Embiotoca jacksoni (black perch): 138204339
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Entry
138204339 CDS
T10523
Symbol
shha
Name
(RefSeq) sonic hedgehog protein
KO
K11988
sonic hedgehog
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
138204339 (shha)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
eja01002
]
138204339 (shha)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
eja00536
]
138204339 (shha)
Peptidases and inhibitors [BR:
eja01002
]
Cysteine peptidases
Family C46: hedgehog family
138204339 (shha)
Glycosaminoglycan binding proteins [BR:
eja00536
]
Heparan sulfate / Heparin
Morphogens
138204339 (shha)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Intein_splicing
Vint
DUF7764
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
138204339
NCBI-ProteinID:
XP_069015627
LinkDB
All DBs
Position
Unknown
AA seq
415 aa
AA seq
DB search
MLLWTKIVLVGLICLSLVSSGMGCGPGRGYGRRRHPKKLTPLAYKQFIPNVAEKTLGASG
RYEGKITRNSERFKELTPNYNTDIIFKDEENTGADRLMTQRCKDKLNSLAISVMNQWPGV
KLRVTEGWDEDGHHFEESLHYEGRAVDITTSDRDKSKYGTLSRLAVEAGFDWVYYESKAH
IHCSVKAENSVAAKSGGCFPGASTVTLQDGTQKAVKDLQAGDRVLAADDDGNPIYTEFIM
FIDRDSTTRRLFYVIETDSGQKITLTAAHLLFVDRDNSTEAGERMSAIFASQVQSGQKVF
VFDAGRGRLAPVTVKRIYTQKHEGSFAPVTVQGTVVVDHVLASCYAVIEDHDLAHWALAP
VRLAHWVSSLLFSSQPRVCAQNDGVHWYSKILYQLGTWLLDSHSIHPLGMSVYPS
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgctgctctggaccaaaatcgttttggtcggtctcatctgcttgtccttggtgtcctct
gggatgggatgcggaccgggcaggggctacggcaggagaagacacccgaagaagctgaca
cctcttgcgtacaagcagttcatccccaacgtggcggagaagaccctcggggcaagcggc
agatacgaaggcaagatcacaagaaactccgagcgatttaaagaactgactcccaattat
aacacagacatcatattcaaggatgaggagaacaccggtgccgacaggctaatgactcag
agatgtaaagacaagctgaactcgctggccatctcagtgatgaaccagtggcccggggtg
aagctgcgggtcaccgagggctgggacgaggacggacaccacttcgaagagtctcttcac
tacgagggcagggccgtggacatcaccacctcagacagagacaaaagcaaatacggcact
ctgtccaggctggcggtggaagccggatttgactgggtctattatgaatctaaagcccac
atccactgctctgtgaaagcagaaaactcagtggcagcaaagtcaggcggctgcttccca
ggcgcctccacggtcacccttcaggatggtacccagaaggcggtcaaagatctccaggcc
ggggacagggtcctggcagcagatgacgacggaaacccgatttacaccgagttcatcatg
ttcatagaccgagactcgacgaccaggaggctcttctacgtgatcgaaaccgactcgggc
cagaaaataaccctcaccgccgcgcatctcctcttcgtggaccgagacaactccacggag
gcaggggagaggatgtcggcaattttcgccagccaagtccaatccggacaaaaagtgttc
gtgtttgacgccgggcgaggtcgactcgcgcctgtgaccgtaaaacggatttacacgcag
aagcacgagggctcctttgcgccggtgaccgtgcaggggaccgtcgtggtggaccacgtc
cttgcgtcctgttacgcagtgatcgaagaccacgacctggcgcactgggccctggcacct
gtcaggctcgcccactgggtgtcctcgttgcttttcagttcccagcctcgagtctgtgcg
cagaacgacggagtgcactggtactccaaaatcctttatcaattagggacatggctcttg
gacagccactcgatccatccacttgggatgtcagtatacccaagttga
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