Embiotoca jacksoni (black perch): 138205065
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Entry
138205065 CDS
T10523
Symbol
vps39
Name
(RefSeq) vam6/Vps39-like protein isoform X1
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja04140
Autophagy - animal
eja04142
Lysosome biogenesis
eja04145
Phagocytosis
eja04148
Efferocytosis
eja05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
138205065 (vps39)
04142 Lysosome biogenesis
138205065 (vps39)
04140 Autophagy - animal
138205065 (vps39)
04148 Efferocytosis
138205065 (vps39)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
138205065 (vps39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
eja04131
]
138205065 (vps39)
Membrane trafficking [BR:
eja04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
138205065 (vps39)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
TPR_Vps41
VPS18_solenoid_2nd
Clathrin
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
138205065
NCBI-ProteinID:
XP_069016812
LinkDB
All DBs
Position
Unknown
AA seq
876 aa
AA seq
DB search
MHDAYEPVPILEKLPLQIDCLAAWEDWLLVGTKPGHLLLYRIKKDAGTNRFEVTLEKSNK
NFSKKIQQLYVVSQYKILVSLLENNIHVHDLLTFQQITVVSKAKGATLFACDLQQTSAGE
ERLRMCVAVKKKLQLYYWKDREFHELQGDFGAPDIPKSMAWCENSICVGFKRDYYLIRMD
GRGSIKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGVCTQKCALNWTDIPIAME
HQPPYIIAVLPRYVEIRTFEPRLLVQSVELQRPRFISSAGPNIVYVASNHFVWRLVPVSI
ASQIRQLLQDKQFELALQLAKMKDDSDGDKKQQIHHIQNLFAFNLFCQKRFDDSMQVFAK
LGTDPTHVIGLYPDLLPSGYRKQLHYPNPLPTLSGAELEKAHLALIDYLTQKRSHLVKQL
NDSDPSTTSPLMEGTPTIKSRKKLLQIIDTTLLKCYLHTNVALVSPLLRLENNHCHIEES
ECVLKKAQKCSELIILYEKKGLHQKALQVLLDQSTKANSPLKGHERTVQYLQRLGVENLG
IIFEFSPWVLKICPEDGLKIFTEDLTEVETLPRDKVLQFLKEGFEELAIPYLEHIIYVWD
DKGPEFHNVLIQLYLGRVQGLMKQYLNSLPEGVPAVAAGMEKGDLGEFRNKLLSFLDISS
SYEPARLISDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTRMAEEYCHRHYNSSVE
GNKDVYLSLLRMYLSPPDVHCLGPIKMELSEPQANLQAALQVLELHHSKLNTTKAINLLP
ANTQIREIRVFLESVLEEKAQRKRCNQVLKSLLQAEFLRVQEERIFHQQVKCVITEEKTC
RVCKKKIGNSAFARYPNGVVVHYFCCKDRNACPTEQ
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgcatgacgcatacgagccagtgcctattttggagaagcttcctcttcagatcgattgc
cttgcggcctgggaggactggctgctcgttggaacaaagccagggcatcttcttctctac
cggataaagaaggatgcaggcaccaaccggtttgaggtgaccctggaaaaatccaacaag
aacttctccaagaagattcagcagctgtacgtcgtctcacagtacaaaatcctcgtcagt
cttctggagaacaacatccacgtccatgaccttttgaccttccagcagatcaccgtggtg
tccaaagccaaaggagccacgctttttgcatgtgacctgcagcaaaccagcgctggggaa
gaaaggctgaggatgtgtgtcgctgtgaagaagaaactccagctgtattactggaaggac
agggagttccacgagctgcagggcgactttggtgcaccagatattccgaagtctatggcc
tggtgcgaaaactccatatgtgtcggcttcaaacgagactattacctcatccggatggac
ggccgcggctccatcaaggagctattccccaccgggaaacagttggagcctctggtcgcc
ccgctggctgacgggaaggtggctgtcgggcaggacgacctcaccgtggtgctcaacgag
gagggcgtttgcacccagaagtgcgccctgaactggacagatatccccatcgccatggag
caccagcctccctacatcatcgccgtcctgccgcggtacgtggagatccggaccttcgag
ccgaggctgctggtgcagagcgtggagctgcagaggccgcgcttcatctcgtcagccggg
ccaaatatcgtgtacgtcgccagcaaccatttcgtgtggcgcctggttcccgtctccatc
gccagccagattcggcagctcctccaggacaagcagttcgagctggctcttcagctggcg
aagatgaaggatgattcagacggcgataagaagcagcagatacatcacatccagaatctc
ttcgccttcaatctgttctgccagaagagattcgatgactccatgcaggtgtttgccaaa
cttggcacagatcccacacacgtgatcggtctgtacccggacctgctgccttcaggctac
cgcaagcagctgcactaccccaacccgctgcccacgctgtcgggggcggagctggagaag
gctcatctcgctctcatcgattacctcacccagaaacgcagccaccttgtgaaacagctg
aacgactccgacccgtccacaacgtctcctctcatggagggaacgcccaccatcaagagc
cgcaaaaaactcctgcagatcatcgacaccaccctgctgaagtgctacttgcataccaac
gtggccctggtgtcgccgctccttcgtctggagaacaaccactgccacatcgaggagagc
gagtgcgtcctgaagaaagctcaaaagtgcagcgagctcatcattctctatgaaaagaag
ggcctgcaccagaaagctctgcaggtgctgctggaccagtccaccaaggccaactctccc
ctgaagggccacgagcgaacggtgcagtacctccagagactcggagtggagaatctgggc
atcatctttgagttctctccctgggtgctgaagatctgtcctgaagacggcctgaagatc
ttcactgaagacctgaccgaggtggagacgttgccccgagacaaggtgctgcagttcctg
aaggagggctttgaggagctcgccatcccttatctggagcacatcatctacgtgtgggac
gataagggccccgagtttcacaacgtgctgattcagctctaccttgggagggtccagggc
ctcatgaaacagtacctcaactcgctgcccgaaggagttcccgccgtcgctgctgggatg
gagaaaggagatctgggagagttcaggaacaagctgctgtccttcctggatatttcgagc
agctacgaaccggccagactgatcagcgacttccccttcgacgggctgctggaggagcgg
gcgctgctgctgggtcgcatgggaaaacacgagcaggcgctcttcatctacgtgcacatc
ctgaaagacacccgcatggctgaggaatattgtcaccgtcactacaacagttcagtggag
ggaaacaaagatgtttatctgtctctgcttcggatgtacctgtctcctcctgacgtccac
tgcctggggcccatcaagatggagctgtcggagcctcaggccaacctccaggcagccctg
caggtcctggagctgcaccacagcaagctcaacaccaccaaggccattaatctgctcccg
gcaaacactcagatccgggagatccgggtcttcctggagagcgtgctggaggagaaggct
cagaggaaacgctgcaaccaggtgctgaagagtctgctgcaggccgagttcctccgggtg
caggaggagcgaatcttccaccagcaggttaaatgtgtcatcacggaggaaaagacctgc
agagtctgcaagaagaagatcggaaacagtgcgttcgccaggtatcccaacggcgtggtg
gtgcattacttctgctgcaaagaccgcaacgcctgtcccaccgagcagtga
DBGET
integrated database retrieval system
