Embiotoca jacksoni (black perch): 138204239
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Entry
138204239 CDS
T10523
Symbol
lsm5
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja03018
RNA degradation
eja03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138204239 (lsm5)
09123 Folding, sorting and degradation
03018 RNA degradation
138204239 (lsm5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eja03019
]
138204239 (lsm5)
03041 Spliceosome [BR:
eja03041
]
138204239 (lsm5)
Messenger RNA biogenesis [BR:
eja03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
138204239 (lsm5)
mRNA degradation factors
5'-3' decay
Lsm complex
138204239 (lsm5)
Spliceosome [BR:
eja03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
138204239 (lsm5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
138204239
NCBI-ProteinID:
XP_069015461
LinkDB
All DBs
Position
Unknown
AA seq
91 aa
AA seq
DB search
MAAAPTTNPSQLLPLELVDKCIGSRIHIVMKTDKEIVGTLLGFDDFVNMVLEDVTEFEIT
PEGRRITKLDQILLNGNNITMLIPGGEGPEV
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgctccaacgacaaacccgtcacagctgcttccactcgagctcgtggacaaa
tgcatcggctctcgaattcacatcgtcatgaaaaccgataaagaaatcgtcggcaccctg
ctggggttcgacgactttgtcaacatggtcctggaggatgtgacagaatttgaaatcaca
ccagagggaagaaggataaccaaactggaccagatcctcctcaacggcaacaacatcact
atgctcatccccggtggagaaggaccagaagtttaa
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integrated database retrieval system
