Embiotoca jacksoni (black perch): 138203315
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Entry
138203315 CDS
T10523
Symbol
lrrc4ba
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja04514
Cell adhesion molecule (CAM) interaction
eja04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
138203315 (lrrc4ba)
04517 IgSF CAM signaling
138203315 (lrrc4ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
eja04515
]
138203315 (lrrc4ba)
Cell adhesion molecules [BR:
eja04515
]
Immunoglobulin superfamily
NGL family
138203315 (lrrc4ba)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_14
LRR_9
ig
V-set
Ig_2
LRRNT
VEGFR1-3_N_Ig-like
Motif
Other DBs
NCBI-GeneID:
138203315
NCBI-ProteinID:
XP_069014167
LinkDB
All DBs
Position
Unknown
AA seq
728 aa
AA seq
DB search
MRIATLTCLPGPSPFLFLLAQLLLRLLLPGPELVGAASSCPSLCTCSNQASRVICTRQNL
EEVPESISINTRYLNLQENSIQVIKSDTFKHLRHLEILQLSKNQIRQIEVGAFNGLPNLN
TLELFDNRLTLVPSHAFEYLSKLRELWLRNNPIETLPGYAFHRVPSLRRLDLGELKKLDF
ISDAAFVGLINLRYLNLGMCGLKDIPKLTALVRLEELELSGNRLEIIRPGSFQGLVSLRK
LWLMHSQVSVIERNAFDDLKSLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWVCNC
DVLWLSWWLKETVPSNTTCCARCHAPPFLKGKYIGELDQSHFTCYAPVIVEPPTDLNVTE
GMAAELKCRTSTSTTSVNWITPNGTLMTHGSYRVRISVLHDGTLNFTNVTLRDTGQYTCM
VTNAAGNTTATAVLNVTAADASVNYTYFTTVTVETVETRGDNDYALVAINETFIRVHPGP
TPSDLWPDGVPTTDSSLAAGWSSSSPRATRPTFTVPITEPGFSGLDDVMKTTKIIIGCFV
AITFMAAVMLVVFYKLRKQHQLHKHHGPARAIEIINVEDELGAGAGGRGSGISGGSTVTQ
SGSSGIGGGQSLRLHHPEIVNLPNLARSEHLNHYYKTHHFNNNMMGLGMGTLNNNNNPSL
CSQSQNISCTQVPSSAGVGAPTCGTLPSPVPLPQLGLHSSLKGLMGKGQNEPLLFKSGSK
ENVQETQI
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgccacgctgacctgcctccccggcccttcccccttcctctttctattggcc
cagctgctactgcggctcctcctccccgggccggagttagtgggagccgcctcctcctgc
ccctccctctgcacctgctccaaccaggccagccgagtcatctgcaccaggcagaacctg
gaggaggtgccggaaagcatatcaatcaacacgcgatacctcaacctgcaggagaactcc
atacaggttatcaagtccgacaccttcaagcacttgaggcacctcgaaatcctgcagctc
tctaagaatcagatacgccagattgaagtcggagcgttcaatggcctccccaacctcaac
acgctggagctcttcgacaaccgcctcacactggtgccatcacatgccttcgagtacctc
agcaagctgcgggagctgtggctgcgcaacaaccccatcgagactctgcccggctatgcc
ttccaccgcgtgccctcgctgcgtcgcctggacctgggtgagctcaagaagctggatttc
atctccgacgcggccttcgtgggcctcatcaatctgcggtacctgaacctgggcatgtgc
gggctgaaagacattcccaagctgacggccctcgttcgtttggaggagctggagctgtcg
ggaaaccgactggagatcatccgccccggctccttccagggcctggtgtcccttcgcaag
ctgtggctcatgcactcgcaggtgtccgtcatcgagcgcaacgccttcgacgacctgaag
agcctggaggagctcaacctgtcccataactccctgcactccctgccccacgatctcttc
acgccgcttcaccagctggagcgggtgcacctcaaccacaacccctgggtctgcaactgc
gacgtgctttggctcagctggtggttgaaagagacggtgcccagcaacaccacctgctgc
gcccgctgccacgctccgccgttcttaaagggcaagtacatcggcgagctcgaccagagc
cacttcacctgctacgcgcccgtcatcgtggagccgccgacggacctcaatgtcaccgag
ggcatggccgccgagctgaagtgtcgcacgagcacgtccacgacgtcggtcaactggatc
accccgaacggcaccctcatgacccacggctcgtaccgggttcggatctccgtcctgcac
gacggcacgctcaacttcacgaatgtcaccctgcgagacacgggccagtacacctgcatg
gtcaccaacgccgccggcaacaccacggcgaccgccgtcctcaacgttactgccgcggac
gccagtgtcaactacacctacttcacgacagttaccgtggagaccgtggagaccagagga
gataacgactacgcgctggtcgccatcaacgagaccttcatccgcgttcacccgggcccg
actccctccgacttgtggccggacggcgttcccaccacggactcctctctggctgccggc
tggtcctcctcatcccctcgggccactcgacccaccttcactgtgcccatcaccgagccg
ggcttctcgggcctggacgacgtgatgaagaccaccaagatcatcatcggctgcttcgta
gccatcaccttcatggcggcggtgatgctggtggtcttctacaagctgaggaagcagcac
cagctgcacaaacaccacggccccgctcgcgccatcgagatcatcaacgtggaggacgag
ctgggcgccggggccggcggccgggggagcggcatctcggggggctcgaccgtgacgcag
agcgggagcagtggaataggcggggggcagagcctccggctgcaccaccccgagatagtc
aacctgcccaacctggctcggtcggagcacctcaaccactactacaaaacccaccacttc
aacaacaacatgatgggcctgggcatgggcaccctcaacaacaacaacaacccgtcgctg
tgctcgcagtcacagaacatatcgtgcacccaggtcccgagctccgccggcgtgggggcg
cccacgtgcggcaccctgccctccccggtgccgctgccccagctggggctccacagttcc
ctgaagggcctcatggggaaaggccagaacgaaccgctgctttttaagagcggctcgaag
gaaaacgtgcaagagactcaaatctga
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integrated database retrieval system
