Embiotoca jacksoni (black perch): 138206099
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Entry
138206099 CDS
T10523
Symbol
ddb2
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
KO
K10140
DNA damage-binding protein 2
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja03420
Nucleotide excision repair
eja04115
p53 signaling pathway
eja04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
138206099 (ddb2)
09124 Replication and repair
03420 Nucleotide excision repair
138206099 (ddb2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
138206099 (ddb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
eja04121
]
138206099 (ddb2)
03400 DNA repair and recombination proteins [BR:
eja03400
]
138206099 (ddb2)
Ubiquitin system [BR:
eja04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
138206099 (ddb2)
DNA repair and recombination proteins [BR:
eja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
138206099 (ddb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_RIG_2nd
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_IFT140_1st
WD_LRWD1
WD40_RFWD3
Beta-prop_TEP1_2nd
Beta-prop_Vps41
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
138206099
NCBI-ProteinID:
XP_069018695
LinkDB
All DBs
Position
Unknown
AA seq
496 aa
AA seq
DB search
MSRRPAKSEASESKSKVKKTRAEESAPTTSKKLRDKKDGEKSKAGLPSPVKSAGVQRRGG
YGSILHYIYRSTLGQSLQAQMRQCLQEPFVRSLSSYHLHSVVSAFNRRITCLEWHPTHPT
TLAAASKGGDICLWDYDVPARQTFIQGNGCGDFIGGMKFSIMDLSKVYVASGGGTLTMQS
FEGHTPTLLARTQDCHHDHHNVCFWFCCVDVSVSRQMLVTGDNMGQLLLLGLDGQKIFSD
KLHKAKVTHAEFNSRCDWLLATASVDHTVKLWDLRNIKDKKSFLYDMPHERAVNSAYFNP
LDCSKLLTTDQYDQIRVYSSSDWSKPQHIIQHPHRQFQHLTPIKATWHPSYDLIVAGRYP
DDRVCAGEQRTIDIIDSNTAELVCQLYDPNVAGIKSVNKFSPMGDVIGSGMGVTMLIWDR
NKSLVSDEHELKEETSASVASLRGQRRRQQRSSRARRGPAVGAELKKKIASLEETETKTK
TKSGCTKQKQAQTRKK
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgagcagaagaccagcgaagtcagaagcgtctgaatcaaagagtaaagtgaagaagacg
cgtgcggaagagtcggctccaactacgtccaaaaaactgcgcgacaagaaagatggagaa
aaatcaaaagcagggctcccttctcctgtcaagtccgcaggagtccagaggagaggcggg
tatgggagcatcctgcactatatctacaggagcactctgggccaaagtctgcaggctcag
atgagacagtgtctccaggagcctttcgtccgctctctgtcgtcctatcatttgcacagt
gttgtcagtgccttcaaccgcagaatcacctgtctggagtggcatcccactcatcccacc
actctggctgcagcgtccaaaggtggagacatttgtctgtgggactatgatgtgcccgca
aggcaaacctttattcaggggaacggatgcggagactttatcggagggatgaagttttcc
attatggacctttccaaagtctacgtggcctctggcgggggcacactgaccatgcagagc
tttgagggccacacacccacgctactggccagaactcaagactgtcaccacgatcaccac
aatgtttgtttttggttctgctgtgttgatgtgtctgtaagccgacagatgctggtaaca
ggagacaatatgggacagctcttactgctgggtctcgatggccaaaagattttcagtgac
aagttgcacaaagccaaagtgacccatgcagagttcaactcccgatgcgactggctgctg
gcgacggcatcagttgaccacacggtgaagctttgggacctgaggaacatcaaagacaag
aagagcttcctctacgacatgcctcatgagagagccgtcaactcggcctatttcaaccca
ttggactgctccaagctgctcaccacagatcaatacgaccagatccgcgtctactcgtct
tccgactggtcgaagcctcaacacatcatccagcacccacacagacagtttcagcacctc
acacccatcaaggctacatggcatccttcatatgacctaattgtggcagggcgctaccct
gatgaccgtgtttgtgccggcgaacagaggaccatcgacatcattgactccaacacggcg
gagctcgtatgtcagctgtacgatcccaatgttgcagggatcaaatctgtcaacaaattc
agtccgatgggtgatgtgattggttcgggcatgggtgtaacgatgctcatctgggaccgc
aacaagtctttggtcagtgacgagcacgaactgaaggaggagacctcggcctcagtggcc
agtttgagagggcagcggaggaggcagcagcgctccagcagggcccggaggggtcctgct
gtgggtgcagagctcaagaaaaaaatagcttctctggaggaaactgagaccaaaaccaag
accaagagtgggtgtacgaaacaaaaacaagcacagacgaggaagaagtga
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