Embiotoca jacksoni (black perch): 138203558
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Entry
138203558 CDS
T10523
Symbol
prpf39
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
eja Embiotoca jacksoni (black perch)
Brite
Spliceosome [BR:
eja03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
138203558 (prpf39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
TPR_16
TPR_MalT
TPR_12
TPR_10
TPR_15
ARM_TT21_5th
Focal_AT
Motif
Other DBs
NCBI-GeneID:
138203558
NCBI-ProteinID:
XP_069014619
LinkDB
All DBs
Position
Unknown
AA seq
794 aa
AA seq
DB search
MEDTDDTITGMLDTESPAMESNGDAFIPNLPVLGQAADWSLDQVAPEPLSNILPEDSDAS
QEAPEQEQQPTQQMMSTELGSVEKAVEQFQIASAQLFQEEHPPPPPPPPPPAQPPEEAEQ
VAEPTEMEQESQEMSVEPEAAVPDGSQDGTEAPQVAQDGMELEEPSKEITQESDVPTEPE
LPSEFEKLFKGCEDNPEDFNSWVYLLQYVEQENVLTAVRKAFDIFLMRYPYCYGYWKKYA
DIEKKHGNVQVAEEVYRRGLQAIPLSVDLWLHYLAFIKENSDLSDPETEGRIRTSYEHAV
VAAGTDFRSDRLWESFINWETEQQKLANVTAIYDRILGIPTQLYSQHFQRFKDHVQSNNP
KHFLSEEEFVQMRIELSKSSLSAMVGEDGEATAAQEELPPGTEDLPDPAKRVTEIENMRH
KVIEGRQEVLNHNEHEVSKRWAFEEGIKRPYFHVKALEKPQLNNWKEYLDFEIENGTPER
VFVLFERCLIACALYEEFWIKYAKYLEGYSTEGVRHVYKKACTMHLPKKPTIHLLWAAFE
EQQGNVEEARSILKSLEEAVSGLAMVRLRRVSLERRHGNLDEAEALLREAMESSKNATET
SFYAVKLARQMMKVQRSLSKAKKVLLDAIEKDEYLWLLQTSPKLYLNLLELEYSGDVIQN
EAEILACFDRALKSPMPLEARLLFSQRKVEFLEDFGSDINVLVAAYEEQQKLQKESEPTK
RKAENGYDSSQEPDAKKQRVDDGSAGAANTMTDMQANNYNYNWYQQQYGGWGQNSWGQYN
QYAQYNQYYPPPPT
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggaagatactgacgacaccattactggaatgctggacacagagtcccctgccatggag
agcaacggggatgcctttattcctaaccttcctgttctcggccaagcggctgactggtcc
ctggaccaggttgctccagagccactctccaacatcctgcccgaggactcggatgcgtcg
caggaagctccggagcaagagcagcaaccgactcagcagatgatgtccaccgagctggga
tctgtagagaaggctgtggagcagtttcagattgccagtgctcagctcttccaggaagag
cacccgccgccaccaccaccaccacctcctccagcacagcccccagaagaggcagaacaa
gtagcagagcctacagagatggagcaagagagccaggagatgagtgtagagccagaagct
gctgtaccggatggcagtcaagatgggaccgaggctccacaggtggcacaggatggcatg
gagctggaagaaccatccaaagaaataacacaagaatcggatgttcctacagagccagag
ctgccctcagagtttgaaaaactcttcaaaggatgtgaggacaacccagaagacttcaac
agctgggtctacctgctgcagtatgtggagcaagagaatgtccttacagctgtgaggaag
gcatttgatatattcctgatgcgctatccttactgctatggctactggaagaagtacgca
gatattgagaagaagcacgggaatgtacaggttgcagaagaggtgtacagaagaggcttg
caggccatccctctcagcgtggacctgtggctgcactacctggccttcatcaaagagaac
tcggatctcagtgacccagagacagagggacgcattcgaacttcctacgaacacgcagtg
gttgcggcaggcacagactttcgctcagaccgtctgtgggagtccttcataaactgggag
acggagcagcagaagttggccaacgtcaccgccatctatgatcgcatcttgggcatccca
acgcagctgtattcccagcacttccagaggttcaaggatcatgtgcagagcaacaacccc
aaacatttcttgtcagaagaggagtttgttcagatgaggatcgagctctccaaatccagc
ctatcggcaatggtcggggaggatggagaggcgactgctgctcaggaggagctgccaccc
ggtacagaggatcttccggatccagccaagagagtgacagagatcgagaacatgcggcac
aaggtgatcgagggtcgtcaggaagtgctcaaccacaatgaacacgaagtcagcaagcgc
tgggcctttgaggaggggatcaagagaccatacttccacgtaaaggccttagagaagcca
cagctgaacaactggaaggagtacctggactttgaaattgaaaatgggacaccggagcgt
gtgtttgttctttttgaacggtgcctcatcgcttgtgcgctctacgaggagttctggatc
aagtatgcaaaatatctagagggctacagcactgagggggtgagacacgtctacaagaag
gcgtgtaccatgcatctgcccaagaaaccgaccatccacctgctgtgggcagcctttgag
gagcagcaaggcaacgtagaggaggctcgcagcatcctgaagtccctggaggaagcagtc
tcgggtctggccatggtgcgccttcggagggtcagtctggagcgtcgccacggtaacttg
gatgaagctgaggcactgttgagggaggccatggagtcatcgaagaatgcgactgagact
tcgttctatgctgtgaagctggccaggcagatgatgaaggtgcagagaagtctgagcaaa
gccaagaaggtgctgctggatgccatagaaaaagacgagtatctgtggcttttacagacg
agtcccaaactgtatctaaacctgctggagctggaatacagcggagatgtgatccagaat
gaggctgagatcttggcttgtttcgaccgagccctgaagagcccgatgcctctggaagcc
cgcctgctcttctcccagcgcaaggtcgagtttctggaagactttggcagtgacatcaat
gtgcttgtcgctgcgtatgaggagcaacagaaactacagaaagaaagcgaaccgacgaag
aggaaagccgagaacgggtatgacagctctcaggaacctgacgccaagaaacagcgtgtg
gacgacggctctgctggtgcagcaaacacaatgacggacatgcaggcaaacaactacaac
tacaactggtaccagcaacaatatggcggctggggtcaaaattcctgggggcagtacaac
cagtatgcccagtataaccagtactaccctcctcctcctacatga
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