Embiotoca jacksoni (black perch): 138206858
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Entry
138206858 CDS
T10523
Symbol
rc3h2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
eja Embiotoca jacksoni (black perch)
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eja03000
]
138206858 (rc3h2)
04121 Ubiquitin system [BR:
eja04121
]
138206858 (rc3h2)
Transcription factors [BR:
eja03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
138206858 (rc3h2)
Ubiquitin system [BR:
eja04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
138206858 (rc3h2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
zf_CCCH_4
Prok-RING_4
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
138206858
NCBI-ProteinID:
XP_069019822
LinkDB
All DBs
Position
Unknown
AA seq
1155 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDSSGHQPISLGCSHTVCKTCLHKLHRKACPFDQTPISTD
IDLLPVNCALLQLVGAQVPDVPPVSLSSAAEVEHYEVCRVCVEELALYLKPISGAKGVAT
LSPSVLSRPMQRKLVTLVNCQLVEEEGRVRAVRAGRSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEDALKLVLLALEDGSALSRKVLVLFVVQKLEARFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLVHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLTSLRPHLELLANI
DHNPDAPTPSWQELESVMLAVKLVVHGLVEFIQNFSKKSHDTPQPQANSKYKTSMCRDLR
QQGGCPRGTNCTFAHTQDELEKFRLRNKKSSSVSRAFPLAPGVMNKTFTMEGSIHTDVSA
GVGPGLKGSWESTATMAEGVSGLAHPQLISRGADMMEDMKRAVPNGTSGSNGLSGTNRTP
SGSTEQKPISPPRTPVSHSSAASPLTTVGRADGSAPLPKHGQFILRAPHPSQASELYYQE
PHSAYDAAHYPPTSGSYYPSTLHPPHKHCMARFLRSSNVPESSLPPSVGPPPSSYSNDPQ
TSHPPSSSSSGYPPHPPHPPRDRMGPPAFHHHPGQPQYGPLAPAHGVYAPLYDSRRVWRP
QLYHREDARSNSLPPEVLHSSVYQPPLRERFNSLDSNYCSGAEHRAGLHRDYGRVPLGYE
DLFRRKQEQWAHHHHHHNANRPSQSSPIFTIDFGTEHAESSGGQCVGCRFRGEESLAHYS
PWSCGTIGPCLSPFEPETLTHTSAHSCSEHSELDSNVGGGGGVSSSSVGKRWLHSLDHYR
RLKDEDPIIPFSEGPIISKWGAISRASRTGYHTTGPVQATACQGSASTTPINFKDYNPHL
DHSDYRWSSRGSDSSSHSSFLESEQLCASELHARRTSIGSGEKIVSDLQAHHSAFSQDRD
RAESEPEPDRDIELELCALDMEDSDHQEIKSQESLDLATPQSQDASHLLRPPCSSPLLSS
PVEDHPQTEGLSTEKMDAHLLKKMAFRKSLSPGGLVSGGLGIGKLVLRTGPPRLGDTSNR
ACPKTPGTEMLLNGN
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgcaggcggcccagtggacagagttcctgtcctgtcccatctgctacaacgag
tttgacagcagcggccaccagcccatcagcctgggatgctcccacacggtgtgcaagacc
tgcctgcacaagctgcaccgcaaggcctgcccctttgatcagacaccaatcagcaccgat
atcgacctgctgccggtcaactgcgccctgctgcagctggttggagctcaggtcccagat
gttccgccggtgagcctgagcagtgcagcagaggttgaacactatgaggtgtgcagggtg
tgtgtagaagagctggctctctacctaaaacccatcagcggagcaaaaggtgtggcgacc
ctgagtccgagtgtgctcagtaggcccatgcagaggaagctggtgaccttggtgaactgc
cagctggtggaggaggagggtcgtgtgcgggcggtgcgggcaggccggtccctgggggaa
cgcacggtaactgagctcatcctgcagcaccagaacccccagcaattgtccgccaacctc
tgggcagcggtgagggcgcgtggctgccagtttctgggacctgctatgcaagaagatgca
ctgaagctagttttactggcgttggaggatgggtcagctctgtccaggaaggtgttggtt
ttgtttgtcgtccagaagctcgaggctcggttcccccaggcttccaaaaccagcataggc
cacgtggtgcagctgctctacagggcctcttgcttcaaggtgactaagcgggatgaggac
tcctcactgatgcagctgaaggaagagttccgaacatacgaggctctgaggagagaacac
gacgctcagatcgtccacatcgcaatggaggccggtctacgcatctcacccgagcagtgg
tcctctctgttgtacggagacctggtccacaagtcacatatgcagtccatcattgacaag
ctgcagtccccggagtcatttgcaaagagcgtccaggagctgacaatcgttctgcagagg
acaggagaccctgccaacctcacaagccttagaccacacttggaactacttgccaacata
gaccacaacccagatgctcccacaccatcatggcaggagctggagagtgtgatgctggct
gtaaaattggtggttcatggactggtggaattcatacagaacttcagcaagaagagccac
gacactccacagcctcaggccaacagcaagtataagaccagcatgtgcagagatcttcgt
cagcagggaggctgtcccagaggaaccaactgtacttttgcacacacgcaagatgagttg
gagaaattcagactgaggaacaagaagagcagcagtgtgagtcgtgcgttccctttagcc
ccgggtgtcatgaataaaaccttcaccatggagggcagcatccacactgatgtgtctgct
ggagttgggccggggctcaaaggctcctgggagagcacagccaccatggcagaaggagtt
tccggcctggctcacccccagctgatctccagaggagccgacatgatggaagacatgaag
agagctgtgcctaatggaaccagcgggtccaacgggttgtctggcaccaacagaacgccg
tcagggtcaacagagcagaagcccatctctcctcccaggactcccgtcagccactcatca
gcggcgtcacccttgaccacagttgggcgggctgacggtagtgctcctttacccaaacat
ggtcagttcattctgcgtgcaccgcatccatctcaggcgtcagagctgtactaccaggag
ccccactctgcatatgatgcagcccactatccaccaacctcaggttcctactacccatca
actcttcatcctcctcacaaacattgtatggctcgcttcctccgatcctccaatgtccca
gaatcctctctgccaccttctgttggccctccgccatcttcttattcaaacgaccctcaa
acgtcacacccaccttcttcctcttcctcgggttacccaccccacccaccgcacccgcct
agggatcggatgggacctcctgccttccatcaccacccgggacagcctcagtatgggccc
ctggcccctgctcatggtgtttacgctcccctctatgacagcaggagagtatggaggcct
cagctgtaccacagagaggatgccaggagtaactcactgcctccagaggtgctgcattcc
tctgtctaccagcctccactcagggagagattcaactctctagacagcaactactgttca
ggagccgaacaccgcgcagggctgcacagggactacggacgtgttcctctgggctatgag
gatctgttcaggaggaagcaggagcagtgggctcatcatcaccaccatcacaatgccaac
aggccctcccagtcttcccccatcttcaccatcgactttggaacagagcatgcggaaagt
agcggaggtcagtgcgtgggatgcaggttcagaggcgaggaaagtctagcgcactactct
ccgtggtcctgtggtaccatcggcccctgcctcagcccattcgagcctgaaacactcaca
cacacctcggctcactcctgctcagagcactcggagttggacagtaatgttggtggaggt
ggtggcgttagcagtagcagtgtcgggaagcgatggctgcattctctggatcactacaga
cgcttgaaagacgaggacccgatcattcccttcagtgaggggcccattatctcgaagtgg
ggtgccatttccagggcgtctcgcacaggctaccacaccaccggccctgtccaggccacg
gcctgtcagggcagtgccagcaccacacccatcaacttcaaagattacaaccctcacctg
gatcacagtgactacaggtggagctccagaggatcagactcttccagccactctagtttc
ctggagagtgagcagctttgtgcgtcggagctgcatgcccgtcgaacttcaataggcagt
ggagagaaaattgtgtctgatctgcaagcccatcatagcgccttcagccaggatcgggac
cgggccgagagtgaaccggagccagaccgagacattgagctggaactgtgcgctctggac
atggaggattcagaccaccaggagatcaaatctcaggagtctttagatctggctacccca
cagtctcaggatgcttcccacctcctccgtcctccctgctcatctcccctcctctcatcc
cctgtagaggaccacccccaaacagagggtctttcaacagaaaagatggatgctcacctg
ctgaaaaagatggccttcaggaaatctctgtctccaggagggttagtctcaggaggtctg
ggcattgggaagctggtgctccggactggacctcctcgactgggcgacacgtccaaccgg
gcttgtcctaaaacgcctgggacagagatgctgctcaatggaaactaa
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