Embiotoca jacksoni (black perch): 138204319
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Entry
138204319 CDS
T10523
Symbol
u2surp
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
KO
K12842
U2-associated protein SR140
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138204319 (u2surp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eja03041
]
138204319 (u2surp)
Spliceosome [BR:
eja03041
]
Complex A
U2 snRNP components
U2 related factors
138204319 (u2surp)
Complex B
138204319 (u2surp)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Surp
RRM_1
cwf21
CID
CTK3
SET_assoc
RRM_7
DUF2408
Motif
Other DBs
NCBI-GeneID:
138204319
NCBI-ProteinID:
XP_069015572
LinkDB
All DBs
Position
Unknown
AA seq
989 aa
AA seq
DB search
MADRTPGGSQKASAKALLESKLKSFSIGKMAVAKRTLSKKEQDEIKKKEDERAAAEIYEE
FLAAFEGGEGKVKAFVRGGIANATKDEAASDEKKGKLYKPKSRFESQTKTFLPLETPPQF
LAIDKRQTLKKATEKEKKKSNLELFKEELKQIQEERDERHKMKGRVSRFEPLSGTDGRRS
SDGSSRRNRPSSVLDDCAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRYGPLASVK
IMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMNFEMKLGWGKGVPIPPHPIY
IPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPLLPPPKNKEEFEKTLSQAIVKVVIPTE
RNLLSLIHRMIEFVVREGPMFEAMIMNREINNPMYRFLFENQSPAHVYYRWKLYSILQGE
APAKWKTEDFRMFKNGSLWRPPPLNPYLHGPYDDGEEEEEEEESSKKGCLKEDERDKLEE
MLRALSPRRGDIAEAMLFCLSHAEAAEEIVECVTESLSILKTPLPKKIARLYLVSDVLYN
SSAKVANASYYRKYFETKLCQVFSDLNATYKTIQGHLQCENFKQRVMSCFRAWEDWAVYP
DPFLIKLQNIFLGLVNLSAEKEVPTLVVEVKDAEPTEDIDGAPIGEYVDGTLLEDVDGVP
IDAGPIDGAPIDGAPLDDLDGVPIKPMEEDIDGIPLDQSKETAFKVAPSKWEAVEESELQ
AQGETFLAVTTSKWEVFEQPEETKKDEDDSDDDDRSPRSEDNLSYSNPIRDDSDMKSKMS
EMNEEKRTKLREIEVKVMKFQDELESGKRPKKPGQGIQEQVEHYRDKLLQKEKEKEKLER
EKEREKKEKEKAEARLKELKKEKEKEDTPTRKERYLSCPVDRKRRHSGSPSPTRSASRRG
RSSSPRSERSERSERSDRSYSKDTSSRASHKDSPRSSNKKSSKRSPSSPRTPKRSRRSRS
RSPKKSAKKSRSKSRSPHRSHKKSKKSKH
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccgaacgcctggtggctctcaaaaagctagcgctaaggcgctgctcgagagc
aaactgaagtccttcagcatcggcaagatggcagtggccaagaggaccttaagcaagaag
gaacaagatgaaatcaagaaaaaggaagatgagcgggcagcagccgagatttacgaggag
tttcttgctgcttttgaaggaggggagggaaaagtcaaggcctttgtccgcggtggtatc
gcaaatgcaacgaaagatgaagcagcttctgatgagaagaaagggaagttgtacaagccc
aaatcacgttttgagtcccaaacaaaaaccttcttgcctttggaaaccccacctcaattt
ttggctattgacaaaagacagactttgaagaaagccaccgaaaaagaaaagaaaaagagc
aacttggagcttttcaaagaagaacttaaacaaatacaagaagagagggatgaacgacac
aagatgaaaggacgcgttagtcgtttcgaacctctctccggcacggacggaagacgctca
tcggatggttcttcaagaagaaaccgtccgtccagtgttttggatgattgtgccccgggt
tcccatgatgtcggagacccatccactacaaacttgtaccttggaaacatcaatccacag
atgaacgaggagatgctgtgtcaagagttcggccgctatggcccgctggccagtgtgaaa
atcatgtggccgaggacagatgaggagagggctcgggagaggaactgtggctttgtggct
ttcatgaacaggagggatgctgagcgagcactcaagaacctaaatggaaagatgataatg
aactttgagatgaaattaggatggggcaaaggcgtgcctattccaccccatcccatctac
atccctccttccatgatggagcatacacttccaccgcctccctctggcctgcccttcaac
gcacagccccgggagaggctaaagaaccccaatgcccccctgcttcctccacccaaaaac
aaggaggagtttgagaagactctgtcgcaagccatagtcaaagtggttatcccaacagaa
aggaatttactctctctcatccaccgaatgatcgagtttgtggtgcgtgaaggcccaatg
tttgaagccatgatcatgaacagagaaatcaacaatcccatgtacaggtttttatttgag
aaccagagcccagcacatgtatactaccggtggaagctttactccatactgcagggtgag
gcaccagccaaatggaaaacggaggacttcaggatgtttaaaaatggttctttgtggcgt
ccacctccacttaacccatacctccacggcccttatgacgatggggaggaagaggaggaa
gaggaggagtccagcaagaaaggctgcttgaaagaagacgagcgggacaaactggaggag
atgctgcgtgctttgtctccccggagaggagacatcgcggaggccatgctgttttgtctc
agtcacgctgaagctgctgaagagattgtagagtgcgtcacggagtccctctccatctta
aagactcctctgcccaagaagattgcgcggttatatctggtttccgacgtgctgtacaac
tcctctgccaaagtagccaacgcgtcgtactacagaaaatattttgagacgaagctctgc
caggttttctcggacctcaacgcgacgtacaagacgatacaaggccaccttcagtgtgag
aactttaagcaacgggtgatgtcatgtttccgggcgtgggaggactgggctgtctacccc
gaccccttcctcatcaagctgcagaacatcttcctgggtctcgtcaatctgtccgcagag
aaggaggtccctaccctcgttgtggaggtaaaagatgctgagcccacagaggacatcgac
ggggctccgataggagagtacgtggacggcactcttctggaggacgtggacggggtgccg
atcgacgcggggcccatcgacggggcgccgatcgacggggcccctctggatgacctggac
ggagttcccatcaagcccatggaggaagacatagatggaataccattggatcagtccaag
gaaacggccttcaaggtggcgccgtcgaaatgggaagcagtggaagagtcggagttacag
gctcaaggtgagaccttcctagccgtgacaacctcaaaatgggaggtatttgagcagcca
gaggaaacaaaaaaggatgaagacgacagcgatgatgatgacaggagccctcgctctgaa
gacaacctgagctactccaaccccatcagagacgattcggatatgaagtccaagatgtct
gaaatgaacgaggagaagcgcaccaagctccgagaaatagaggttaaagttatgaaattc
caagacgagctcgagtcggggaaaagacccaagaagcctgggcagggcattcaggagcag
gtggagcactacagggacaaactacttcaaaaggaaaaagaaaaggagaaacttgaacgg
gagaaagagagggagaagaaagagaaggagaaagccgaggcccggttgaaagagctgaag
aaggaaaaagagaaggaggacacgccgaccaggaaggagagatatttgtcctgtccggtt
gacaggaagcggcgtcacagcggctctcccagtccgacgcggagtgccagcagacgaggc
cggtcgtcctcgccgcgctcggagcgctcggagagatcagaacgctccgaccgctcgtac
tctaaagacacgtcgtcccgcgcctcccacaaagactccccccgatccagcaacaaaaag
tcatcaaagagatcgccctcgtcacctcgcacgcccaaacgatccaggaggtcgcgctcc
aggtcgcccaagaaatcggcgaagaagtcccgctccaaatcaaggtccccacaccgatct
cacaaaaagtcaaaaaagagcaaacactga
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