Embiotoca jacksoni (black perch): 138205708
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Entry
138205708 CDS
T10523
Symbol
roraa
Name
(RefSeq) nuclear receptor ROR-alpha A isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
eja Embiotoca jacksoni (black perch)
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eja03000
]
138205708 (roraa)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
eja03310
]
138205708 (roraa)
Transcription factors [BR:
eja03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
138205708 (roraa)
Nuclear receptors [BR:
eja03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
138205708 (roraa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
138205708
NCBI-ProteinID:
XP_069017979
LinkDB
All DBs
Position
Unknown
AA seq
519 aa
AA seq
DB search
MESPPDPASDPGNSASEPATPVRETPVNLETLRKADHPAPVRRQTCSSTNRGISVTKKTH
TSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNAAYSCPRQKNCLIDRTSRNR
CQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQQQRDHQQQPGEAEPLTP
SYGLSANGLTELHDDLSGYMDGHTPDGSKPDSAVSSFYLDIQPSPDQSGLDINGIKPEPI
CDFAPGSGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHMETCQYLREELQQMTWQAFL
QEEVESYQNKPREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVV
FVRMCRAFDSQNNTVYFDGKYAGPDVFKSLGCDDLISSVFEFGKNLCSMHLSEDEIALFS
AFVLMSADRSWLQEKVKVEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRALCSRH
TEKLTAFKAIYPDIVRAHFPPLYKELFGSDFEQSMPVDG
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggagtcccctccagatcctgcgagcgacccgggcaacagcgcctcggagccggctacc
ccggtcagggaaaccccggtaaacctggagacgctccggaaagcggaccatccagccccg
gttcgaaggcagacctgttcaagcaccaacagaggtatctcagttacaaagaagacacac
acttctcaaatcgaaataattccctgcaagatctgtggagacaaatcatcaggcatccat
tacggcgtgataacatgtgaaggctgtaagggcttcttcaggaggagtcagcagagcaat
gcagcctactcctgcccccgtcagaagaactgcttgatcgaccgcaccagccgcaaccgc
tgccagcactgccggctgcagaagtgcctggcagtgggcatgtcacgagatgcagtgaag
tttggccgcatgtcaaagaagcagcgagacagcctgtacgctgaggtccagaagcaccgg
ctgcagcagcagcaacgtgaccaccaacaacagcctggagaggcggagccactcacacct
agctatggtctctcagccaacggcctcacagagctccatgatgacctcagtggctacatg
gatggtcacacccctgatggcagcaaaccagactcggcggtcagcagcttctacctggac
attcagccgtctcccgaccagtcaggcctggacatcaacggcatcaagccggagcccatc
tgcgactttgcccctggctctggcttcttcccttactgctccttcaccaacggagaaacc
tcccccaccgtgtccatggctgaactagagcacctggcccaaaacatctctaagtcgcac
atggagacatgtcagtacctgagagaggagctgcagcagatgacctggcaggcattcctg
caagaggaggtggagagctaccagaacaagccccgggaagtcatgtggcagctgtgtgct
atcaaaataacagaggccattcagtatgtggtggagtttgccaagcgcatcgacggcttc
atggagctgtgtcagaacgatcagatagtgctgctgaaagcaggctctttggaagttgtg
tttgtcagaatgtgccgtgcctttgactcgcaaaacaacacagtctattttgatggaaaa
tatgccggacctgatgtgttcaagtcattaggctgtgacgacttgatcagctccgtcttc
gagtttggaaaaaacttgtgttctatgcacctgtctgaggatgagatcgccctgttctcc
gcctttgtgttgatgtctgctgaccggtcctggctccaggagaaagtgaaggtggagaaa
ctccagcagaaaatccaactggccctccagcatgtcctgcagaagaaccacagagaggat
ggtatacttacaaagttgatatgcaaagtgtcgacactgcgagcgctgtgcagtaggcat
acagagaagcttacagctttcaaagcaatatacccagacattgtgcgtgcccacttcccc
cccttatacaaggagctgtttggatcagactttgagcagtccatgcccgttgacgggtag
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