Embiotoca jacksoni (black perch): 138204230
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Entry
138204230 CDS
T10523
Symbol
drosha
Name
(RefSeq) LOW QUALITY PROTEIN: ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
138204230 (drosha)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eja03019
]
138204230 (drosha)
03009 Ribosome biogenesis [BR:
eja03009
]
138204230 (drosha)
03036 Chromosome and associated proteins [BR:
eja03036
]
138204230 (drosha)
Enzymes [BR:
eja01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
138204230 (drosha)
Messenger RNA biogenesis [BR:
eja03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
138204230 (drosha)
Ribosome biogenesis [BR:
eja03009
]
Eukaryotic type
90S particles
RNase
138204230 (drosha)
Prokaryotic type
rRNA processing factors
138204230 (drosha)
Chromosome and associated proteins [BR:
eja03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
138204230 (drosha)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helical_CED_Drosha
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
DSRM_MRPL44
Cro
Motif
Other DBs
NCBI-GeneID:
138204230
NCBI-ProteinID:
XP_069015450
LinkDB
All DBs
Position
Unknown
AA seq
1356 aa
AA seq
DB search
MSFHQDRGGPRGGMPSGQQGAAPNYRPANLRPPPPQPPLPPYHYDPQAPPSSGYHGNSGY
MPPRSDFMQYPPLASSQTQPSSLNQCPVRPPFSKPPARQGFPDPPPNFPPPPLPGSAGGP
SPGGQVSAQSAYHPYMMPPVPPPPMPHPTMPPPMASQSMGYHPPYSMSYPHPPHPPPFPP
PAFSPGYAQSPGPFQPDHGVRHGGQYKQEKAADGRRSPDRGYRHDELRQKCYGYGGHGDR
HKTEFPGERKERTRSPDRRGRPEAGRYRSEYDRGRTPPRHRSRDRSRERYRHRDSRRSQS
PDRHRKRPRSRSGSRDRKRGRWEEEKDRRSEGSSGPSRERSYPSSVRSRDSEEAFGDRDR
DRERERERERERDRDREKGDEEREEDELLKPAWIRCTHAESFYSNDPMDQVGDSTVVGTS
KLRDLYERFEEELGRRQEQAKEARPKWEPPKTKLDEDPDESSSESDCESDGEGSSCSSTS
DSEVFDVIAEIKRKKAHPDRLHEELWYNDPGQMNDGPLCKCSAKARRTGIRHSIYPGEEP
VKQCRTMNNNSGKLFHYRITVSPPTNFLTDRPTVIEYDDHEYLFEGFSLFSHMPLTSIPL
CRVIRFNIDYTIHFIEEMTPENYCVRGLELFASYLFQDVLELYDWNLAGPDPDSETSGCQ
RFHFMPRFVRFLPDGGKEVLSMHQVLLYLLRSSKPLVPEEEIADMLQWEELEWQKYAEEC
KGMIVTNPGMKPSSVRIDQLDREQFNPDVITFPIIVHFGIRPAQLSYAGDPQYQKLWKSY
VKLRHLLANSPKVKQIDKQKLTQREEALQKIRQKNTMRREVTVELSSQGFWKTGIRSDVC
QHAMMLPVLTHHIRYHQCLMHLDELIGYVFKERCLLQLAMTHPSHHLNFGMNPDHARNSL
SNCGIRQPKYGDRKVHHMYMRKKGINTLINIMSRLGQDDPSPSRINHNERLEFLGDAVVE
FLTSVHLYYLFPCLEEGGLATYRTAIVQNQHLAMLAKKLELDRFMLYAHGPDLCRESDLR
HAMANCFEALIGAVYLEGGLDEARQLFGRLLFNTEDMREVWLNYPPHPLQVQEPQTDRQL
IETSPVLQKLTSFEDAIGVLFTHVRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLV
ATEYLFIHFPDHHEGHLTLLRSSLVNNRTQAKVAEELGMQEFAITNDKTKRPVALRTKTL
ADLLESFIAALYIDKDLEFVHTFMNVCFFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGK
EPDIPLYKTLQTVGPSHARTYTVAVYFKGERIGCGKGPSIQQAEMGAAMDALEKYNFPQM
AHQKRFIERKYRQELKEMRRERERQEKTDEVEEGRK
NT seq
4071 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccatcaggaccgggggggtccacggggaggaatgccctccggccagcagggc
gcggctccgaactaccgccccgccaacctgaggccgccccctccccagcccccgcttccc
ccctaccactacgacccgcaggctcctcccagctccgggtaccacggcaacagcggctac
atgcccccgcgctccgacttcatgcagtaccctcctctggcatcgtcccagacccagccg
agctctctgaaccagtgccccgtgcgccccccgttctccaagccccccgcccgccagggc
ttccccgacccccctcctaacttccccccccctcccctccccggctccgcgggcggaccc
tctccggggggccaggtgtccgctcagagcgcctaccacccttacatgatgcctccggtg
ccgccgccgccgatgccccacccgaccatgccccccccgatggcctctcagtcgatgggc
taccaccctccgtactccatgagctacccgcaccccccacaccccccgcctttccctccg
cccgccttcagccccggctacgcccagagccccggcccgttccagccggaccacggcgtc
cgccacggcgggcagtacaagcaggagaaggccgcggacggcaggaggtcccccgaccgc
ggctatcgccacgacgagctgcggcagaagtgctacggctacggcggccacggcgaccgg
cacaagacggagttccccggagagaggaaggagcgcacgcggagtccggacagacgcggc
aggccggaggcgggccggtaccggtcggagtacgaccgaggccggacgcccccccgacac
cggagccgggaccgcagcagagagcgttaccgacaccgagacagccggaggtcccagtcg
cccgacagacaccgaaagaggcctcgaagtcgctccggcagcagagacaggaagcgcggc
cgctgggaggaggagaaggaccggcggtcggagggctcgtcggggccgagcagagagcgc
agctacccgtcctccgtcaggagcagagactccgaggaggccttcggcgaccgcgaccgg
gaccgggagagggagagagagagggagagagagagggaccgagacagggagaagggcgac
gaagagcgagaggaggacgagctgctgaaacccgcctggatccgctgcacccacgcggag
agcttctactccaacgaccccatggaccaagtgggagactccaccgtcgtggggaccagc
aagctgcgcgacctgtacgagcgcttcgaggaggagctgggacgccgacaggagcaagcc
aaggaggcgcgacccaagtgggagccgccaaaaaccaaactggacgaggacccagacgag
agcagcagtgaatcggactgcgagtcggacggcgaaggaagcagctgctccagcacctcc
gactccgaggtgttcgacgtcatcgccgagatcaagaggaagaaggctcaccccgaccgg
ctgcacgaggagctgtggtacaacgaccccggacagatgaatgatggccccttgtgtaag
tgcagtgccaaggccagacgtacagggatccgccacagcatctacccgggggaggagccg
gtgaaacagtgtcgtacgatgaacaacaactcggggaagctgttccactacaggatcacc
gtgtctccgcccaccaacttcctgaccgaccggccgaccgtcatcgagtacgacgaccac
gagtacctgttcgaaggcttctccctcttctcccacatgcctctcacgagcattccattg
tgccgtgtgatccgcttcaacatagattacaccattcacttcatagaggagatgacaccg
gagaactactgcgtgcgaggcctggagctgttcgcctcctacctgttccaggacgtcctg
gagctgtacgactggaacctggcaggtcccgaccccgacagcgaaacctctgggtgtcag
cgcttccacttcatgccccgattcgtccgattcctacctgacggagggaaggaggtgctg
tcgatgcaccaggtgctgctctacctgctccgcagcagcaagccgctggtccccgaggag
gagatcgcagacatgctgcagtgggaggagctggagtggcagaaatacgccgaggagtgc
aagggcatgatcgtcactaacccgggcatgaaaccgagctcggtgcgcatcgaccaactg
gaccgggagcagttcaacccggacgtcatcaccttccccatcatcgtgcacttcgggatc
cggcccgctcagctcagctacgccggagaccctcagtaccagaagctatggaagagctac
gtgaaactacgccacctgctggccaacagccccaaggtcaagcagatcgacaagcagaag
ctgacgcagagagaggaagcccttcagaagatccgtcagaagaacacgatgcgccgcgag
gtgacggtggagctcagcagtcagggcttctggaagaccggcatccgctctgacgtctgt
cagcacgccatgatgctccccgtcctcacccatcacatccggtaccaccagtgtctcatg
cacctggacgagctcatcggctacgtcttcaaggaacgctgcctccttcagctggccatg
acgcacccgagtcaccacctcaacttcggtatgaaccccgatcacgcccgcaactcgctg
tccaactgcggcatccgccagcccaagtacggcgacaggaaggtgcaccacatgtacatg
aggaagaaaggaatcaacacgttgattaacatcatgtctcgtctcggtcaggatgacccc
tccccctccaggatcaatcacaacgagcgactggagttcctgggcgatgccgttgtcgag
ttcctcaccagcgtccacctatactacctcttcccctgcttggaggagggcggcctggcc
acctacagaacagccatcgtgcagaaccagcacctggccatgctcgccaagaagctggag
ttagatcgcttcatgctctacgctcacggaccggatctgtgccgggagtcggacctgcga
cacgccatggccaactgcttcgaggctcttataggggctgtgtacttggaaggaggcttg
gacgaggcccggcagctctttggtagactgcttttcaacaccgaggacatgcgggaggtc
tggctgaactaccccccccaccccctgcaggtccaggagcctcagacggacaggcagctg
atcgagacgtcccccgtcctccagaagctgaccagcttcgaggacgccatcggcgtcctg
ttcacgcacgtgcgtctgctggcccgagctttcaccctgaggacggtgggcttcaaccac
ctcaccctgggccacaaccagaggatggagttcctgggagactccatcatgcagctggtg
gccaccgagtacctcttcatccacttccccgaccaccacgaaggacatttaaccctcctc
cgcagttcgctggtgaacaaccgcacgcaggccaaagtggcggaggagctgggcatgcag
gagttcgccatcaccaacgacaaaaccaagcggccggtggctctgcggaccaaaactctg
gccgacctgttggagtccttcatcgcagccctctacattgataaagacctggagttcgtg
cacaccttcatgaacgtctgcttcttcccgcggctgaaggagttcattctgaaccaggac
tggaacgacccgaagtctcagctgcagcagtgctgcttgaccctgagaacggagggcaag
gagcccgatatcccgctgtacaagaccctgcagacggtcgggccgtcgcacgcccgaacg
tacaccgtcgccgtctacttcaagggggagcggatcggctgcggcaaaggcccaagcatc
caacaggcggaaatgggagctgcgatggatgcgctcgagaaatataacttcccacagatg
gctcatcagaagcgcttcatcgagcggaaatacagacaggagctgaaggagatgagacga
gagcgggagaggcaggagaagaccgacgaggtggaggaaggcaggaagtga
DBGET
integrated database retrieval system
