Embiotoca jacksoni (black perch): 138204316
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Entry
138204316 CDS
T10523
Symbol
trpc1
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
eja Embiotoca jacksoni (black perch)
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
eja04040
]
138204316 (trpc1)
Ion channels [BR:
eja04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
138204316 (trpc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
MTR4-like_stalk
LHD_TRPY1
TALPID3
Motif
Other DBs
NCBI-GeneID:
138204316
NCBI-ProteinID:
XP_069015568
LinkDB
All DBs
Position
Unknown
AA seq
796 aa
AA seq
DB search
MHISVCPYSLSVVMAALYQGTDASSPDKFLALKDVREVKEETTLDEKLFLLACEKGDYYM
VKKLLEENRHGELNVNCVDVLGRDAVTIAIENENLDILQLLLEHGCQATDALLVAIDSEV
VGAVDILLNHRPRRSSKPSIAKLMQRIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQD
ISLPRPHAVGCECTLCNAKNKKDSLRHSRFRLDIYRCLASPSLIMLTEEDPILRAFELSA
DLRELSIVEVEFRNDYEDLAKQCKMFAKDLLAQARNSRELEVILNHTSSEDHINKRGLME
ERMNLSRLKLAIKYNQKEFVAQSNCQQFLNTVWFGETASYRRKHTCLKMATVLSVAMLWP
LLSVCYLLVPRSRVGQIIHTPFVKFIIHSASYFTFLLLLNLYSLVYNEGKKNTMGPALEM
IDYLLILWIIGMVWSDVKRLWYEGLEDFLDELRNQLSFVMNSLYLATFALKIVAHSKFKN
AQETERKNWDAFHPILVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQEFGKF
LGLFLLVLFSFTIGLTQLYGKDQKDPDKDPAKDCEGIFCQQQSNDAFHTFMGTCYTLFWY
IFSLAHVALFVTRISYTEELRSCVGAMIIGTYNIVVVIVLTKLLVAMLHKSFRQIANHED
KEWKFARAKLWLSYFDDKCTLPPPFNILPSPKTVCYLVTSMSKWICSHTSKGKVKRQNSL
KEWKNLKQKRDENYQKIMCCLVHRYLTSTRQKMQSTDQATVENLNDLRQDLSKFRNEMRD
LLGFRTSKYAMFYPRS
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcagtgtctgtccgtactcgctctccgtcgtaatggcagctctgtaccagggc
acggacgcttcctctccggacaaatttctggccttgaaagacgtgagagaagtgaaagag
gaaacgacactggatgagaagctcttcttgctggcatgcgagaaaggtgactactacatg
gtgaagaaactgctcgaggagaacaggcacggcgagctcaacgtcaactgcgtagacgtg
ctgggccgagacgccgtgaccatcgccatcgagaacgagaatctcgacatcctgcagctt
ctcctggaacatggctgccaggcgacagatgccttgttggtggccatagactcagaggtg
gtaggagctgtggacatcctcctcaaccacagacccaggcgatcctccaagccctctatt
gctaaattgatgcagaggatccagaatccggagtactccaccaccatggacgtggctccg
gtcatcctggcggcccacaggaacaactacgagatcctgactatgctgctgaaacaggac
atctctcttccccggcctcatgccgtaggctgcgagtgcacgctctgcaatgctaaaaac
aagaaggacagcttacgacactccaggtttcgcctcgacatctaccgctgcctagccagc
ccctctctcatcatgctgactgaagaagatcccatacttcgagcctttgagctgagtgca
gacctgagggagctcagcatcgtcgaagtggaattcaggaatgactatgaggatctggct
aagcagtgcaagatgtttgccaaggacctgctggctcaggctcgaaattctcgagagctg
gaagtgattctcaaccacacgtccagcgaggatcacatcaacaagagaggcttaatggag
gagcgcatgaacctcagccgacttaaacttgccatcaagtacaaccaaaaagagtttgtg
gctcagtccaactgtcagcagttcctgaacaccgtgtggttcggggagacggccagctac
cggcgcaaacacacctgcctaaagatggccacggtgctgagcgtggcaatgctttggccg
ctgctctccgtctgctaccttctggtgccgcgctcccgagtcggccagataatccacacg
ccttttgtcaagttcatcatccacagcgcctcctacttcaccttcctgctgctgctcaac
ctgtactctctggtctacaacgagggcaagaaaaacacaatgggccccgcgctcgagatg
atcgattacctgctcatcctctggatcataggaatggtgtggtcggacgtgaagcgtctg
tggtacgaggggctggaagacttcctggatgagttgaggaaccagctgagttttgtgatg
aattccctctaccttgccacctttgccctcaagatagtcgctcatagcaagttcaaaaac
gcacaggaaacagagaggaagaactgggatgccttccatcccatcctggtggctgagggc
ctgtttgcctttgccaacgtgctgagttacctgcgactcttcttcatgtacaccaccagc
tccatactggggccactgcagatctccatgggtcaaatgctgcaggagtttggaaagttt
ctgggcctcttcctgctcgtgttattctccttcaccattggactcacccagctgtatgga
aaggaccagaaagacccagacaaggatccggccaaggactgtgagggcatcttctgccag
cagcagagcaatgatgcattccacacgtttatggggacctgctacaccctgttctggtac
atcttctccctggcacacgttgcactcttcgtcactcgcatcagctacacagaagagctg
cgctcttgcgtgggggccatgatcatcggcacatacaacatcgtggtggttattgtgctg
actaagcttctggtggccatgctccataaaagtttcagacaaattgctaatcacgaggat
aaggagtggaagtttgctcgggccaaactctggctcagctactttgatgacaagtgcacc
ctgcctcctcccttcaacatcctgccctccccaaagactgtctgctacttggtgaccagc
atgagcaagtggatctgttcacatacctcaaagggcaaggtgaagagacagaatagcctt
aaggagtggaagaacctgaagcagaagcgtgatgagaactaccagaagatcatgtgttgt
ctggttcaccgctacttgacctccacgcggcagaagatgcagagcacagaccaggccacg
gtggagaatctgaacgacctgcgccaggatctgtccaagtttcgcaacgagatgagagac
ctgttgggcttccggacatccaaatatgccatgttctacccgaggagctaa
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