Embiotoca jacksoni (black perch): 138205905
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Entry
138205905 CDS
T10523
Symbol
tdrd12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
eja Embiotoca jacksoni (black perch)
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
eja03036
]
138205905 (tdrd12)
Enzymes [BR:
eja01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
138205905 (tdrd12)
Chromosome and associated proteins [BR:
eja03036
]
Eukaryotic type
Gene silencing
piRNA pathway
138205905 (tdrd12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
Helicase_C
CS
Motif
Other DBs
NCBI-GeneID:
138205905
NCBI-ProteinID:
XP_069018365
LinkDB
All DBs
Position
Unknown
AA seq
1399 aa
AA seq
DB search
MLKISILKVDNPSCLWGRVVRGPGNDTDTTEDYNNLLAQMNLFYHDVTRDLHRLKPNVLE
EGQVCVLYWEGIKSWCRAVVESIFMDSISCQARCLLVDYGERLIVPSDQIRVVMQNFLQL
PFWVRKFHLAGIEPTTMHVSLYEETAELIPSRQWDSSATLYLHNLLQASTQTEAVLRESE
PESTSVNLYLTVGNIKICVNDELVAKKFAYYTRASSDCGGLDEGDRLPVMLSSSILTLTV
STASNKLTAQNQPSAVTSQSSATASAGDWLTAASAPQSQWHSLVTSEGDQRSKVTGEPPS
PSSQSSNSLDAAAPESDSSEDTDSSLAAALTKNLSLFRFLKFLNPGSSYQQTALSAGLNE
ELNDCRPPEMTAASNTLMPLHKSEPVTPDEQASIHTSNQKRGVEDLLESSQVEHLAAGDS
SSTSRSVASGLAVETQRTEEDWACSRLLEWLNPKPLNRDPDAADDVAAPSDPRRSGILVH
SALPVEPCKSLQDAPITEALRSVLRRKQYGSLSPADCYGWPAVARGCNTVIVSHNADRPL
SYLTPLLTHILLNSIFTSPTSSSGPIAVLLCPGWEKVQAVYDLLEESKVAHILHPVSVLL
GIGKDEARAVKIPKNCLLLVTTPFSLVRLLSCHCFLFLRLYHLLLDEADQLFALAPDEMT
TILQHFQKVTSSEQKASCPQQLVAMAKRWTSHMEGLLANHMPYPCVVITVPEEAALYGNV
QQVILMTLESSKISVLLGALDFNTDVGQKTLIVANSVQEVEDVFKAVSNKSAFCLKTHEG
LTHQFDFVIQQWRKDIGPGTHVILVTTNECLKCLGIRDATCVVHYGFPTSPKLFGSRLFC
MAANFRNLSERHQTESCPRVTRSVLLISERNARHIVGVLRYLGRSDAPLPSELLSFAQGV
HAAREDQKTNRPLCSCLKSLGVCRDSSVCPDRHRFISKLDQSELPAAGVIEVVPLFIKTA
SVFYGRIVRKEDGGFDIMASEMASYYADKKPAAQELLDGGLYAVQEDEVFHRVRVLSVPD
RRGRLFFSVFVRFIDVGKEEEVKSHQVLQLPEQFHSLPGQAVEIIVCRVKPVDAETDWHP
KVTRAISQKIHGLQHRARAVLSLGNTVFLDPMVRLTQVPGMKTIINEYSVQSEILNTGMG
VSNPEHLELLKALCQEGAAGSGRQAGHAPADGLPSLEVRIKAQEDVLAEAFRVAKVGTLA
DPDLPHLEPCEPLNPSTNQNLLQAPPAPELHPDPPCDQKSQLEKQTDDGRTNSHPADLKS
VEQMESFHPQVRWYQTSDSATVTVKLTNPERQRCHFYPDRVVYSGSVDGRSYRADLQLHQ
NIAADRCCWEMKSNEPVLKLVKQQRGHWERFLRNKNIFVSYDMEHIDEEEDGASNGVWFV
ENTGKDNWYVNSESGSESD
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaaatatccattttgaaggtggacaacccgtcgtgcctctggggcagggtggtt
cggggtcccggcaacgacaccgacaccacagaggattacaacaacctgctggctcagatg
aacctcttctaccacgacgtcacccgggacctgcatcgactgaagcccaacgtgttggag
gagggacaggtgtgtgtgttgtactgggaggggattaagtcatggtgtcgggcggtggtg
gagtcgatcttcatggactcgatatcctgtcaggctcgctgcctcctggtcgactacgga
gaacgactcattgttccctcagaccagatccgagtggtgatgcagaacttcctgcagctt
cctttctgggtgaggaagttccacctggcaggaattgaaccaacaactatgcatgtttct
ttatacgaggagacggcagagctcattccatccaggcagtgggacagctcagcaacactc
tacctgcacaacctgctgcaagcgtcgactcagacagaagctgtcctgcgtgaatcagag
ccagagtccacctccgttaatctctacctgactgttggcaacatcaagatctgtgtgaac
gacgagttggttgcaaagaagtttgcatattacacccgagcgtcttctgactgtggcggc
ctggacgagggggaccgacttcctgtcatgttgtcctccagcattttaaccctgactgtc
tccacagcctccaacaagctgacagcacaaaaccaaccatctgctgtgacatcacagagt
tcggcgacagcctctgcgggggattggctgacggctgcctctgcacctcagagccaatgg
catagcctggtgacctctgagggagatcagaggtcaaaggtcacgggagaaccaccgtct
ccaagcagccaatccagcaatagtttggacgctgctgctccagagagtgactcttcagag
gacaccgactcgtctctggctgcagctctgaccaaaaacctgagtctgttcaggttcctg
aagttcctgaatcctggcagcagctaccagcagacagcactcagtgccggtctgaatgaa
gagttgaatgactgtcgacctccggagatgactgcagcctccaatacattaatgccgtta
cacaagagtgagccagtaacccccgacgagcaagcatcgattcatacgagcaatcaaaaa
cgtggagtggaagatctccttgagagcagtcaggttgaacatctggcagctggagattca
agcagtaccagtaggtcggtagcgtccggactagctgtggagacccagaggactgaggag
gactgggcctgttcacgcctgctggagtggttgaacccaaagcctctgaaccgggatcct
gacgctgcagacgacgtggcggctcccagtgatcccaggaggagcggcatcctggtgcac
tcggccctcccggtggagccctgcaagagcctgcaggacgcccccatcacagaggctctc
cgctcggtgttgcggaggaagcagtacggctcgttgtctccagctgactgttacggctgg
ccagccgtggctcgaggatgcaacaccgtaatcgtctcccacaacgctgaccggccactc
agctacctcaccccgctcctcacccacatcctcctcaactccatcttcacctcccccacc
tccagctcagggcccatagcggtgctgctctgtccaggctgggagaaggtgcaggcagtg
tacgacctgctggaggagagtaaagtcgcccacatcctccaccccgtcagcgtgctgctg
ggcatcggcaaggacgaggccagggccgtcaagatccctaaaaactgcctgctgttagtg
accactcctttctccctggtccgtctgctgtcttgtcactgcttcctgttcctccggctg
taccacctgctgctggacgaggctgaccagctctttgctctcgctcccgacgagatgacg
accatcttgcagcatttccagaaagtgacttccagcgagcagaaagcttcctgtcctcag
cagctggttgccatggcgaaaagatggaccagtcacatggagggtttgttagccaatcac
atgccgtacccctgcgttgtcataactgtccctgaagaagctgctctctatgggaacgtt
cagcaggtcatcctcatgactctggagagcagtaagatctcagtgctgttgggtgcactc
gatttcaacaccgatgttggccagaagactctgattgtagcgaactcggttcaggaggtt
gaagacgtgttcaaggctgtgagcaacaaatcagctttctgcctcaagacccacgagggg
ttaactcaccagttcgacttcgtcatccagcagtggaggaaagacatcggccccggcact
catgttattctggtgaccaccaacgagtgtctgaagtgtctgggcatcagagatgctact
tgtgtcgtccactacggtttccccacttctcccaaactgttcggcagccgactcttctgc
atggctgcgaacttccgaaacctctcagaacgacatcaaacggagagctgccctcgtgtc
accagatcagtgctgctgatctcggagaggaacgcccgccatattgttggcgtgctgcga
tacctgggacggtccgacgccccgctgccctctgagctgctgtccttcgctcagggcgtc
cacgccgcccgggaagaccagaagaccaaccgacctctctgcagctgcctgaagagcctc
ggagtctgcagagacagcagtgtgtgtcccgaccgtcacagattcatttccaagctggat
cagtctgagctccctgcagctggagtcattgaggtcgtcccgctcttcatcaaaacggct
tcggtcttctacggtcggatcgtcaggaaggaggacggcggtttcgacataatggcctct
gagatggcttcttactacgctgacaagaaacctgcagcccaggagctgctggatggaggc
ctgtacgccgtgcaggaggacgaggtcttccacagggtgagggtcctctctgtgcccgac
agaaggggccggctgtttttcagtgtcttcgttcggttcatcgacgtggggaaagaggag
gaggtgaaatcccatcaggtccttcagctgccggagcagtttcactccctgcctggccag
gccgtggagatcatcgtctgccgggtgaagcctgttgatgccgagaccgactggcacccc
aaggtcaccagagcgatcagccagaagatccacggtctgcagcatcgagcccgagcagtt
ctcagtctgggaaacaccgtttttcttgatccgatggtccgactcacccaggtgccaggt
atgaaaactatcatcaatgaatacagcgtgcagtcagagattctgaacacggggatggga
gtcagcaacccggagcatctggagctgctgaaggctctgtgtcaggagggagcggctggc
agcggcaggcaggcgggacacgcgccggcggacggtttgccgtctctggaggtcagaatc
aaagctcaggaagacgttctggctgaagccttcagagtcgccaaagttgggacgctcgct
gatccagaccttcctcacctcgagccatgtgagcctctcaatccatcaacaaaccagaac
ctgctccaagcaccaccagcacctgaactccacccggacccaccttgtgatcagaaatct
cagctggagaagcagactgatgacggacggacaaacagccaccctgctgacctgaagtca
gttgagcagatggagagtttccaccctcaggtccgctggtatcagacgtccgactcggcg
accgtaacggtgaagctgacgaacccggagcgtcagcgctgccacttctaccccgacaga
gtcgtctacagcggcagcgtggacggtcggtcctacagagccgacctgcagctgcaccag
aacatcgcagctgaccgctgctgctgggaaatgaagtccaacgagccggttctgaagctg
gtcaaacagcagcggggacactgggagagattcctcaggaacaagaatatttttgtgagt
tatgacatggagcacattgacgaggaggaagatggagcatcaaacggtgtttggtttgtg
gagaacacaggaaaagacaactggtacgtcaactcagagagcggcagtgagagtgactga
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integrated database retrieval system
