Embiotoca jacksoni (black perch): 138203474
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Entry
138203474 CDS
T10523
Symbol
ddx1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
eja Embiotoca jacksoni (black perch)
Brite
Enzymes [BR:
eja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
138203474 (ddx1)
Spliceosome [BR:
eja03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
138203474 (ddx1)
Transfer RNA biogenesis [BR:
eja03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
138203474 (ddx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
138203474
NCBI-ProteinID:
XP_069014457
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Position
Unknown
AA seq
740 aa
AA seq
DB search
MAAFSEMGVMAEIAQAVEELDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGRASVKTGGAIFNNWQMNPYDRGTAFAIGPDGLCCQSREFKEWH
GCRSTKGVTKGKYYYEVACHDQGLCRVGWSTSQAALDLGTDKYGFGFGGTGKKSNNKQFD
SYGEEFTMHDTIGCYLDVDKGQISFSKNGNDLGVAFEIPQNLKNQSFFASCVLKNAELKF
NFGGEDFKHPPKSGFVALDKATEDHTVKSSETGSAKVSQVKVSSNAPKALIIEPSKELAE
QTLNNVKQCKKYVDNPKLRELLVIGGVPAKEQLAALEQGTDIVVGTPGRLDDLISTGKLS
LSQVRFLVLDECDGLLSAGYTDFINRIHNQIPQVTSDGKRLQIIVCSATLHSFDVKKLSE
RIMHFPTWVDLKGEDSVPESVHHVVVPVNPKNDRLWERLGKSHIRTDEVHAKDNTRPGAN
SAEMWSEAIKMLKGEYTVKAIKEHKMDQAIIFCRTKIDCDNMEQYFIQQGGGPDSKGHQF
SCVCLHGDRKPNERKTNLERFKKKEVRLLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVAMEKEKVWYHVCPNRGRGCYNTRLKEDGGCTIWYNEKELLS
DVEEHLKCTITQCEPDIKVPVDEFDGKVTYGRRRALGGGNYKGHVDALAPTVQELAVLET
EAQTAFLHLGYMPNQLFRAF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgttttctgaaatgggagtcatggctgaaatagcgcaggctgtggaggagctg
gactggttactacccactgacatccaggcagagtctatcccccttatccttggtggagga
gacgtgcttatggcagcagaaactggaagtggcaaaacgggagccttcagtatcccagtg
atccagattgtgtacgagaccctgaaggatcaacaggagggcaagaagggcagagcctct
gtcaaaactggaggagccattttcaacaactggcagatgaatccttatgatcgcggtaca
gccttcgcgatcggtcctgatggactgtgctgccagagcagagagttcaaagagtggcat
ggctgtcgctccacaaaaggtgtcaccaaagggaagtactactatgaggtggcctgccat
gaccagggtctgtgccgtgtgggctggtccaccagtcaggcagctctggacttgggaact
gataagtatggttttggttttggtggcactggaaagaaatccaacaacaagcagtttgac
agctacggagaggagttcaccatgcatgacactattggatgctacttggatgtagacaag
ggccaaatttccttctctaaaaatggtaatgacctgggtgtggcttttgagatccctcaa
aacctgaagaatcagtctttcttcgcctcctgtgtgctgaagaatgcagagctgaagttc
aactttggaggagaggactttaaacatccccccaagagtggttttgttgccctggacaag
gcaacagaggatcacacagtcaaatcctctgagacaggaagtgccaaagtgagtcaggtg
aaagtgtcatccaacgcccccaaagctctgatcatcgagccatcgaaggaactggctgaa
caaaccctcaacaatgtcaagcaatgcaagaaatatgtggataaccccaaactcagggaa
ctcctggtgatcggtggtgtgcctgccaaagagcagctggctgctctggaacaggggact
gacatcgtggtgggaacacccggcagactggacgatctcatatccaccgggaaactcagt
ctgtcccaagtccgcttcctggtgctggatgagtgtgatggcctcctgtcagccggatat
acagacttcatcaataggatccataaccaaatccctcaggtcacctctgatggcaagaga
ctgcagatcattgtgtgttcagccacactgcattcatttgacgtgaagaagttgtccgag
cgcatcatgcacttccctacttgggtggacctgaagggggaggactctgttccagagagt
gtccaccacgtggttgtgcccgtcaatccgaagaacgaccgtctgtgggagcgcctgggc
aagagccacatccggactgacgaggttcatgccaaagataacaccagaccaggagccaac
tctgcagagatgtggtcagaagccatcaagatgctgaagggcgagtacaccgtgaaggcc
attaaagagcacaaaatggaccaggctataatcttctgtcgcaccaagatcgactgcgac
aacatggagcagtacttcattcagcaaggaggaggtccggacagtaaaggtcaccagttt
tcctgcgtttgtctccatggtgatcgaaagcctaatgagcggaagactaacttggagcgc
ttcaagaaaaaagaagtgagactcttgatctgcactgacgtagctgccagaggaattgac
atccacggagttccttacgtgattaatgtcaccctgccagatgagaagcagaactatgtc
catcgtatcggcagagttggaagagccgagagaatgggactggccatctccttggttgct
atggaaaaagagaaggtgtggtaccatgtttgcccgaaccgaggcagaggctgctacaac
acccggctgaaggaggatggaggttgcaccatctggtacaatgagaaagagctcctgtcg
gacgttgaggagcatctaaagtgcaccatcacccagtgtgagccagatatcaaagtgcct
gtggatgagtttgatggaaaggtgacctacggaaggcgcagggcgttgggaggtggtaac
tacaagggtcacgtggatgctcttgccccgacagtccaggaactggccgtcctcgagaca
gaagcccaaacggctttccttcacctgggatacatgccaaaccaacttttcagagctttc
tga
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