Embiotoca jacksoni (black perch): 138205247
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Entry
138205247 CDS
T10523
Symbol
hif1al
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha, like isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja04137
Mitophagy - animal
eja04140
Autophagy - animal
eja04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
138205247 (hif1al)
04137 Mitophagy - animal
138205247 (hif1al)
04148 Efferocytosis
138205247 (hif1al)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eja03000
]
138205247 (hif1al)
Transcription factors [BR:
eja03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
138205247 (hif1al)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
HIF-1
PAS
PAS_9
PAS_4
Motif
Other DBs
NCBI-GeneID:
138205247
NCBI-ProteinID:
XP_069017133
LinkDB
All DBs
Position
Unknown
AA seq
699 aa
AA seq
DB search
MFGVYNLVQKKRENRYRCSVFRLNMEQKEETVAVKRTSLEQRKLRSRDAARCRRSQETDV
FYELAHTLPFPHRVSAHLDKAAIIRVTLSFLQMHHLLRPDEGEKEESDEDEKEDDDPMDV
FYPQALAGFIMVLAEEGDMIYLTENVNKHIGIAQLELLGQSIYDFVHPCDQEELRDLLTP
RPGLSKKSRNEQPSERNFFLRMKSTLTSRGRSVNIKSATWKVLHCTGRMRPFGGGSTSPP
AASVMTLLCEPVPHPSSVEFPLDTRTFLTRHSMDLHFTHCEGRVTELVGYKPDDLIGRSA
FEFHHARDSNHINKSLRTLLSKGQVITSHYRFLANDGGFVWAETQATVLYSSKTSQPEAI
VCLNFILSAVEQPDVVFSAEQTRCGRLPKDEAVSPPLAPEDCWISDVCDSEPEDIERPAE
TEDADSDVSSAAELLVKLKETPDDLLQLDPEADDAMAPLTGGFVELSFATSTHPNLVPDH
PQDLCSPQLRQLLSPIFNPLTPPSSSSSSPSSPEPVPSLCETAATDTGEVKKILAFCPDD
AQEKGGPQEAMDLDMLAPYISMDDDFQLTLLNTLPEEADKPSDATPAAAASRKRTHNPDE
EMPAQLMVHDKRQKHDPSSIEEELLLSHRLLGCLEEADQSDLTLDPGPGPRGCSQLLTDR
DPVLGGIQGLCDTTVLMRDIFSGLTRGPPDLSPPLSPLT
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtgtttacaatcttgtgcagaagaaacgagaaaatcggtatcgctgttcggtg
tttcggttgaacatggagcagaaggaggagacggtggcggtcaaacggactagtttggag
cagagaaagctgcgttctcgtgatgcggccagatgtaggcgaagtcaggagactgatgtg
ttttacgagctcgcccacaccctgccgttccctcaccgagtctccgcacacctggacaaa
gccgccatcatcagagtgaccctcagcttcctgcagatgcaccacctcctgcgacctgat
gagggtgagaaagaagagtccgacgaggacgagaaggaagacgacgatccgatggacgtc
ttctatcctcaggcgctcgctggcttcatcatggtgctcgctgaggagggagacatgatc
tacctgacggaaaatgtcaacaaacacatcggcatcgcacagctggagctgctgggtcag
agtatttatgactttgttcacccctgtgatcaggaggagctccgagacctgctgactcca
cgcccaggtttgagcaagaaatcccggaatgaacagccgagcgagagaaacttcttcctg
cgaatgaagagcacgctgaccagcagggggcgcagcgtcaacatcaagtcggctacctgg
aaggtcctccactgcacaggtcgcatgcgtccgttcggcggcggctccacgtcgccccct
gcagccagcgttatgactctgctgtgtgagcccgtccctcacccgtccagcgtggagttc
cctctggacacccggaccttcctcacccgccacagcatggacctgcacttcactcactgc
gagggcagggttacagagctggttggatacaaaccggacgatttgattggacgctcagcc
tttgagtttcatcacgcacgcgactcaaatcacatcaacaagagcctgcgcacattgctg
tccaaaggtcaggtgatcaccagccactaccgcttcctggcaaacgacggcggcttcgtc
tgggcggagactcaagcgaccgtcctctacagcagcaagacgtcgcagcccgaggccatc
gtctgcctcaacttcatactcagcgccgtggagcagccagacgtcgttttctccgccgag
cagacccgttgtggccggctgccgaaagacgaagccgtctcaccgccgctcgcaccagag
gattgttggatttccgacgtctgcgattctgaacccgaggacatcgagcgtccggctgag
actgaagacgcggattcggatgtcagcagcgctgcagagctcctcgtgaagctgaaggag
acgccagatgatctcctccagctggatcctgaagctgacgacgccatggcgcctctaaca
ggaggttttgttgagctgtcgtttgccacttcgactcatccaaacttggtgccggaccat
cctcaggatctgtgcagtccccagctgagacagctcctctcgcccatcttcaaccccctc
actccaccttcatcatcatcatcatcaccctcctcacctgaaccggtgccgagcctctgt
gagacggcggcgacggacaccggcgaggttaaaaagatccttgccttttgtccagacgat
gctcaagagaaaggaggaccacaggaggcgatggatctggacatgttggctccttacatc
tccatggacgacgacttccagctgaccttactcaacacgttgcccgaggaagctgacaaa
ccctcggatgcgacgcctgcagcggcggcgagcaggaaacggacccataacccagatgaa
gagatgccggcccagctgatggttcatgacaagagacagaaacacgatccttcctcaata
gaagaggaacttcttctcagccacagattactgggctgtctggaggaagctgaccaatcg
gatctgaccctggacccgggcccgggcccgagaggctgcagtcagctgctcacagacaga
gaccccgttttaggaggcatacagggcctctgtgatactacagttctgatgagggacata
ttctcgggacttacacgaggccccccagacctctcgccacctctttcacctttgacctga
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integrated database retrieval system
