
agggccaaatgtctgtccactgggagcgaaaggaagctttcatctgagacatcagtaacc
tcgggcacggaagacctgatgagcccacggcccgcttttctgatgaggaccccagcgtcg
gtcttcgcccgcccggtcgtcggaggcccgcggagcccgctgacggctccgttcactccc
gacccggacagccctttttcttctcctgccctgcggcgtctcactgctccggtggaacag
tgctcgccgtggcacggcgccgcgcagagcccgcacatcatgaggagagcaccgaaactc
tggtccaccgccacagattcccaggtcaacgggagtccccctccgtctccagcctcagtt
cccagccccaaacaggaaccctccaaaccaagttttctggctcagttcctccagaacaga
aaagatcaggttaaaaatttcttggcaaagcgggtgctgataatgtatttgtttaacaag
ctcccagaagcctccagtcaggctctctttgctgacagccaggctcacatctgggctttg
gaaggactgtcttacctcgttcaagcctcgttctcggaggaccagtttggagttgtacaa
actatgttacccagcattctcagctgcatgctagtcttacaagaggccgtcgatcggcac
ttcaagctgccgcacgcctccagcaagccggccaggtcgaccagcagcatggcggactcc
acttacaaaacgctgcgcttcgccgtcagggccgcgctgaagacggccatctaccggata
accaccactttcggagatcacttaaaagccgttcaggtgtccgcggagcaccggaaaaga
ttgcagcagtttctggagtacaaggaataa
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