Embiotoca jacksoni (black perch): 138208167
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Entry
138208167 CDS
T10523
Symbol
pcdh18a
Name
(RefSeq) protocadherin-18a isoform X1
KO
K16499
protocadherin delta 2
Organism
eja Embiotoca jacksoni (black perch)
Brite
KEGG Orthology (KO) [BR:
eja00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
eja04515
]
138208167 (pcdh18a)
Cell adhesion molecules [BR:
eja04515
]
Cadherins
Protocadherins
138208167 (pcdh18a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
TMEM154
Protocadherin
MpPF26
Cadherin_C_2
Syndecan
G1_gp67_N
Calici_coat_C
Motif
Other DBs
NCBI-GeneID:
138208167
NCBI-ProteinID:
XP_069021991
LinkDB
All DBs
Position
Unknown
AA seq
1018 aa
AA seq
DB search
MQPGNMKGILLWKVVAVLLLATQHVSCKTLKYQVYEEQKVGTVIARLRDDVADVLVKLPS
SVSLRFRAMQRGSSSFLTVREQDGEISIRTKIDREKLCEKNLNCSIQFDVLTLPTEHLQL
FHVEVEVLDINDNAPQFARALIPIEISESAAVGARIPLDSATDPDVGENSLYTYALEPNN
FFKIDIQSRTDGVKYAELVVLRELDREVRSSYELQYTASDRGVPPKTGSTLLKISVSDSN
DNSPIFDKSSYVINLPENSPVGTMIIDLNATDADDGTNAKIVYSFSSHVSPKIMETFKIN
PDSGHLTLIRRVDYETVNSYDIDVQAQDMGPNSMPAHCKILVKVVDVNDNKPDISINLMS
SQGNGDAAYISEASPLDTFVALVRVEDLDSGMNGEVECKLHGQGYFKLQKTYENNYMILT
NVSLDREKRSEFSLTVVAEDRGTPSLSTVKHFTVHVTDENDNPPRFEKGRYEIFKSENNA
PGAYLTSIMATDPDLDANGQVSYSILENSVHGSSISTYVTIDPSNGAIYALRTFDREDVS
RISFVVQAKDAGKPPLLSNATVILNILDENDNPPVIVVPQLWNFTADVPVSKFTEAGHLV
TVVRATDRDTGVNAELICSIVSGNEEGFFLIDPRTCEIHANASLENFPHEHADLAVVVRD
QGSESLSAKAVLKITLYENMENHVQPMDQGESALDASLIIIISLGAICAVLLVIMVVFAA
RCNREKKDTRHSYNCRVAESTHQHHPKKPSRQIHKGDITLVPTVNGTLPIRAHHRSPSDT
PPMDRAQMGSRQNHHSRQSLNSLVTISSNHIPESFALELAHATPPVEQVSQLLSMLHQGQ
YQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDCDMGRESPVDRLLLGEGF
PDLMHLEMHHRLHPAMRLCTDECRVLGHSDQCWMPPLSSPASSADYRNNMYIPGEESSQQ
PQIDDDQSSVDSERRKSFSTFGKESGSEEAGAGVVNSGGGGGGGGGGGGGGGGGGGGG
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgcagccaggaaacatgaagggaatccttctgtggaaagttgtggctgttttgttactg
gcgacgcaacacgtctcctgtaagaccctgaaatatcaggtttacgaggagcagaaggtt
ggcacggtcatcgcccgtttgagagatgatgtcgcggatgttctggttaaacttccgagc
tccgtgtcgctgcgcttcagagctatgcaacgggggagctcgtcattcctcactgtgcgc
gagcaggacggagaaatcagcatcaggaccaaaattgatcgtgagaaactctgcgagaag
aatctcaactgctccatccaattcgacgtcctgacgctccccacggagcacctgcagctg
tttcacgtcgaggtggaagtgctggacattaacgacaacgcgccccagttcgcccgcgcc
ctcatccccatcgagatctccgagagcgcggcagtgggagcgcgcattccgctggacagc
gccacggaccccgatgtcggggagaactcactgtacacgtacgccttagagcccaacaac
ttcttcaagatcgacatccagtccaggacggacggggttaaatacgcggagctggtggtg
ctcagggagctggaccgagaggtgcgctccagttatgaacttcaatacacagcctccgac
aggggcgttcccccgaaaacgggttcgaccctcctcaaaatcagtgtttctgactcaaac
gataacagcccgatctttgacaagtcctcatatgtcatcaatctgcccgaaaattcacct
gttggcactatgatcatcgacttgaacgccacggacgcggatgacggcaccaacgccaaa
atagtctactcgttcagcagtcacgtgtctcccaaaataatggagacgtttaaaatcaac
ccggacagcggtcacctgaccctcatccggcgtgtggactatgagaccgtgaactcttat
gacattgatgtgcaggcacaagacatgggtcccaactccatgcccgctcactgcaagatc
ctggtcaaagtggtggacgtgaacgacaacaagcccgacataagcatcaacctcatgtcc
tcccaggggaacggggacgcggcttacatatccgaggcttctcccctggacacgttcgtg
gctctggtgagggtggaggacctggactccgggatgaacggggaggtggagtgcaagctt
cacggtcagggctacttcaaactgcagaaaacgtacgaaaacaactacatgattctgacc
aacgtgtctctggaccgagagaagaggtcagagttcagcctgaccgtggtggcggaggac
cgggggactcccagcctgtccaccgtcaaacacttcacggtgcacgtgaccgacgaaaac
gacaacccgccgcgctttgagaagggtcggtacgagatctttaaatcggagaacaacgcc
cccggagcttatctgacctccatcatggccaccgaccccgacctggacgccaacgggcag
gtgagctactccatcctggagaattctgttcacgggagctccatctccacctacgtcacc
atcgacccctccaatggcgccatctacgcgctgcgcacgtttgatcgcgaggacgtgagt
cgcatctcgtttgtcgtgcaagccaaagacgcagggaagcccccactgctcagcaacgcc
acggtcatcctgaacatcctggacgaaaacgacaacccgccggtcatcgtggtgccgcag
ctgtggaacttcaccgcagatgttcccgtgtcgaagttcacggaggctggacacttggtg
actgtcgtcagggcgaccgaccgggacacgggggtcaacgccgagctcatctgctccatc
gtcagtggcaacgaggagggattcttcctcatcgacccgagaacgtgcgagatccacgcc
aacgccagtctggagaacttcccccacgagcacgccgacctggcggtggtggtccgagat
cagggcagcgagagcctcagcgccaaggccgtcctgaagatcaccctgtacgagaacatg
gagaaccacgtgcagccgatggaccagggggagtcggccctggacgcgtccctcatcatt
atcatctccctgggggccatctgcgccgtgcttctggtcatcatggtggtgttcgccgcc
cgctgcaaccgcgagaagaaggacacgcggcactcgtacaactgccgggtggccgagtcc
acccaccagcaccacccgaagaagccgtcgcgtcaaatccacaagggcgacatcaccctg
gttcccacggtgaacggcacgctgccaatcagggctcaccaccgctcgccttcggacacg
ccccccatggaccgagcccagatggggagtcggcagaaccaccacagccgccagtccctc
aacagcctggtgacgatctcgtccaatcacattccagagagcttcgccctggagctggcg
cacgcaactccaccagtggagcaagtctcacagcttctgtccatgctccatcagggccag
taccagcccagacccagtttccgtggcaacaaatactcccgcagctacaggtatgcatta
caagacatggacaagttcagcctgaaggacagtggccgtggggacagcgaggcgggggac
agtgactgtgacatggggcgggagtcccccgtggacagactgctgctgggggagggcttc
cctgacctcatgcacctggaaatgcaccatcgactccacccagctatgagactgtgcacg
gatgaatgtcgcgtcctgggacactctgaccagtgctggatgccccccctctcctcgccc
gcttcctccgccgactaccgcaacaacatgtacatccccggggaggagtcctcccagcag
ccgcagatcgacgacgaccagtcctccgtcgactcggagcgccgcaagagcttctccact
tttggcaaggagtctgggagcgaggaggcgggggccggagtggtgaactccggaggagga
ggaggaggaggaggaggaggaggaggaggaggaggaggaggcggtggaggggggtga
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