Embiotoca jacksoni (black perch): 138203538
Help
Entry
138203538 CDS
T10523
Symbol
vps18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja04140
Autophagy - animal
eja04148
Efferocytosis
eja05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
138203538 (vps18)
04148 Efferocytosis
138203538 (vps18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
138203538 (vps18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
eja04131
]
138203538 (vps18)
Membrane trafficking [BR:
eja04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
138203538 (vps18)
Hops complex
138203538 (vps18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-RING_16
zf-C3HC4_2
zf_RING_Vps8
zf-RING_Vps41
zf-RING_5
zf-RING_UBOX
zf-RING_2
DUF1664
zf-RING_11
zf-ANAPC11
DUF5600
zf-C3H2C3
Apolipoprotein
zf-rbx1
KNOX2
zf-C3HC4
Sec8_N
zf-C4H2
Motif
Other DBs
NCBI-GeneID:
138203538
NCBI-ProteinID:
XP_069014593
LinkDB
All DBs
Position
Unknown
AA seq
982 aa
AA seq
DB search
MASILDEYEDSQNIRQSAQQHGRLTNANIGITHSGFVNVRLEEEKPIFNKQRIDFTPPEK
INHLAVCNNQLCMSLGKDTLLRIDLAKPDQPNQTELGRKDDSKVHRLFLDPTGSHLLISL
STSECLYLNRNTQKVRSLSRWRGHLIESVGWNKLLGNETSTGPVLVGTSQGIIFEAEISA
TEGSLFNTNPDQYFRQVHFLEEDGRPAPVCCLEIERGLENKYFIIATTRKRLFQFVGKVA
EGSEQQGFSTIFNQNQDLLPSFQEFPANMGYSEITFYTSKLRTSPKAFAWMMGNGVLYGQ
LDYVRPDSLLSDVQVWEYTPDIDLSIIKPISIVLTQFHFLLLLHDRVKAICTLNGQVVYE
DVFPDKFGTLKKMIKDPVGGLVWIYTERAVFRYHIQREARDVWQMYMSMNKFDLAKEYCR
DRPECTDMVLAKEAEHCFQNKRYLESAKCYALTQNYFEEIALKFIEAKQEEALKEFLLKK
LYNLKPSERTQITLLVTWLAELYLNRLGQLESDGNSIIFQETRDEFRRFISSSKHKECLF
NNRTTIYDLLASHGNVDDMVYFSVVMQDYERVISHYCQHDNYSAALDVLSKHCDEKLFYK
FSPVLMQHIPKNVVDAWIQMGKRLDPKKLIPALMNYSQMGSTQQISETIRYMEFCVYELT
VTEEAIHNYLLSLYAKYKPDSLLWYLEQAGTHASEIHYDLKYALRLCAEHGYLRACVLVY
RIMELYEEAVDLALQVDVDLAKSCADLPEDDEEMRKKLWLKIARHVVQEEKDVKKAMNCL
SSCDLLKIEDILPFFPDFVTIDHFKEAICSSLEEYNQHIEELKQEMEEATESAKRIREDI
QEMRNKYGVVDSQEKCAACDFPLLNRPFYLFLCGHMFHSDCLFQEVSPHLSTYKQSRLEE
LQKKLAATTQSSKSRHRPALKDEGDTSSLGKGNAGTSREQIKSDIDDTIASECVYCGELM
IKSIDKPFIDPQKFEDERSSWL
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaattcttgatgagtacgaggactctcaaaacatccggcagagtgcgcagcag
cacggccgcctgacaaacgccaacatcgggataacgcattcaggctttgtgaacgtgaga
cttgaggaagagaaaccgatattcaacaagcagaggatcgatttcacgccgcccgagaag
atcaaccatctggcggtctgcaacaaccagctctgcatgagtctggggaaggacacgctg
ctgaggattgacttggccaagccggatcaacccaaccagactgaattaggaaggaaagat
gacagtaaagtgcacagactgttcttggaccctacaggctcccatctgctgatcagcctg
agcaccagtgagtgtctgtacctcaacagaaacacccagaaggtgcgcagtctgtcccgc
tggaggggccacctcatcgagagcgtgggctggaacaagctgctgggtaatgagaccagc
acgggacccgtcctggtcggcaccagtcagggcatcatcttcgaagcagagatctctgca
actgagggcagcttgttcaacaccaatccagatcaatacttcagacaggttcacttcctg
gaggaggatggcaggcctgcacctgtatgctgcctggagattgagcggggccttgagaac
aagtacttcatcatcgccaccactcgaaaacgcctgttccagtttgttggtaaggtagcc
gagggctcggagcagcaaggcttcagtactatcttcaaccagaaccaggacctgctgccc
agtttccaggagttccccgccaacatgggatacagcgagatcaccttctacacctcgaag
cttcggacctcccccaaggccttcgcctggatgatgggtaacggggttctttatggtcag
ctggactacgtcaggcctgattccctgctgagtgatgtgcaggtatgggaatacactccc
gacattgacctcagcatcatcaagcccatctccattgtgctgacacagttccacttcctg
ctactgcttcatgaccgagtcaaggccatctgcactctgaatggacaggtggtttatgag
gatgtgttcccagataagtttggcacccttaagaaaatgatcaaagacccagtcggtggg
ttggtgtggatctacaccgagcgggcagttttccgataccacatccagcgcgaggccagg
gacgtctggcagatgtacatgagcatgaataaatttgatctggccaaggagtactgccgt
gaccggcctgagtgcacagacatggtgctggccaaggaggccgagcactgcttccagaat
aagcgatacctggagagtgccaagtgctacgcgctcacacagaactattttgaagagata
gcgctcaagttcatcgaagccaaacaagaggaggccttgaaggagttcttgctgaagaaa
ctatataatctgaaaccgagtgagagaacacagatcacccttctagtcacctggctcgca
gaactctacttgaaccgtctcggccagctggagagcgacggcaacagcatcatcttccag
gaaacccgcgacgagttccgccggttcatcagcagctccaagcacaaggagtgtctgttc
aacaaccgcaccaccatctacgacctgctggccagccacggcaacgtggacgacatggtt
tacttctcggttgtcatgcaggactacgagagggtgatatctcactactgccagcacgac
aactacagcgccgctttggacgtgctctccaagcactgcgacgaaaagctgttttacaag
ttctcccccgtcctcatgcagcacattcccaaaaacgtggttgatgcctggattcagatg
ggcaaaaggctggacccaaagaagctcatcccggctctgatgaactacagccagatgggc
agcacccagcagattagcgaaaccatccgctacatggagttctgtgtgtatgagctgacc
gtgacagaggaggccatccataactacctgctgtcgctttacgccaagtacaagccagac
tctctgctgtggtatctggagcaggcaggtacgcacgcctcagagatccactacgacctc
aagtacgccctccggctgtgtgcagagcacggctacctccgggcctgcgtcctggtttac
aggattatggaactgtacgaggaggcagtggatctcgctttacaagtcgatgtggactta
gccaagtcatgcgctgacctgcccgaggatgacgaggagatgaggaaaaagctgtggctg
aagatcgccaggcatgtggtgcaggaggagaaagatgtgaagaaagccatgaactgtctg
tccagctgcgacctgctcaagatcgaagacattctgcctttctttcccgactttgtcacc
attgaccactttaaggaggccatctgcagttctctggaggagtacaaccagcacattgag
gagctgaagcaggaaatggaggaggccacggagagtgctaaacgtatcagggaagacatc
caggagatgaggaacaagtatggtgtagtggactcccaagaaaagtgtgcagcttgtgac
ttcccgctgctcaacaggcctttctacctgttcctgtgtggacacatgttccactctgac
tgcctgtttcaggaagtgagccctcacttatcaacctacaagcagagtcgtttggaggag
ctgcagaaaaagctggctgcaaccacgcaatcctccaaatcccgccaccgtcccgcacta
aaagatgaaggagacacgtcgagccttggaaagggcaatgctggtacaagccgcgagcaa
atcaaatcagacatcgatgacaccattgcatctgagtgcgtgtactgtggcgaactgatg
atcaaatccatcgacaagcctttcatcgacccgcagaaatttgaggacgagagatccagc
tggctatga
DBGET
integrated database retrieval system
