Embiotoca jacksoni (black perch): 138207621
Help
Entry
138207621 CDS
T10523
Symbol
dcp1b
Name
(RefSeq) mRNA-decapping enzyme 1B
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
eja Embiotoca jacksoni (black perch)
Pathway
eja03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138207621 (dcp1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eja03019
]
138207621 (dcp1b)
Messenger RNA biogenesis [BR:
eja03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
138207621 (dcp1b)
mRNA degradation factors
5'-3' decay
Decapping complex
138207621 (dcp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
138207621
NCBI-ProteinID:
XP_069021090
LinkDB
All DBs
Position
Unknown
AA seq
706 aa
AA seq
DB search
MTATSAGCLGAKGLDISLAALQRQDPYINNIVDVASQVALYTYNNRANEWEKTEVEGTLF
IYTRLASPRHGFTIMNRLSMENLTEPITKDLDFQLQDPFLLYRNARLVIHGIWFYDKEDC
RRIAQRMKILTQQEQVLAQSQGGWLSPGGGGGIVTALGGGIVTAGGGGVVTAGGGRLVTA
GGGEGGRGGGGGGSEAKAVDIIQMLTKARTEYDKDAQNHRRPSEKSTSEPKEIGGSSVLC
GNPNLIKPIPVKPNSQDSEGAEPKSLSLATLFGSQHQHHHSPKSDTAPTIVSSAGKVVRL
PVARTLTYDDTLNSGRGVTSNGGNVALTGSSDGGIRVVVGKQAGNVVAGLLPSLTTAHQQ
QPTQQQQHCPAIAKLMQGQRGVGAVLHTVSESPENRLCDNGVPLEHHHHHHHLHHHHQQQ
QQQHHHHHHQQFQPDPIQRLFQTQPPPLPATSFSSPAPPCCSNPPHLQQSPHLSSVSCSH
LQAQQSQQLFFSLSKSQAEAQHNSQTSSASQGTALPGFLPSQVTNDRVIQPPQGLSSQMT
GVVSPHELLQKLQLVQQEQSLASHEPPRLCPGLAPRFLAPTQNQGAGSVLGTVPNPTTAT
AGQKAALQFQVISPQRIPATVAPTLLLSPSVFIQTKSSAGLSAAALESCAAPSALSRPPL
QEEIGVLSRSQLQATLLHLIQSDSSFLDSIYKAYVSRFAKDSSSKY
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgacagcgacttcagccggctgcctcggtgccaaaggactggacataagtctggctgct
ctgcagcgacaggacccgtacatcaacaacatcgtggacgtcgccagccaagtcgccctg
tacacttataacaacagggcgaatgagtgggagaaaacagaagtggaaggaacccttttt
atctacacgaggctggcatctcccaggcacggtttcaccattatgaaccgactcagcatg
gaaaatctgacagagcccatcacaaaagacctggatttccaactccaggaccccttcctg
ctttaccgcaatgcacgattggttatccacggaatttggttctacgataaggaggactgt
cgacgcatcgcccagaggatgaagattctgacccagcaggagcaggtcctggctcagtcc
cagggtggttggctgtccccaggaggaggaggaggaatagtaactgctttaggaggagga
atagtaactgctggaggaggaggagtagtaactgctggaggaggaagactggtaactgct
ggaggaggagaaggaggaagaggaggaggaggaggaggaagtgaagccaaggccgtagac
atcatccagatgttaactaaagcacgcaccgagtatgacaaggatgcacaaaatcaccgc
agaccttctgagaagtctacctcagaaccaaaggagattggcggcagcagtgttctatgt
ggaaaccccaacctgatcaaaccaatacccgttaaacccaactctcaggacagtgaaggt
gctgaacctaagtctctctctttggccaccctgtttggttcccaacatcagcatcaccac
tcacctaaatctgacactgctcccacaatagtgtcatcagcaggaaaagtggttcgccta
cctgtagcccgcacactgacctacgacgatacactgaactctggcagaggtgtgacctcc
aacggcgggaatgttgccctcactgggagttcagatggaggtatccgggttgtagttggg
aaacaggccgggaatgttgttgcggggttgctgccgagtctcaccaccgctcatcagcag
cagcccacccagcagcagcagcactgccccgccatcgccaagctcatgcagggtcagaga
ggtgtgggagcggtgcttcacaccgtctctgagtcccccgagaaccggttgtgcgacaac
ggggtgccgctggagcaccaccaccaccatcatcatcttcatcatcaccatcagcagcag
cagcagcagcatcaccatcatcaccatcaacagtttcaaccggacccgatccagagactt
ttccaaacccagccacctcctctacccgccacctccttctcctctcccgctcctccttgt
tgctccaacccacctcatctgcagcagagccctcatctctcttctgtttcatgttcccac
cttcaagcacaacaaagccagcagctgtttttcagcctttctaagtctcaagcagaagca
caacacaacagccagacatcttcagcttcacagggaacagctttaccaggtttcttgcca
tctcaggtgaccaatgatcgagtcattcaacctccacaaggtctgtcttcccagatgacg
ggtgtggtgtcacctcatgagctcctccaaaagctccagttggtccaacaggaacagagc
ctggcttctcatgagccgcctcggctctgtccgggactggcccctcgattcctggcgccc
acccaaaatcaaggtgcaggctcagttttaggcacagtcccaaacccgaccacagccacc
gcaggtcaaaaagctgcgctgcaattccaggtcatctccccccagcggataccggccact
gtggcccccactctgctcctctctcccagtgtgttcattcagacaaagtctagcgccggg
ttgtcagcggcggctctggagagctgcgctgccccgtcagccctgtccagacccccgctg
caggaggagatcggagttctttccagaagccagcttcaagccacactgctgcatctgatc
cagagtgacagctcattcctggactcaatctataaagcctacgtcagccgctttgctaag
gactccagcagcaagtactga
DBGET
integrated database retrieval system
