Embiotoca jacksoni (black perch): 138205341
Help
Entry
138205341 CDS
T10523
Symbol
robo1
Name
(RefSeq) roundabout homolog 1 isoform X1
KO
K06753
roundabout, axon guidance receptor 1
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
138205341 (robo1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
eja04515
]
138205341 (robo1)
Cell adhesion molecules [BR:
eja04515
]
Immunoglobulin superfamily
ROBO family
138205341 (robo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
Ig_VEGFR-1-like_5th
C2-set_2
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Ig_PDGFR_d4
Unc5_NetrinR_N
Motif
Other DBs
NCBI-GeneID:
138205341
NCBI-ProteinID:
XP_069017395
LinkDB
All DBs
Position
Unknown
AA seq
1692 aa
AA seq
DB search
MRGTWSGATPLFIIVLLRLAQAQEVPLVPETGVAQDAASEGATPAPTSEREDDNSLGYTG
SRLRQEDTPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTVEWYKDGERVETDRDNPRSQ
RMLLPSGSLFFLRIVHGRRSKPDEGSYVCVARNYLGEAVSHNASLEVAILRDDFRQNPAD
VIVAAGEPAVLECQPPRGHPEPTISWKKDGINIDDRDERITIRGGKLMITNARKSDAGKY
VCVGTNMVGERESEIAELTVLERPSFVRRPGSQVVLVDQSVEFRCEARGDPVPTVRWRKD
DGDLPKGRYEIREDHTLKIRRLASADVGSYTCVAENMVGKAEASATLTVHVPPAFVVRPR
NQVVGVGRTVTFQCEATGNPQPAIFWQREGSQNLLFSYQPPQPSSRFSVSQTGDLTITDA
ERSDVGYYSCQALNIAGSVITKALLEVTDVVSDRPPPVIRQGPTNQTVAVDGTLVLNCVT
SGNPTPTILWRKDGVLVSTHDSRVKQLDTGALQIRYAKLGDTGIYTCIASTPSGEASWKA
YLEVQEFGAPVQPNRPTDPNLIPSAPSKPDVTDVTRTSITLSWKPNLNAGATPTSYIIEA
FSHASGSSWQTLAEHVKTESFVLKGLKPSAVYLFLVRAANAYGLSDPSPITDAVKTQDIP
PTSQGVDHRQIQRELGEVLIHLHNPTILSSSSVRVQWTVEQQSQYIQGYKVMYRPSPEGL
QRSEWTVFEVRTPGEDSAVVPQLRKGITYEFKVRPFFNEFQGTDSDVKIGKTLEEAPSAP
PRKVTVMESGDNGTAIVVSWQPPPEEEQNGVVQEYKIWCLGNESRYHINRTVDGTTLSVL
IPSLAPGIRYSVEVAASTGAGPGVKSDITFFQIDSSGRMTESVSQENPLSQQISDVVKQP
AFIAGIGAACWIILMVFSIWLYRHRKKRNGLSSSYAGIRKVPSFTFTPTVAYQRGGEGVS
SAGRPGLLNIGDSATQPWLADTWPNSCSNHNDCSINCCTAGNGNSDSNLATYSRPADCIA
NYNNQMENKQTNLMVTESGVYGDVDLSNKINEMKTFNSPNLKDGRFVGPGGQPTPYATTQ
LIQSSIMGNNINSDRGTAGSGGGLGGGGEVNEKHCWKPTSVQQQKQDMGSQLQYNIMEQN
KLNKDRYRGGDSPMPATIPYNQTHDTHTGGSYNSSDRGSSSTSGSQGQKKGMRTPKLPKQ
STMNWADLLPPPPANPPPSRTTEEYSLSMVESCDPDMQCPMPPSHMYLQPHELEEEEEME
RGPTPPIRGAASSPAAVSYSHQSTATLTPSPQEEMQPMLQDAPDSHERRRHAVSPPPPPM
PLSPSHTYGYISSPLALDTDGMEEEDILEEEEEEEDDGDETDAEVAKMHYHHTHPHTHPH
HPQMHPRRLLLRGLEQTPASSMGDLESSVTGSMINGWGSASEEDNVSSGRSSAVSSSDGS
FFTDADFAQAVAAAAEYSGLRVAKYPNSQGQEVGGASARKYQINPSGHRPGSPVSSDSNM
SMAAVHRRPPKKQKQHPAVHPGSQRRDAFNEDLPPPPIPPPAVLKSPTHPSKTTLEGRGV
ISPKAGENRDKRGGTSGYRHRDGSDPRTSSSERKDAQDRQRTAHGGKGNKHESSTANKAR
QHAGSEDIMPYCRPQFPTVNNPRDPSSSSSMSSRGSGGRRRGEGGRRNPADLGLNASGAF
QPGDEELEMVES
NT seq
5079 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggcacatggtccggggccacgcccctcttcatcattgttctgctcagactggct
caggcccaagaggttcctttagtcccagagacgggagtcgctcaggatgctgccagcgaa
ggggcaacaccagctcctacctccgagcgtgaggatgacaactctttgggctacacagga
tcccgtctgcgccaagaggacaccccgccccggattgtggagcacccatcggacctgatt
gtttccaaaggggagcctgccactctcaactgtaaagcagaggggcggccgaccccgaca
gtggagtggtacaaggatggagagcgggtggaaacggacagggacaatccccgttctcaa
cgcatgctgctgcccagcggctccctcttctttcttcgcatcgtacacggtcgacggagc
aaaccggatgaaggttcttacgtgtgcgtcgcccgcaactacctgggagaggcagttagc
cacaacgcttcgctggaagtagccattctacgtgatgacttcagacaaaaccctgcagat
gtgattgtggcagcgggagagccggccgtcctggagtgtcagcctcctcgtggacatcct
gagcccaccatatcatggaaaaaagatggaataaatattgatgaccgagacgagagaatc
actatacgcggagggaagctaatgatcacaaacgcccggaagagcgatgctgggaagtac
gtgtgcgtcggcacgaacatggttggagaacgtgaaagtgaaatagctgaacttacagtg
cttgaacgtcccagcttcgtacgtcgcccgggcagccaggtggtgttagtggaccaaagt
gtcgagttcagatgtgaggcccgtggcgacccagttcccactgtgcgctggaggaaagat
gacggtgacctaccgaaaggaagatatgagattcgtgaggaccacaccctgaagatccgt
cgcctggcctcagccgatgtaggctcctacacctgtgtggcagaaaacatggtgggcaag
gcggaggcgtcggccacgctcaccgtccacgtgcccccagcctttgtggtgagaccaagg
aaccaggtggttggagttggcagaaccgtcaccttccagtgcgaggccactggaaaccca
caaccagccattttctggcagcgggaaggcagtcagaacttgctgttctcctaccagcct
cctcaaccctccagccgattctctgtgtctcagaccggtgacctgaccatcactgatgct
gaacgctcagacgtgggatactacagctgccaggccctcaacattgctggcagcgtaatc
accaaggctctgctagaggtcaccgatgttgtctcagaccgcccgccaccagttatccga
caaggcccaaccaatcagacggtggctgtggatggaacgctggtcctcaactgtgtgaca
tctggtaaccccaccccgaccatcctgtggaggaaggatggtgtcttagtgtccacacat
gactcccgggtcaaacagttggacacaggtgcactgcagatacgctatgcgaagctcggt
gacactggcatctacacctgcatcgcctccacacccagcggagaggcctcatggaaagcc
tatttagaagtccaagaattcggagccccagtccagccaaacagaccgactgacccaaac
ctgatccccagtgccccttccaagcctgacgtcactgatgtcacccgtacctccatcact
ctttcctggaaacccaaccttaatgctggagccacacccacctcctatataatagaggca
ttcagtcatgcatcagggagcagctggcagaccttggcagagcatgtgaaaactgagtca
ttcgtgctgaagggcttgaagcccagtgcagtctacctcttcttagtacgggccgccaat
gcctatgggctgagtgatcccagtcctatcactgatgctgtgaaaacacaagatatcccc
cccaccagtcagggtgtggaccatcggcagatccagagggagctgggagaagtgctcatt
cacctgcacaaccccaccattctctcctcctcatctgtcagggtgcagtggacggtggag
cagcagtcccagtacatccagggctacaaggtgatgtacaggccctcgccagaggggctg
cagaggagcgaatggaccgtgttcgaggtgcggacccccggggaagacagcgctgttgtg
ccgcagcttcggaagggcatcacgtatgagttcaaagtccgccccttcttcaacgaattc
cagggaaccgacagtgatgtcaaaattggcaagacgctggaggaagcccccagtgcccct
cctcgtaaggttacagtgatggagagtggggacaatgggactgctatcgtggtctcctgg
caaccccctccagaggaggagcagaatggggtggtccaggagtacaagatttggtgcttg
gggaacgagagcaggtaccacatcaaccgtacagtcgacggcacaaccttatctgtgctg
attcccagtctggccccggggatccgctacagtgtggaggtagcagccagcaccggggcg
ggtcctggggtcaagagtgatatcaccttcttccagattgattcatctggacgaatgacg
gagagcgtgagtcaggagaaccctctgtcccagcagatctctgacgtcgtcaaacagccg
gcctttattgcaggcataggagccgcttgttggattatcctcatggtcttcagcatctgg
ttgtacagacacaggaagaaaagaaatggcctttccagcagctatgcaggcatccgaaaa
gtgccatcctttactttcacaccaacagtggcatatcagagaggtggagaaggagtcagc
agtgctggaaggcctggtttgctaaacattggggactcggccactcaaccttggctggcc
gacacgtggcccaactcctgctccaaccacaatgactgcagcatcaactgctgcactgca
ggcaacggcaacagcgacagcaacctggcaacgtacagccgaccagccgactgtatcgcc
aattataacaaccagatggaaaacaagcagaccaacctcatggtgacagagtcaggagtc
tatggagatgtagacctgtccaacaagatcaatgagatgaagaccttcaacagccccaac
ctaaaagatggccgctttgttggtccggggggccagccgacgccttacgccaccacccag
ctcatccagtcctccatcatgggcaacaacataaactcagacagagggacggcagggagc
ggaggcggactcgggggtggaggggaggtgaatgagaaacactgctggaagcccacctcg
gtccagcagcagaaacaggacatgggctcccagctgcagtacaacatcatggagcaaaac
aagctaaacaaggaccgctacagaggaggtgacagtcccatgccagccaccatcccttac
aaccagacccatgacacccacactgggggctcctataacagctccgaccgaggcagcagt
agtacctctgggagtcagggtcagaagaagggaatgcgcactcccaaactacccaaacaa
agcacaatgaactgggctgaccttctgccccctcctcctgcaaacccacccccaagtcgg
acaacagaggagtactctctgtcgatggtagaaagctgtgatccagacatgcagtgcccc
atgcccccctctcacatgtacctgcagcctcatgagctggaggaggaagaggagatggag
agagggcccactcctcccatccgtggggctgcctcttcccctgcagctgtatcctacagt
caccaatccacagccactctcaccccctcacctcaggaggagatgcagccgatgctccag
gatgcaccagacagccacgaacgcaggcgccatgctgtgagccctccaccccctccgatg
cccctctctccttcacacacatacggctacatcagcagcccgttggccttggatactgac
ggtatggaggaggaggatatcttggaggaggaggaggaggaggaggacgacggtgatgag
acggacgcagaggtggccaagatgcactaccaccacacccacccccacacacaccctcac
catccccagatgcatccgcggcggttgctgctacgagggcttgaacagacgcccgcatcc
agcatgggcgacctggagagctcggtgaccggctccatgatcaatggatgggggtcagct
tctgaagaggataatgtctcttcagggaggtccagcgcggtcagctcatctgacggatcc
ttcttcacagatgccgactttgctcaagcggtcgcggcagctgcagagtattcaggcctc
agagtggcaaagtaccccaattcacagggccaggaagtgggaggagcttcagcacgaaaa
taccaaataaacccgtcaggccaccgcccaggcagcccggtgtcttccgacagtaatatg
agtatggcagctgtacacaggaggcctcctaaaaagcaaaaacagcatcctgcagttcat
ccagggagtcagcgacgtgacgccttcaatgaagatctccctcctccacccattccacct
ccagcagtgcttaaatcccctacacacccctccaagacaaccctggagggccggggagtc
atttcccccaaagcaggagagaatcgagacaagagaggaggaacgagtgggtatcggcac
cgggacggctcggaccccagaaccagctcatctgaacgcaaagacgctcaggacagacaa
aggactgctcatggagggaaagggaataaacacgagagtagcactgccaacaaggcacgc
caacacgcaggttcagaggacattatgccctattgccgaccacagttccccacagtcaac
aacccccgagacccaagctcctccagctcaatgtcctccaggggctcagggggccggcgg
agaggagaaggaggtcgcaggaaccctgcagacttgggcctcaacgcctctggagccttc
caaccaggagatgaagaattagagatggtagaaagctga
DBGET
integrated database retrieval system