Embiotoca jacksoni (black perch): 138205365
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Entry
138205365 CDS
T10523
Symbol
brca2
Name
(RefSeq) breast cancer type 2 susceptibility protein
KO
K08775
breast cancer 2 susceptibility protein
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja03440
Homologous recombination
eja03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
138205365 (brca2)
03460 Fanconi anemia pathway
138205365 (brca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
eja04121
]
138205365 (brca2)
03036 Chromosome and associated proteins [BR:
eja03036
]
138205365 (brca2)
03400 DNA repair and recombination proteins [BR:
eja03400
]
138205365 (brca2)
Ubiquitin system [BR:
eja04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
138205365 (brca2)
Chromosome and associated proteins [BR:
eja03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
138205365 (brca2)
DNA repair and recombination proteins [BR:
eja03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
138205365 (brca2)
FA (Fanconi anemia) pathway
Downstream FA components
138205365 (brca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA2
BRCA-2_OB3
BRCA-2_OB1
BRCA2DBD_OB2
BRCA2_TR2
Tower
Motif
Other DBs
NCBI-GeneID:
138205365
NCBI-ProteinID:
XP_069017435
LinkDB
All DBs
Position
Unknown
AA seq
3018 aa
AA seq
DB search
MDLPSTNMYDTFKDEIWKELGPLDPNWFELLTAQTSASEGSFSDQDDLCANQEGHFKAPL
DKPAFDTQLFSTPKVFRRRQIVSPETEDEQSFTAEQDEGALRWTATQSPHLFQTSNQRVQ
GMKHGGIQPQTQDSFDLFHSPCKSPATYAKQISESLGAQINPDISWTSSLNTPPAVPSTL
ILSKSDESPCPVSVSADKKVVFVRELFPSLSNASTVGVPPPKTNDMPAGNQGTVSPEAES
PNSPQASLIQSDGVWRQKLPDAIEDGEIRSTVASILDGAENVLSIFFANSSSALRKVKPR
RIKRKHIVQTEERGCSSTNTSTTNNTVPSEEAAAGQEPVRFPSSPLVTTGDTANSQWSPL
SLSQIPTFAVDDNISKEQLQSDSGCSPFVRPPMKITDSVINKKKRKFIYTVGTFKTQVQG
KETQSQKVDSSPGIAYSGPEVGVKQLEKAPDDTDCSSNGKNAMEEQGNLAGENLPLPPSA
QAKLQDLDMSQLCRDFAQDFSQIPDSVKLGKQAEGTERYFSPSACLSAMKQTKQKANPHR
GLDAGSNRRCVSTTDQNYSINEGTVSDSGFQSAVADITRMTASSNVLPWSEKTGQSQHCS
GFKTDFYRTFPSTNQGNRKVHLDVKAETELKERQTPDAGRKNELHIESMSTPLPSSTKET
VTNINCTPINAQTHGSLPDKTEVSIPSVRVSGFRTASNKGVRISLANLERAKHLFEETEG
GRSLSDQPTTWDRAMNGSSKSTASNSNQLPSLSERFGDNSYQLTDSQKADVTELCSLLEE
ADSQFEFTQFKTAKLNQKDDATSPQKADKELDPDYLTGIDFDDSFSSDTEKQQPDKMTSV
SDDKINSGTSDARSKSTCMSLSSAPKKENSSAGDRASFSEHISKGDNCRMSTEPKYPHRA
ECTETTQLENRNPLMLGVAFKTAGGNVLRVSKKCLSQARALFADLGENLTGQKSPDEKRT
ENDAQTEQKCCMDSNAGTDDLKSTIKDNCDIEERIQESVCSDKKVSTIRDPDRTKCFENS
KMDTTMCQSGFHMASGEGISISAKYMQQAGAFFKGCDEMDRNDGMSGLSIDPMAESVNGK
KNLSEFKNPQRTKVNTSEEHVSGSAKFKNANGALVAHYTKGPHPEHMEKNSAGCNSTLAL
KDSAAFRGNLLTSKPFSSPLCTTSKVIDSSAIDKLSSGDGFSAASGKKVPVSAEAMKRAG
CLLKEICILEDSKKQLNQKENAVRDGQFNAQIRDSPPKNDGFHTAGGKQISISSAALKKA
KSLLSEADEDAYESGVNPSSTFKIPAHAPPPRNAGFLAASGKTVALSSEALQKAKALFSD
TSLSTDIPAVSDARRSDKKQDSSENTEKIHCGFSTAGGQRVHVSQKTLLKAKHLLRECDD
SASTEAMQEADAFIKDCDKDWNSGIALKHKSVAPVKGSGTEKRNLLNFKPDQRVSVNISE
EPGNGKDTSTAVKQREDTLNGGFQTASGKRVAISSAALKKAKSLLSEGDEEEQQISVKPF
STFKIPAHAPPPRNAGFLSASGKTVAPSSEALQKAKALFSDISLSTDIPAVTETRNVSGS
GSEKRNLSKFKPDQGVTVNVSEEPEKGSTEDTNKPVKQRDDTLPPQSGGFQTASGKQVAI
SSAALKKAKTLLSECEGVEDEIDVTPPPHSETPVPGPSFRNGGFLAASGKPVALSSEALR
KAKALFSDISSSPDIPAGSNTSRSDKKHEGDAQNDAEKKHGGFRTAGGAKVHVSEKSLLK
ANKLFKELADGECHGSTSPHDTNKVDPSKVIDMKRTSDSNRTTTSDKNMSTKGSASLVVK
YFPSLQETDRGKETIKSSGHGGCSFIKDEALTDAVKFQEDKSSPSGVGNQHDSCEQDASC
ASDYEMNQTGSSEGYKVQIPAESTGLNFQSVNLTGCTETQQQFLAQEALDCTKALLEDEG
LAGQMTLENMALQDKPKSSNRSAEEEKRRGKRSVEAADITGQPPLKRRLLEDFDRVVDGP
RCSTLHAVKSCPNGVMKDRSVFKYSVALHPNITRPHGSGKNYVETRFQKTTLKQPSTPSE
SRSTPSKTPAFVPPFIKNVKADTLKDNVRTTAAFVPPFKKQRTIIQETSSKPQEQEDKYL
RLFVSNTYVPPTKNTPGATDVTAPVDTTSNNVLNNQSTLVVCGSGSSEASCADETSSRSQ
EYQTLGNTELARDVQDMRIRKKKRQTIRPLPGSLFLTRTCGVARIPLKVAVDGKPPARYT
QKQLYGFGVHKHVSEITSETAESFCFNLLQFIKREALTEDGGIQLADGGWLIPRNDGTAG
KEEFYRALCDTPGVDPKLISEAWVYNHFRWIVWKQSSMEKSFPETMGSLCLTPEQVLLQL
KYRYDVEVDHSRRPALRKIMEKDDTAAKTLVLCVCEVVSGGHNDTRTPQGADAKPEARSA
VVWLTDGWYAIKAQLDEPLTAMLHRGRLAVGGKLIVHGAQLVGPQEACAPLEAPESLMLK
ICANSSRPARWDVKLGFHKDPRPFLLPVSCLYCNGGPVGCVDIVILRSYPIQWMERKADG
GAVFRSARAEEKEARRYNSHKEKAMEILFAKVQAEFEKEEKRNLKPQRRRQTFSHQVIAS
LQDGEELYEAVGDDPAYLEAHLSEGQLETLHTYRRSLMEKQHAELQDRYRRALEAEDNDQ
SCPKRDVAPVWRLGIADSLDQTGSVYRLNLWRPSSDLQSLLKEGCRYKAYNLTASDGKNR
SSIQNVQLTGTKKTQFQELQASQEWLSARFKPRVSTNVVSLQNSEFQPLCGEVDLTGCLV
SIIDGQGSSPAFYLADGKLNFVKVRCFSSLSQSGLEDVLKPGVLLAVSNLQLRGQSMYPT
PVVYAGDLTVFSANPKEVHLQESLSQLKNLVQSQENFFLTAEEKLSLLVKSDGVSSICSP
ALQPQTPAPPTDRRQDSKTSVISQKPIRSLGSFTPVSRNPMAATSSTEKDPKSLKRRRAV
DYLSRIPSPPPLFNLSSSASPCVNKTFNPPRRSGTSSTLKTVQTPAHKPVDSPREGEWVN
DEELAMIDTQALCVGELL
NT seq
9057 nt
NT seq
+upstream
nt +downstream
nt
atggatttaccctcaaccaacatgtacgacacattcaaagatgaaatctggaaagagctg
ggaccactggaccccaactggtttgagttactgacagctcaaacgtccgccagcgaggga
agtttctctgatcaagatgacttgtgtgcaaatcaggagggacattttaaagcaccttta
gacaaacctgcattcgacactcagctgttttcaacccccaaagttttcagacgccgtcaa
attgtgtcgcctgaaactgaggatgagcaatcgttcactgctgaacaagatgaaggagca
ttgcgatggacagcgacacaaagtccacatttgtttcagacgtcaaaccagagggtccaa
ggtatgaagcatggaggtatccagcctcagactcaggacagtttcgatctgtttcattct
ccatgcaaatccccagccacctatgctaagcagatttctgaaagtcttggcgcgcaaatt
aatcctgacatttcttggaccagttccttgaatactccaccagcggtgccatccacactg
attttatctaaaagtgatgagagtccctgtccagtgagtgtttctgcagacaaaaaagtt
gtttttgtgcgggagctttttccttctctttcaaacgcttccacagttggagtaccacca
cccaaaaccaatgacatgcctgctggtaatcaaggtactgtttcccctgaggccgaatcc
cccaactccccccaggcttcgctaatccagagtgatggtgtttggcgacagaagctgcca
gatgctattgaagatggagaaattcgcagcaccgtagcaagtatcctcgatggagctgaa
aatgttctctccattttcttcgccaacagcagttcagcacttagaaaagtgaaacctcgc
agaatcaaacggaagcacatcgttcagacagaagaacgcggctgcagctccacaaacacc
tcaacaacaaacaacactgtgcccagtgaagaggcagcagctggtcaggaacctgtcaga
tttccctcatccccactggtaacaactggagacactgccaacagccagtggtctccattg
agtttatctcaaattccaacttttgctgtggatgacaatatttcaaaagaacagctgcag
agtgactctggttgtagcccgtttgtaaggccacctatgaaaatcacagactctgtaatt
aataagaaaaagagaaaattcatctacactgttgggacttttaaaactcaagttcaagga
aaagaaacgcagtctcagaaggtggactcatcgccagggattgcatattctggaccagaa
gtgggtgttaagcagttggagaaagccccagatgacacagactgctccagtaatgggaag
aatgcaatggaagaacagggaaatctggctggagagaatctgcctctgcctccctctgca
caagccaaactccaggatcttgacatgtcacagctttgcagagattttgcacaagacttc
agccaaataccagattctgttaaactgggaaaacaggcagagggcactgagcgttacttt
tctccatcagcctgtctgtcggccatgaaacaaactaagcagaaagcaaaccctcaccgt
ggccttgatgccggtagtaacagaagatgtgtttctaccactgatcagaattactccatc
aatgaaggcaccgtaagtgacagtggattccagtctgctgtggcagatattactcgtatg
actgcatcttcaaatgttcttccctggtcagagaagactggtcaaagtcagcactgttct
ggctttaaaaccgatttctacaggacctttccatctacaaatcaagggaatagaaaagta
catttggatgttaaagctgaaaccgagctcaaggaaagacagacaccggacgccgggaga
aagaatgagttgcacatagagagcatgtcaacaccactaccaagcagtacaaaagaaact
gtcactaacattaactgcactccaataaatgctcagactcatggcagcctgccagacaaa
accgaagtttctattccttctgtccgtgtgtcgggattcagaaccgcttcaaataaaggt
gtacgaatttccttagctaacctggagagagccaagcatctctttgaagagactgaggga
ggaaggagtttaagtgatcagcccaccacatgggaccgtgccatgaatggatcatcgaaa
agtacagcttctaattcaaatcagctaccttccttaagtgaaagatttggggataacagt
taccagttaacagactcacaaaaagctgatgtgacagaactgtgctctctcttggaggaa
gctgatagccagtttgaattcactcaattcaaaaccgcaaagctaaatcagaaagatgat
gccacctctccacaaaaagctgacaaagagctggaccctgattatctcactggaatagat
tttgatgacagctttagttcagacactgaaaagcagcagcctgacaaaatgacttccgtc
tcagatgataaaataaatagtggaacatctgatgccagaagtaaatccacctgtatgtca
ttatcaagtgctccgaaaaaagaaaattcctctgctggagatcgagcttccttttcagag
cacatttctaaaggcgataactgtcgtatgtcaactgaaccaaaatatcctcacagagct
gagtgcactgaaacaacccagctggagaacagaaatcctttgatgcttggtgtagcgttt
aaaactgccggaggaaacgttttgagagtttccaaaaaatgtctgagccaagctagagct
ttgtttgcagatttaggggagaacctgacaggtcagaaatcaccagacgagaaacgcacc
gaaaacgatgctcaaacagaacaaaagtgctgcatggattcgaacgctggcacggacgat
ttgaagtccaccatcaaagacaactgtgatattgaggagagaattcaggagtccgtctgt
tcagacaaaaaggtttcaaccattagagatccagatcgtacgaaatgttttgaaaacagc
aaaatggacacaaccatgtgtcagagtggcttccacatggcgagtggagaagggatttct
atttcagcaaaatatatgcaacaggcaggtgcttttttcaaaggctgtgacgaaatggac
cgtaatgacggcatgtcggggctgagcatagatcctatggctgaaagtgttaacggtaag
aaaaacctttcagaatttaaaaaccctcagaggacaaaagtcaacacttctgaggaacat
gtcagtgggtccgctaagtttaaaaatgcaaatggtgcactggttgcacattacacaaag
gggccacatcctgaacatatggaaaagaacagtgctggttgtaacagtacactggcttta
aaagattcagcggctttccgtgggaaccttttgacttcgaagccattttcttctccgctg
tgcacaacatcaaaggttattgattcctctgcaatagacaaattgagcagtggtgatgga
ttctctgcagccagcgggaagaaagtacctgtgtcagctgaggcaatgaaaagggcggga
tgtctcctgaaagaaatttgtatacttgaagactcaaaaaaacaactgaatcaaaaagaa
aatgctgtcagagacggacagtttaacgctcaaattcgggattctccgcctaagaacgat
ggattccacaccgccggcgggaaacaaatctccatttcatctgcagctctcaagaaagca
aaatccctgctaagtgaggctgatgaagatgcgtatgaaagcggtgtaaatccctcttct
actttcaagattccagctcatgctccaccacccaggaatgctggatttcttgcagccagt
ggcaaaactgtggcgctttcatctgaggccttacagaaggctaaagctctcttcagtgac
accagcttgagtacagacatcccagctgtttccgatgcaaggaggagtgataagaagcaa
gacagtagtgaaaatacagagaaaatacactgtggtttctcaactgcagggggacaaaga
gtccacgtgtcacagaaaactcttttgaaagcaaaacatcttttgagagaatgtgatgat
tctgcttcaacagaagcaatgcaagaagcagatgctttcatcaaagactgtgataaggac
tggaacagtggaattgccctcaaacataaaagtgtggcacctgtcaaaggaagtggcaca
gagaaaagaaaccttttgaatttcaaaccagatcaaagggtgtcggtaaacatttctgag
gagcctggaaatggaaaagatacaagcacagcagtgaaacaaagagaagacactttgaac
ggtggatttcagacagccagtggaaaacgagtggccatttcatctgccgctctcaagaaa
gcaaaatccctgctgagtgagggcgatgaagaggagcaacaaatcagtgtaaaaccattt
tccactttcaagattccagctcatgctccgccacccaggaatgctggatttctttcagcc
agtggtaaaactgtggcaccttcatccgaggccttacagaaggctaaagctctcttcagt
gacatcagcttgagtacagacatcccagctgttacagaaacaaggaacgtgagtggaagt
ggcagcgagaagagaaacctttcaaaatttaaaccagatcaaggggtgacggtaaacgtt
tctgaggagcctgaaaagggatccactgaagatacaaacaaaccggtgaaacaaagagac
gacactttgccgccacagagcggcggattccaaacagccagtggaaaacaagttgctatt
tcatctgcagctctcaagaaggcgaaaactctgctaagtgaatgtgaaggagttgaggat
gaaatagatgtaacaccgccaccacattctgagactccagttcctggtccgtcgttcagg
aatggtggctttctcgcagccagtgggaaacctgtggcactttcatctgaggccttaagg
aaggctaaagctctcttcagtgacatcagctccagtccagacatcccagctggatcaaac
acaagcaggagtgataagaaacatgaaggagatgctcaaaatgatgcagaaaaaaaacat
ggtggtttcagaactgcagggggagcaaaagtccacgtgtcagagaagagtcttctgaaa
gcaaacaagcttttcaaagagttggctgatggggagtgtcatggttcaacaagcccgcat
gacaccaataaggtagatccatcgaaagtgatagatatgaagagaacttcagattctaat
cgtaccaccaccagtgacaagaacatgtccactaagggaagtgcctctttggtggttaaa
tatttcccctctctgcaagagaccgaccgtggaaaggaaactattaaaagttcaggtcat
ggtggttgtagctttatcaaagacgaggcacttacagatgcagttaagttccaagaagat
aaaagcagcccatcgggggtgggaaaccaacacgacagctgtgaacaggacgcttcatgt
gcgtcggactatgaaatgaatcaaacaggcagcagcgagggatataaagttcaaatccca
gcagagtccacaggtctaaactttcaatcagtcaacctcactggctgcacagagactcag
cagcagtttcttgcccaggaagctctggactgcactaaagccttgcttgaagatgaaggt
ctcgctggccaaatgactttggaaaacatggcactgcaagacaagccaaagtccagcaac
agatctgcagaggaagagaaaagaagagggaagagatcagtggaagctgcagatataact
ggtcagcctcctctgaagagacgattacttgaagacttcgacagggtggttgatgggccg
agatgttcaacactccatgcagtaaaaagctgtccaaatggtgtaatgaaagacaggagt
gttttcaagtacagtgtcgctcttcatccaaacatcacaaggccacacgggagtggtaaa
aactatgtggaaacgagatttcaaaagacaacactcaaacaaccctcaaccccctcagag
agcagatcaactccttccaagacgccggcatttgttcctccattcatcaaaaatgtaaaa
gcagacactctcaaggacaacgtaaggacgactgctgcgtttgttcctccgttcaagaaa
caaagaacgattatccaagagacctcctctaaaccacaggagcaggaggataaatacctg
cgtctctttgtaagcaacacttacgtaccgcccactaaaaatacaccaggtgctactgat
gtaactgcccccgtcgacacgacaagtaacaatgtgctgaataatcagagcactctggtt
gtctgtgggtcaggcagttcagaggcatcatgtgcggatgagacgtcctccagaagccaa
gaatatcagactcttgggaacactgagctggcacgggacgtacaagacatgaggatcagg
aaaaagaagcgccagaccattcgacctctgccagggagtctgtttctaaccagaacctgt
ggagtggcgaggatcccattaaaagtggcagtggatggaaagcccccagcaagatacacc
caaaaacagctgtatggatttggagtccataagcacgtttctgagatcaccagcgagact
gcagagtctttttgctttaatttgctgcagttcatcaaacgggaagccttaacagaggat
ggtggtattcagctggcggatggaggatggctgattccccgcaatgatgggactgcagga
aaagaagagttctatagagccttatgtgacaccccgggtgtggatcctaaactgatcagt
gaggcgtgggtgtataatcacttcaggtggattgtgtggaagcagtcatccatggaaaag
tcatttccagaaacaatgggcagcctctgtctcacccctgagcaggttctcctacagctg
aagtacagatatgatgtagaagtggaccacagccgcaggccagctctgaggaagatcatg
gagaaggacgacacagcagccaaaactctggttctctgtgtgtgcgaggtcgtctccggg
ggtcacaacgacaccaggactccacaaggtgccgatgccaagcctgaagctcggtctgca
gtcgtttggctgacggacggttggtacgccattaaagcccagctggatgaaccgttgacc
gccatgctccacagagggagactggctgtcgggggcaagttgatcgtccacggggctcag
ctggtgggaccacaagaagcctgcgcccctctggaggccccagagtctctcatgttaaag
atttgtgccaacagcagcagacccgcacgctgggatgtgaaactgggatttcacaaggat
ccgcggccgttcctgcttccagtgtcctgtttgtattgcaatggaggaccagtaggatgt
gttgacattgtcatactgagaagctaccccatacagtggatggagaggaaagcagacgga
ggtgctgtgttccgttctgctcgtgcagaagagaaggaggcgagacgatacaacagccac
aaagaaaaagccatggagatcctttttgccaaggttcaagctgaatttgaaaaggaggag
aaaaggaatttaaaacctcagcggagaagacaaacattcagtcatcaggttattgccagt
ctgcaggatggagaggagctgtacgaagcagtaggagatgacccagcttacctcgaggct
catttgagtgaaggacagttggagactcttcatacctacaggcgctctctgatggagaag
caacatgctgaactgcaggatcgatatcgtcgcgctctcgaagcagaggacaacgaccag
agctgtcccaaacgagacgtcgcacctgtgtggagacttggcattgctgattctttggac
caaaccggcagtgtctaccggttgaatctttggcgaccttcctcagaccttcagtcttta
ttgaaggaaggctgtcgatacaaagcctacaacctcaccgcttcagatgggaagaaccgc
agcagtattcaaaatgttcagctcacagggacaaagaaaacacagtttcaggagctgcag
gcgtcccaggagtggttgtcggcacgttttaaaccgagagtctctacaaacgttgtgagt
cttcaaaactctgagttccagccgctgtgtggagaggtggatctcacaggatgtctcgtc
agtatcatagatggacagggttcttctccggccttttatttggccgacgggaaactgaat
tttgtgaaagtccgctgtttcagcagcttgtctcagtctggcctggaggatgtgctgaaa
ccaggtgtcctgttggctgtgagcaacctgcagctgagaggccagtccatgtatcccact
cctgttgtgtatgctggagatctgactgtcttctctgcaaaccccaaggaagttcatcta
caggagtccctcagccaactcaaaaacctggtccagagtcaagagaacttctttctaact
gccgaggagaagctttcacttttagttaaatctgacggcgtgagctcgatctgctctcct
gctctgcaaccacagactcctgctcctccaacagacagaagacaagactcaaagacaagt
gtgatttctcagaagccaatcagaagcctcggatctttcacacctgtcagcagaaacccg
atggcagcaacatcctcaacagaaaaagatcccaaaagcctgaaaagaaggcgagctgtg
gactatctgtcacgtatcccgtctcctcccccactcttcaatctgagctcatcggcttct
ccgtgtgtcaataagacattcaacccccctcggaggtcgggcacatctagcactttaaaa
actgtacagactccagctcacaaacccgtcgactcaccgcgggagggcgaatgggtgaat
gacgaggagctggccatgattgatactcaggcattgtgtgttggtgaattactgtag
DBGET
integrated database retrieval system
