Embiotoca jacksoni (black perch): 138205419 Help Entry 138205419         CDS       T10523                                  Name (RefSeq) collagen alpha-2(I) chain   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism eja  Embiotoca jacksoni (black perch) Pathway eja04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:eja00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     138205419  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:eja00536]     138205419 Glycosaminoglycan binding proteins [BR:eja00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    138205419 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI Laminin_G_3 Laminin_G_2 Laminin_G_1 DUF6215 Motif Other DBs NCBI-GeneID:  138205419 NCBI-ProteinID:  XP_069017538 LinkDB All DBs Position Unknown AA seq 1805 aa AA seqDB search MLLRLLKWTVCLLALLKTSTASPDDAPVDSGGESGSGMLQTDEVNILQELSLQLSNSSNA SMTVGDSRCPILQVGQYSTLALPLRQLFTDGFEDEFSLLVQLRSPQRDERSVFTMLSPDS HIMLQLRISAFGIIFIGTQQRHYEFPVADLSDGKWHHVAVSVSVKRLALYVDCSLLENVD WVYHGMGISTDGLLMVGGIIDGFETPFEGHLRQLAFLMGDPDAAKQHCSHHPPRCRVRAP KPPHSPRTIVANQLCDHLQRNDLPRGDGTLPSRPNRKGSIGRADVFVVDEDTDLLDPIFQ NGGQVNPQWKPSRNGPKGSQKGKPELSSKNVEENITTEKKTDSSGRTPSLFPRKPTDDII DLDVGNSPKKPSLVIPVPPKIPSGPGTSTDSDKPGEETEQVQTVSPPPHVIIPAASTKSV VVEGSPVTTQSTTPHVAKQPDKDRPGIVTIVSRDGDLALGSDGKMYRLQRGTPGRMGPPG QEGCPGDPGLPGLKGDKGKTGPEGSPGSKGELGPPGPLGLPTFYLWKNTAEEWAAFQQTN FYQLLRSGWPSNEGPAGPPGEMGKPGRQGPPGEPGERGQPGMPGEMGDRGAGGPPGRAGT PGRDGENGEDGQPGSPGDPGSQGPWGYRGERGSKGEKGDEGLVGLKGPRGEIGEPGEKGA SGLPGQRGPVGPPGPQGIRGGSGPEGPPGSDGESGLDGPPGQPGLPGAPGFTGQVGAQGV NGSRGELGPAGSVGSKGPQGPPGLEGQMGPPGLRGPQGHPGLLGAPGPKGDLGPVGPMGA RGDLGFEGPMGAPGSRGHVGFPGVTGKRGPDGDMGDPGSKGDKGIQGPAGIRGPQGERGP IGFPGFTGVMGQPGPRGIEGTNGETGPQGKQGSRGLKGNRGPDGRTGKPGPRGNKGWIGQ KGHTGQPGPSGLPGTPGPEGAEGKPGTQGPAGAAGSAGSKGSTGFQGIAGKRGADGPTGS LGPPGKTGPPGSTGPPGDRGFTGKPGMEGPQGPVGMYGIQGNVGMRGTPGFIGERGKPGL RGLPGPVGKLGPSGLPGPAGEKGPQGSQGRPGDEGPKGIQGPPGPSGLPGSNGAIGKPGP RGSKGPPGPQGPQGPAGIPGPQGADGLLGAAGEKGNKALPGSPGDAGPTGPGGEQGLPGQ TGIEGPPGQKGDRGDLGPCGKSGPQGLAGERGLEGTKGLQGPQGPIGKEGDVGHPGEAGD AGPKGEKGEVGPVGFSGREGAWGAIGDNGNRGPKGDKGHIGLMGEPGLMGEVGPAGLAGL QGITGSPGPPGTDGAQGEKGKSGPVGIIGPLGSKGPLGIDGPRGVRGDTGRLGPPGPVGQ AGPQGNQGATGESGTQGLKGEPGAPGPPGEQGEDGLPGIRGPPSLPGFEGPPGEMGHRGL PGPAGAPGAQGRPGPDGKQGMKGEKGDDGEIGSPGKTGPAGRKGKRGKAGVRGTRGDRGP KGEKGDTGPAGLLGWSGLIGIPGLRGELGDKGEKGKEGGKGDMGVPGPPGGDGMKGIRGP AGLPGPVGLKGEQGNIGRPGQRGTPGMPGFPGLFGLKGLKGYSGLPGLPGRRGLPGPPGI PGPPGQSLNMTLTQLKDMMYMSDKPNYLLIQTLLDSMQQELRVLLDPPDGSKERPATTCL ELWLCHPDYSSGMYYIDPNQGNPADALLAYCSFSSASTQTCLHPRDSQMPMKAWMEDFSE GGSFQWLSKLDQGFQFYYPGANVVQMRFLRLHSSTAVQKVTYSCHPGHRLGQTDRDIKFL TDTRKQSYLGALKDCVPRDETVTGPRESVFEFEDLHLLPLRDVALMGGGNFTHQFGISVG PVCFS NT seq 5418 nt NT seq  +upstreamnt  +downstreamnt atgttgctgaggttgttgaaatggacagtttgcctcctcgcgctcctgaagacgagcact gcctcacctgacgacgcgccggtggactccggaggcgagtccggttccgggatgctgcaa acagatgaggtgaacattctgcaggagctttctcttcagctgtccaacagcagtaacgcc tccatgactgtgggggacagcaggtgtcccatcctccaggttggacagtactccaccttg gctctgcctctgagacagctctttactgatgggtttgaagacgagttcagtttactggtg cagctgcggagtcctcagagagacgagcgcagcgtcttcaccatgctcagccctgacagc cacattatgctgcagctgcggatcagcgctttcggcatcatcttcataggaacgcagcag cgacactacgagttcccagtcgccgatctgtccgatggaaagtggcaccacgtggctgtg agtgtgtctgtgaagcggctggcgctgtacgtggactgctctctgctggagaatgtggac tgggtgtaccacggcatggggatcagcaccgacgggctgctcatggttggaggcatcatt gatggctttgagaccccatttgaaggtcatctccgacagctggccttcctgatgggtgac ccagatgcggccaagcagcactgcagccaccacccacctcgctgtcgtgtgagagcgccc aaacctcctcactccccacgcaccattgttgcaaatcaactttgtgatcatttacaaagg aatgatcttcctcgaggggatgggacactgccttcaagaccgaatcgcaaaggttcaatc ggtcgagcagatgtttttgtggtggatgaggacacggacttgttggatccgattttccaa aatggcggacaagtaaaccctcagtggaaaccttccagaaatggacctaagggaagccag aaggggaagcctgagctatcgtctaaaaatgtggaagagaacattaccactgagaagaag acagattctagtgggaggactccatcgctgttccccagaaaacctaccgatgatatcatt gacttggacgtcggaaattcccctaagaagccatcgttggtaattcctgtgcctcctaag attccttcaggtcccggaacatccacagactctgacaaaccaggagaggaaacagaacag gtccagactgtttcacctccacctcatgtcatcatacctgcggcatctacaaagtcagta gttgtcgaagggagtcctgtcaccacgcagagcactacaccacatgttgctaaacaacca gacaaagaccgaccgggaattgtgaccattgtatccagagatggagacctagccttgggc tcagatggcaaaatgtaccgtctccagagagggacaccgggcagaatgggtcccccaggg caggaaggctgccctggtgatcctggcctccctgggttaaaaggtgacaagggtaagacc ggccctgaaggaagtccaggaagcaagggggagttaggacctcccggaccactgggttta ccaaccttctacctgtggaagaacactgctgaagaatgggctgctttccagcaaaccaat ttctaccagttactgcgctctggttggcctagtaatgaaggccctgcaggaccacctgga gagatgggcaagcccggaagacaggggccgcctggtgaacctggtgagcgaggacaacca gggatgccaggagagatgggtgatcggggcgccgggggtcctccaggacgagccgggacc ccagggagagacggggaaaatggagaggatggtcagcccgggtcacctggtgaccctgga tcacagggcccgtggggatatagaggggagcgagggtccaaaggggaaaaaggtgatgag ggacttgttggcctcaagggtccaagaggggaaattggtgaacctggtgagaagggcgca tctggtttacctggtcaacgcggtcctgtcggaccaccagggcctcaggggatccgaggt ggctccgggccagaggggcctcctgggtctgatggggaaagcggactggacggccccccc ggtcagccagggctaccgggagcaccaggttttacaggacaagttggcgctcaaggagtt aatggctcaaggggggaattgggacctgctggcagtgttggctccaagggtccacagggg cctccaggtttagagggacagatgggacctccaggactcagaggaccccaaggccatcca ggactgctaggagctcctgggcctaaaggagatctcggtcctgtggggccgatgggtgcc cggggggacctcggctttgaggggccgatgggtgctccaggcagcagaggtcatgtgggt tttcctggagtgacgggtaaaagaggaccagatggggacatgggtgatcccggatccaaa ggagacaaaggtattcaggggccagcaggcattaggggtcctcagggagagaggggcccc attggcttccctggttttacaggagtaatgggccagccgggccctcgaggcattgagggc acaaatggtgaaactggcccacagggaaaacagggcagccgggggttaaagggtaacaga ggaccagatgggcgcactggcaaaccgggccccagagggaacaagggttggatcggacaa aagggccacacgggccaaccgggcccatcgggtttgccggggacacctggaccagaggga gcagaaggaaagcctggtacacagggtcccgcgggtgcagctggcagtgctggcagtaaa ggatcgacgggctttcaaggaattgctggcaagagaggagcggatggcccaacaggttct ctggggccaccagggaagacggggcctccgggctcaacaggacccccaggagacaggggt tttacagggaagccaggaatggagggacctcagggcccagtaggcatgtatggtatccag gggaatgtgggcatgcgagggactccaggtttcatcggagaaaggggcaagccaggttta cgaggtttaccgggacctgttgggaagctgggcccttcaggtctgccaggtcctgctgga gagaaggggccccagggatctcagggccggcctggagatgaaggacccaaagggatacag ggcccaccagggccttcaggcctcccaggttccaatggggcaattggaaaacctggaccc aggggaagcaaagggcccccaggacctcagggtcctcaggggccggcaggaatcccaggc cctcagggtgctgatggattattaggagcagcaggggaaaaaggaaacaaggcactacct ggttcacctggtgatgcaggccccacgggaccaggtggagaacagggtcttcctggccaa acaggcatcgagggcccacctggacagaaaggagaccggggagacctcggtccttgtggg aaatctggtcctcaagggcttgcaggcgagagaggacttgagggcacgaaaggcctgcag ggaccacagggaccaatcggcaaagagggggatgtcgggcatcctggtgaagctggagat gctggacccaaaggggagaagggtgaggttggacctgttggtttttctggccgagaggga gcctggggagccattggagacaatggcaacaggggtccgaaaggcgataagggccacatt ggactgatgggagaaccggggctgatgggtgaagtgggccctgcaggtctggcagggtta cagggaattacaggttctccagggcctccagggacagatggagctcagggagagaagggg aagtctgggcctgtaggaattattggacctctgggatcaaaaggcccactgggaatagat ggacctcgaggtgtcagaggagacaccgggaggctgggaccacctggtccagtaggacaa gctggacctcagggaaaccagggagctacaggagaatccggaacacagggactgaagggg gagccaggtgctccgggcccaccaggagaacagggtgaggatgggcttccgggaatccga ggtcctccatctctgccagggtttgaggggccgcctggagagatgggacaccggggtctc ccaggtcccgcaggggctcctggagcgcaaggaagaccaggaccagacgggaagcagggc atgaaaggggagaagggagacgatggtgagattggatcaccagggaagacgggtccagct ggaaggaagggtaaacgggggaaagccggagtcagagggaccaggggagacagaggacca aagggcgaaaaaggagacacgggaccggccggcctcctcgggtggtcagggctcattgga attcctggcttacgtggagagctgggggataaaggcgaaaaggggaaagagggtgggaaa ggagatatgggagtacctggaccacctggaggggatggcatgaagggtattcgtggtcca gctggattgccaggtcctgtgggcctaaagggagaacagggaaacattggtcgaccagga cagagggggacaccggggatgccgggattccctggtttgtttggattaaagggtttgaaa ggatactcaggtctgcctggactgcctggcaggagggggctcccaggtccacccggcatt cccggacctccaggacagtcactgaacatgaccttgactcaactcaaggacatgatgtat atgtccgataagcccaactaccttctgatccagacactgctggattctatgcagcaggag ctccgggtgctgctggatccccctgatggcagcaaagagcgtccagccaccacctgtctg gagctgtggctctgtcaccctgattacagcagcggaatgtattacattgaccccaaccag ggcaacccggctgacgctctgctggcgtactgcagcttctcctccgcatcaacacagacc tgccttcatcctcgagactctcagatgcccatgaaagcttggatggaagacttttctgag ggaggatcttttcagtggctcagcaagctggatcagggatttcagttttactatccaggt gctaacgtggtccagatgcgctttctgaggttgcacagcagcactgctgtacagaaggtg acatactcgtgccatccaggacacagactgggccagacagacagagacatcaagtttctc accgacacgagaaagcaaagttacctcggagcacttaaagattgtgtgcctagagatgag acagttactggtcctcgggagtctgtgttcgagtttgaagacctgcacctgcttcctctg agagacgtggctctaatgggaggaggaaacttcacacaccagtttggcatcagtgtcgga cctgtgtgtttcagctag

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