Embiotoca jacksoni (black perch): 138205405
Help
Entry
138205405 CDS
T10523
Symbol
lrfn1
Name
(RefSeq) leucine-rich repeat and fibronectin type III domain-containing protein 1
KO
K16354
leucine-rich repeat and fibronectin type-III domain-containing protein 1
Organism
eja Embiotoca jacksoni (black perch)
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
eja04515
]
138205405 (lrfn1)
04990 Domain-containing proteins not elsewhere classified [BR:
eja04990
]
138205405 (lrfn1)
Cell adhesion molecules [BR:
eja04515
]
Immunoglobulin superfamily
SALM family
138205405 (lrfn1)
Domain-containing proteins not elsewhere classified [BR:
eja04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
138205405 (lrfn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
LRR_1
LRR_5
Ig_2
fn3
ig
LRR_9
Ig_DSCAM-DSCAML_C
C2-set_3
DUF4834
Sp38
Motif
Other DBs
NCBI-GeneID:
138205405
NCBI-ProteinID:
XP_069017503
LinkDB
All DBs
Position
Unknown
AA seq
760 aa
AA seq
DB search
MDRLVLCLLLCAAVVKGYSCPGRCICQHLSPTLTLLCAKTGLLFVPPTIDRRTVELRLTD
NFITIIRKKDFFNMTSLVHLTLSRNTISQITPHAFFGLRALRALHMDGNRLSVIKSDHFK
GLINLRHLILGNNQIHQVAPTSFDEFVSTIEDLDLSNNNLRGLPWEAIAGMTNINTLTLD
HNLIDHIGAGTFTLLTKLVRLDMTSNRLQKLPPDSLFQHAQVLSDAKGSSSSTLAVSFGG
NPLHCNCELLWLRRLTREDDLETCASPEHLMDKYFWSIQEEEFICEPPLITKHIATKPYV
MEGQGVTLKCKAVGDPDPDIHWQSPDGKLVPNNSRTILYDNGTLDILITTLKDSGAFNCV
ASNAAGIATAAVEINMIPLPLFVNNTGHMREDPGLSDITTSSKSGNDTKGYDKQDRRVMV
TELTSSSAVIRWPSERHIPGIRMYQIQYNSTADDTLVYRMIPSTSKNFLINDLAAGREYD
LCVLAVYDDGITSLTATRVVGCVQFHTASEVSQCRFMHSQFLGGTMIIIIGGIIVASVLV
FIIILMIRYKAYSSPEDSKTKVSSSMHSQTNGSQQRLQRSTSKQPSDEGLREAPAPKECM
ALVLRVDSDKKEHPAAATTTTILEVELPPLATDKMKRRTSLDAQRSGPPSEDTQTDSSLT
GSTMSLCLIGPNAGTKEAPRLKDKKSTLANMGLLPNELARTRHRFSFDGGDYSIFQSHSY
PRRARTRWHKSTNQLNMESSPLANRRVTFSSTEWMLESTV
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggaccggctggttctgtgcctgctgctgtgtgcagctgtggtgaagggctacagctgc
cccggccgctgcatctgtcagcatctctccccgactctgacgctgctctgtgctaagacc
ggtctgttgtttgtcccccccaccatcgaccgcaggactgtcgaactgcgactcacggac
aactttatcaccatcatccgcaagaaagactttttcaacatgactagtttggtccacctc
accttgtcccgtaacaccatcagccagatcaccccgcatgccttcttcggcctgcgtgcc
ctgcgggcgctccacatggacgggaaccgcctcagtgttataaaaagcgaccactttaag
ggcctcatcaacctgcggcacctcatcctcggtaacaaccagatccaccaggtggccccc
acctcctttgatgagtttgtttccaccattgaggacttggatctgtccaataacaacctc
cgtggccttccctgggaagctatagcgggaatgactaacattaacacgctcacactggac
cacaacctgattgaccacatcggagcggggactttcacactgctcactaagctagtccgc
ctggacatgacctccaacaggctgcagaagttgccgccagacagcctgttccagcacgct
caggtcctgtccgatgccaaaggctccagctcatcgactctggccgtgagttttggcggg
aacccccttcactgtaactgcgagctgttgtggctgcgcaggctgacgagagaggacgat
ctggagacctgtgcctcaccagagcacctcatggacaaatacttctggtccatccaggag
gaggagtttatctgtgagcctccgctgatcaccaaacacatcgccactaagccctatgtg
atggaggggcagggtgtgacccttaaatgcaaagctgttggtgatccggacccagacatt
cactggcagtctccagacggcaagctggtgcctaataactcccgcaccatcctgtatgat
aatggcacccttgatattctcatcaccacgctgaaggacagcggggcatttaattgtgtc
gcctccaacgccgcaggcatcgccacagctgctgtcgagatcaacatgatccccttaccc
ttgtttgtcaacaacacgggccacatgcgtgaggaccccggcctctccgacatcaccacc
tcctccaaatcgggcaatgacaccaagggttacgacaagcaggacaggagggtgatggtc
accgagctgacctcctcctccgccgtgatccgctggccatctgagcgccatatccccggc
atcaggatgtaccagattcagtacaacagcacagcagacgatacgctggtgtacagaatg
atcccatccaccagcaagaacttcttaatcaatgatctggctgcgggacgggagtacgac
ctttgcgtgttggcggtgtacgacgacggcatcacatcattaacggccacgcgtgtagtt
ggctgcgtgcagttccacacggccagcgaggtgagccagtgccgcttcatgcacagccag
ttcctgggaggcactatgatcatcattatcggcggtataatagttgcttcggtgctggtg
ttcatcatcatcctgatgatccgttacaaagcctacagcagcccggaggacagcaagacc
aaggtcagctccagcatgcactcgcagaccaacggcagccagcagcggctgcagcgctcc
acctccaagcagccctctgacgagggcctgcgtgaagccccggcacccaaggagtgcatg
gcgctggtgctgagggtggacagcgataagaaggagcatccagcagccgccaccaccacc
accatcctggaggtggagctgcctccgctggcgacagacaagatgaagagaagaaccagc
ctggatgcacagcgctccggccctccgtccgaggacacgcagacagacagtagcctgacg
ggctccaccatgtccctgtgtctcataggccccaacgctggcaccaaggaggctccccgg
ctcaaggacaagaaaagcaccctggccaacatggggctgctccctaatgagctggcacga
actaggcacagattctccttcgacggtggggattactccatatttcagagtcacagttac
ccacgcagagcgaggacgaggtggcacaagtccaccaaccagctcaacatggagtcatcg
ccgctcgccaacaggagagttacgttcagcagcaccgagtggatgctcgagagcacagtc
tga
DBGET
integrated database retrieval system
