Embiotoca jacksoni (black perch): 138206214
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Entry
138206214 CDS
T10523
Symbol
rfwd3
Name
(RefSeq) E3 ubiquitin-protein ligase rfwd3.S
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
eja Embiotoca jacksoni (black perch)
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
eja04121
]
138206214 (rfwd3)
Enzymes [BR:
eja01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138206214 (rfwd3)
Ubiquitin system [BR:
eja04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
138206214 (rfwd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
Beta-prop_WDR5
zf-RING_2
Beta-prop_THOC3
WD40_CDC20-Fz
WD40
zf-C3HC4
EIF3I
zf-C3HC4_2
zf-RING_UBOX
WDR55
Beta-prop_WDR3_1st
WD40_Prp19
zf-rbx1
Beta-prop_EML_2
zf-ANAPC11
Rtf2
zf-RING_5
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
zf-RING_11
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WD40_2
CFAP43_N
zf-C3HC4_4
zf-RING_Vps41
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_IFT122_1st
Beta-prop_EIPR1
NSRP1_N
zf-Nse
Motif
Other DBs
NCBI-GeneID:
138206214
NCBI-ProteinID:
XP_069018882
LinkDB
All DBs
Position
Unknown
AA seq
717 aa
AA seq
DB search
MEAMEVDSPVGVQGGGAIGQPEGGAAGPAADADAPHVISDSGSSTEVDEDEDDDDNEGGR
AAGRPPPRLPATWAFSQWAVGGASATQSTAQGAPIRRRLRQGLRVHYPSQTAAPSRGFPE
FLLRAPAASAAEPGSGSTTEGSDSEDEAQGREESPAAGAEPLDPALPAGLNFNANVQHAQ
PQEAGAANSSSAADGERTEAQNQEVQPTPAAPGPVQSSHGEEGEGDTCTICFEAWTTAGE
HRLSALRCGHLFGYTCIQRWLKAQGLAAKCPQCNKKAKRSDIVLLYAPKLRALDNSEQES
LKKSLEQEQSLRRKAELESAQYRLKLQVVTNKYGQAQQELQELRALMAQTGRSSVPSSST
SLLLGLPQRADSSRTAQYGFSKAVLVSQSGGCRVLSYCEPLSCLLASQPSPHSTLVPGCG
VKKVSVVNMKASQYVPIHSKQIRGLSFNRQNDSLLLSAALDNTIKLTSLLTNTVVQTYNA
GKPVWSCCWCLDNSNYVYAGLSNGSVLIYDTRDTSTHIQELQPLRSRCPVASLCYVPRAA
SSSFPCGGLIAGSLEGACFWEQVNETTYRPHILPLETAGCTDIQVETESRHCLVTYRPGR
SNPSLRCVLMALNRTPQQDSSQLPSCSCSPVQTFSAGSSCKLLTKNAVFRSPDGGGVLVC
AGDEASNSTMVWDASSGTLLQKLPADLPVLDISSFSVNGEHFLASLTEKMLKLYRWE
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggaggccatggaggtagactctcctgtgggggtgcagggaggaggagccatcgggcag
ccggagggcggcgctgcaggtccggctgcggacgccgacgcgccacacgtcatctcggac
tcgggcagcagcaccgaggtggacgaggacgaagacgatgatgacaatgaaggaggacgc
gcggcgggtcggccgcctcccaggcttcctgccacctgggcgttcagtcagtgggcggtg
ggcggagcttcagccacacagtccacagctcagggagcgcccatacggaggagactcaga
cagggcctccgggtgcactaccccagccagaccgccgcaccctccagaggtttcccagag
ttcctgctccgagcgccggctgccagcgcggcagagcccgggtccggcagcaccaccgag
ggcagcgactctgaggatgaggcgcaggggagggaggaaagcccggctgctggcgccgag
cccctcgacccggcactgcccgctgggctgaacttcaacgccaacgtccaacacgctcaa
ccgcaggaagccggtgcagccaactccagttcagctgcagacggtgagaggacagaagct
caaaaccaggaagtccagccgacgccggccgccccgggtccggtccagtcctcccacggc
gaggagggcgaaggcgacacctgcaccatctgcttcgaggcgtggacgaccgccggcgag
caccggctgtcggctctgcgctgcggacacctcttcggctacacctgcatccagcgctgg
ctgaaagctcagggcctcgcggccaaatgtccccagtgcaacaagaaagcgaagcgttca
gacatcgtgctgctgtacgctccgaagctgagagctctggacaactctgagcaggagagc
ttgaagaaatctctggagcaggagcagtctctgaggaggaaagctgaactggagtcggct
cagtacagactcaaactgcaggttgtcaccaacaaatatggacaagcacaacaagagctg
caggagctccgggccctgatggctcagaccggcaggagctccgtcccctcctcgtcgacc
tccctcctccttggtcttcctcagagggccgacagctccaggacggctcagtacggcttc
tccaaggcggtgctggtgtctcagtccggaggctgcagggttttatcctactgtgaacct
ctgagctgcctgctggcctcgcagccttctcctcactccacgctggtgcctggttgcggg
gtgaagaaggtgagcgtggtgaacatgaaggcgagtcagtacgttcccatccacagcaaa
cagatccgaggtctgtccttcaacagacagaacgacagcctgctgctgtcggccgccctc
gacaacaccatcaagctgaccagtctgctgaccaacaccgtggttcagacctataatgca
ggtaaaccggtgtggagctgctgttggtgtttggacaacagtaactacgtctacgccggc
ctgagcaacggctcggtgctcatctacgacaccagagacaccagcactcacatccaggag
ctgcagccgctccgctccaggtgtccggtggcgtctctttgctacgtcccgcgggcggcg
tccagctccttcccgtgcggcgggctgatcgccggctctctggagggcgcttgtttctgg
gagcaggtgaacgagaccacctacaggccgcacatcctgccgctggagaccgccggctgc
accgacatccaggtggagacggagagccgacactgcctcgtcacgtaccggccagggcgc
tccaacccgtctctgcgctgcgtcctgatggctctgaaccggaccccccagcaggactcc
agccagctgcccagctgctcctgctcaccggtgcagacgttcagcgccggctcctcctgc
aaactgctcaccaagaacgccgtgttcaggagtccagacggaggcggggtgctggtgtgt
gccggggacgaggcctccaactccaccatggtgtgggacgccagcagcggaacgctgctc
cagaaactcccggccgacctcccggtgttggacatcagttcgttctcggtgaacggcgag
cacttcctggcttcgctcaccgagaagatgctgaagctctacaggtgggagtga
DBGET
integrated database retrieval system
